RNA–Protein interactions for RNA: ENST00000549055.1

AC023511.1-201, humanhuman

TSL 3 BASIC

Gene AC023511.1, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023511.1-201ENST00000549055 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
AC023511.1-201ENST00000549055 ABCC9O60706 1549 aa22.04■■□□□ 1.12
AC023511.1-201ENST00000549055 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
AC023511.1-201ENST00000549055 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
AC023511.1-201ENST00000549055 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
AC023511.1-201ENST00000549055 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
AC023511.1-201ENST00000549055 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
AC023511.1-201ENST00000549055 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
AC023511.1-201ENST00000549055 NACADO15069 1562 aa20.35■□□□□ 0.85
AC023511.1-201ENST00000549055 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
AC023511.1-201ENST00000549055 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
AC023511.1-201ENST00000549055 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
AC023511.1-201ENST00000549055 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
AC023511.1-201ENST00000549055 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
AC023511.1-201ENST00000549055 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
AC023511.1-201ENST00000549055 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
AC023511.1-201ENST00000549055 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
AC023511.1-201ENST00000549055 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
AC023511.1-201ENST00000549055 DNAJC5Q9H3Z4 198 aa19.34■□□□□ 0.69
AC023511.1-201ENST00000549055 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
AC023511.1-201ENST00000549055 CUX2O14529 1486 aa18.93■□□□□ 0.62
AC023511.1-201ENST00000549055 NESP48681 1621 aa18.84■□□□□ 0.61
AC023511.1-201ENST00000549055 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
AC023511.1-201ENST00000549055 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
AC023511.1-201ENST00000549055 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
AC023511.1-201ENST00000549055 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
AC023511.1-201ENST00000549055 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
AC023511.1-201ENST00000549055 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
AC023511.1-201ENST00000549055 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
AC023511.1-201ENST00000549055 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
AC023511.1-201ENST00000549055 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
AC023511.1-201ENST00000549055 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
AC023511.1-201ENST00000549055 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
AC023511.1-201ENST00000549055 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
AC023511.1-201ENST00000549055 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
AC023511.1-201ENST00000549055 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
AC023511.1-201ENST00000549055 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
AC023511.1-201ENST00000549055 WIZO95785 1651 aa18.27■□□□□ 0.52
AC023511.1-201ENST00000549055 WDR62O43379 1518 aa18.23■□□□□ 0.51
AC023511.1-201ENST00000549055 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
AC023511.1-201ENST00000549055 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
AC023511.1-201ENST00000549055 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
AC023511.1-201ENST00000549055 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
AC023511.1-201ENST00000549055 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
AC023511.1-201ENST00000549055 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
AC023511.1-201ENST00000549055 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
AC023511.1-201ENST00000549055 URB2Q14146 1524 aaKnown RBP18■□□□□ 0.47
AC023511.1-201ENST00000549055 CFTRP13569 1480 aa17.92■□□□□ 0.46
AC023511.1-201ENST00000549055 PRDM2Q13029 1718 aa17.91■□□□□ 0.46
AC023511.1-201ENST00000549055 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
AC023511.1-201ENST00000549055 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
AC023511.1-201ENST00000549055 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
AC023511.1-201ENST00000549055 CHD1O14646 1710 aa17.81■□□□□ 0.44
AC023511.1-201ENST00000549055 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
AC023511.1-201ENST00000549055 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
AC023511.1-201ENST00000549055 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
AC023511.1-201ENST00000549055 TRHP20396 242 aaPredicted RBP17.75■□□□□ 0.43
AC023511.1-201ENST00000549055 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
AC023511.1-201ENST00000549055 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
AC023511.1-201ENST00000549055 FBLN2P98095 1184 aa17.69■□□□□ 0.42
AC023511.1-201ENST00000549055 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
AC023511.1-201ENST00000549055 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
AC023511.1-201ENST00000549055 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
AC023511.1-201ENST00000549055 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
AC023511.1-201ENST00000549055 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
AC023511.1-201ENST00000549055 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
AC023511.1-201ENST00000549055 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
AC023511.1-201ENST00000549055 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
AC023511.1-201ENST00000549055 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
AC023511.1-201ENST00000549055 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
AC023511.1-201ENST00000549055 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
AC023511.1-201ENST00000549055 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
AC023511.1-201ENST00000549055 SOGA1O94964 1423 aa17.39■□□□□ 0.38
AC023511.1-201ENST00000549055 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
AC023511.1-201ENST00000549055 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
AC023511.1-201ENST00000549055 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
AC023511.1-201ENST00000549055 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
AC023511.1-201ENST00000549055 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
AC023511.1-201ENST00000549055 CUX1P39880 1505 aa17.31■□□□□ 0.36
AC023511.1-201ENST00000549055 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
AC023511.1-201ENST00000549055 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
AC023511.1-201ENST00000549055 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
AC023511.1-201ENST00000549055 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
AC023511.1-201ENST00000549055 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
AC023511.1-201ENST00000549055 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
AC023511.1-201ENST00000549055 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
AC023511.1-201ENST00000549055 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
AC023511.1-201ENST00000549055 ADAMTS12P58397 1594 aa17.09■□□□□ 0.33
AC023511.1-201ENST00000549055 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
AC023511.1-201ENST00000549055 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
AC023511.1-201ENST00000549055 SHROOM2Q13796 1616 aa17■□□□□ 0.31
AC023511.1-201ENST00000549055 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
AC023511.1-201ENST00000549055 NUP160Q12769 1436 aa16.96■□□□□ 0.31
AC023511.1-201ENST00000549055 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
AC023511.1-201ENST00000549055 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
AC023511.1-201ENST00000549055 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
AC023511.1-201ENST00000549055 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
AC023511.1-201ENST00000549055 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
AC023511.1-201ENST00000549055 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
AC023511.1-201ENST00000549055 FAM69CQ0P6D2 419 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms