RNA–Protein interactions for RNA: ENST00000549119.1

RNF41-207, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-207ENST00000549119 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
RNF41-207ENST00000549119 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
RNF41-207ENST00000549119 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
RNF41-207ENST00000549119 ABCC9O60706 1549 aa17.46■□□□□ 0.39
RNF41-207ENST00000549119 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
RNF41-207ENST00000549119 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
RNF41-207ENST00000549119 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
RNF41-207ENST00000549119 NACADO15069 1562 aa17.16■□□□□ 0.34
RNF41-207ENST00000549119 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
RNF41-207ENST00000549119 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
RNF41-207ENST00000549119 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
RNF41-207ENST00000549119 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
RNF41-207ENST00000549119 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
RNF41-207ENST00000549119 BICRAQ9NZM4 1560 aa16.44■□□□□ 0.22
RNF41-207ENST00000549119 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
RNF41-207ENST00000549119 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
RNF41-207ENST00000549119 CECR2Q9BXF3 1484 aa16.29■□□□□ 0.2
RNF41-207ENST00000549119 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
RNF41-207ENST00000549119 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
RNF41-207ENST00000549119 MROH2BQ7Z745 1585 aa16.19■□□□□ 0.18
RNF41-207ENST00000549119 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
RNF41-207ENST00000549119 WIZO95785 1651 aa16.02■□□□□ 0.16
RNF41-207ENST00000549119 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
RNF41-207ENST00000549119 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.15
RNF41-207ENST00000549119 SMARCA2P51531 1590 aa15.95■□□□□ 0.14
RNF41-207ENST00000549119 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
RNF41-207ENST00000549119 TOP2AP11388 1531 aaKnown RBP15.91■□□□□ 0.14
RNF41-207ENST00000549119 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
RNF41-207ENST00000549119 NCAPD3P42695 1498 aa15.84■□□□□ 0.13
RNF41-207ENST00000549119 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
RNF41-207ENST00000549119 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
RNF41-207ENST00000549119 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
RNF41-207ENST00000549119 CHIC1Q5VXU3 224 aa15.62■□□□□ 0.09
RNF41-207ENST00000549119 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
RNF41-207ENST00000549119 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
RNF41-207ENST00000549119 CFTRP13569 1480 aa15.45■□□□□ 0.06
RNF41-207ENST00000549119 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
RNF41-207ENST00000549119 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
RNF41-207ENST00000549119 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
RNF41-207ENST00000549119 PRDM2Q13029 1718 aa15.28■□□□□ 0.04
RNF41-207ENST00000549119 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.04
RNF41-207ENST00000549119 NESP48681 1621 aa15.25■□□□□ 0.03
RNF41-207ENST00000549119 PDS5BQ9NTI5 1447 aa15.25■□□□□ 0.03
RNF41-207ENST00000549119 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
RNF41-207ENST00000549119 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
RNF41-207ENST00000549119 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
RNF41-207ENST00000549119 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
RNF41-207ENST00000549119 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
RNF41-207ENST00000549119 CUX1P39880 1505 aa15.14■□□□□ 0.01
RNF41-207ENST00000549119 FAM9AQ8IZU1 332 aaPredicted RBP15.12■□□□□ 0.01
RNF41-207ENST00000549119 EEA1Q15075 1411 aa15.09■□□□□ 0.01
RNF41-207ENST00000549119 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
RNF41-207ENST00000549119 SOGA1O94964 1423 aa15.06■□□□□ 0
RNF41-207ENST00000549119 TOPBP1Q92547 1522 aa15.06■□□□□ 0
RNF41-207ENST00000549119 KIF21AQ7Z4S6 1674 aa15.04■□□□□ -0
RNF41-207ENST00000549119 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
RNF41-207ENST00000549119 URB2Q14146 1524 aaKnown RBP15.02■□□□□ -0
RNF41-207ENST00000549119 ERCC6Q03468 1493 aa15.02■□□□□ -0
RNF41-207ENST00000549119 FGD5Q6ZNL6 1462 aa15.02■□□□□ -0
RNF41-207ENST00000549119 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
RNF41-207ENST00000549119 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
RNF41-207ENST00000549119 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
RNF41-207ENST00000549119 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
RNF41-207ENST00000549119 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
RNF41-207ENST00000549119 CUX2O14529 1486 aa14.93□□□□□ -0.02
RNF41-207ENST00000549119 WDR62O43379 1518 aa14.91□□□□□ -0.02
RNF41-207ENST00000549119 ABCA10Q8WWZ4 1543 aa14.91□□□□□ -0.02
RNF41-207ENST00000549119 RAD54L2Q9Y4B4 1467 aa14.9□□□□□ -0.02
RNF41-207ENST00000549119 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
RNF41-207ENST00000549119 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
RNF41-207ENST00000549119 GOLGA3Q08378 1498 aa14.84□□□□□ -0.03
RNF41-207ENST00000549119 IGF1RP08069 1367 aa14.84□□□□□ -0.03
RNF41-207ENST00000549119 IFT140Q96RY7 1462 aa14.83□□□□□ -0.03
RNF41-207ENST00000549119 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
RNF41-207ENST00000549119 KIF21BO75037 1637 aa14.82□□□□□ -0.04
RNF41-207ENST00000549119 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
RNF41-207ENST00000549119 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
RNF41-207ENST00000549119 PRXQ9BXM0 1461 aa14.8□□□□□ -0.04
RNF41-207ENST00000549119 TARBP1Q13395 1621 aaKnown RBP14.79□□□□□ -0.04
RNF41-207ENST00000549119 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
RNF41-207ENST00000549119 GAPVD1Q14C86 1478 aa14.77□□□□□ -0.04
RNF41-207ENST00000549119 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
RNF41-207ENST00000549119 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
RNF41-207ENST00000549119 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
RNF41-207ENST00000549119 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
RNF41-207ENST00000549119 AQRO60306 1485 aaKnown RBP eCLIP14.71□□□□□ -0.05
RNF41-207ENST00000549119 CUL7Q14999 1698 aa14.7□□□□□ -0.06
RNF41-207ENST00000549119 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
RNF41-207ENST00000549119 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
RNF41-207ENST00000549119 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
RNF41-207ENST00000549119 FHAD1B1AJZ9 1412 aa14.64□□□□□ -0.07
RNF41-207ENST00000549119 PBRM1Q86U86 1689 aa14.62□□□□□ -0.07
RNF41-207ENST00000549119 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
RNF41-207ENST00000549119 CLIP1P30622 1438 aa14.59□□□□□ -0.07
RNF41-207ENST00000549119 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
RNF41-207ENST00000549119 MAGI1Q96QZ7 1491 aaPredicted RBP14.57□□□□□ -0.08
RNF41-207ENST00000549119 ADAMTS12P58397 1594 aa14.56□□□□□ -0.08
RNF41-207ENST00000549119 RANGAP1P46060 587 aaPredicted RBP14.56□□□□□ -0.08
RNF41-207ENST00000549119 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
RNF41-207ENST00000549119 SYNJ2O15056 1496 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms