RNA–Protein interactions for RNA: ENST00000548814.1

GPD1-205, Transcript of glycerol-3-phosphate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene GPD1, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1-205ENST00000548814 NISCHQ9Y2I1 1504 aa33.55■■■□□ 2.96
GPD1-205ENST00000548814 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.39
GPD1-205ENST00000548814 ABCC9O60706 1549 aa29.9■■■□□ 2.38
GPD1-205ENST00000548814 RB1CC1Q8TDY2 1594 aa28.43■■■□□ 2.14
GPD1-205ENST00000548814 NACADO15069 1562 aa28.3■■■□□ 2.12
GPD1-205ENST00000548814 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
GPD1-205ENST00000548814 DNAJC5BQ9UF47 199 aa28.11■■■□□ 2.09
GPD1-205ENST00000548814 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
GPD1-205ENST00000548814 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
GPD1-205ENST00000548814 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.06
GPD1-205ENST00000548814 ZCCHC6Q5VYS8 1495 aaKnown RBP27.84■■■□□ 2.05
GPD1-205ENST00000548814 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
GPD1-205ENST00000548814 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
GPD1-205ENST00000548814 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
GPD1-205ENST00000548814 SHROOM4Q9ULL8 1493 aa27.22■■□□□ 1.95
GPD1-205ENST00000548814 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
GPD1-205ENST00000548814 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
GPD1-205ENST00000548814 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
GPD1-205ENST00000548814 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
GPD1-205ENST00000548814 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
GPD1-205ENST00000548814 SMARCA4P51532 1647 aa26.12■■□□□ 1.77
GPD1-205ENST00000548814 SMARCA2P51531 1590 aa25.97■■□□□ 1.75
GPD1-205ENST00000548814 BAZ1AQ9NRL2 1556 aaPredicted RBP25.96■■□□□ 1.75
GPD1-205ENST00000548814 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
GPD1-205ENST00000548814 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
GPD1-205ENST00000548814 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.74
GPD1-205ENST00000548814 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
GPD1-205ENST00000548814 NESP48681 1621 aa25.79■■□□□ 1.72
GPD1-205ENST00000548814 ERCC6Q03468 1493 aa25.68■■□□□ 1.7
GPD1-205ENST00000548814 CUX2O14529 1486 aa25.64■■□□□ 1.69
GPD1-205ENST00000548814 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
GPD1-205ENST00000548814 WIZO95785 1651 aa25.57■■□□□ 1.68
GPD1-205ENST00000548814 DNAJC5Q9H3Z4 198 aa25.56■■□□□ 1.68
GPD1-205ENST00000548814 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
GPD1-205ENST00000548814 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
GPD1-205ENST00000548814 THOC2Q8NI27 1593 aaKnown RBP25.46■■□□□ 1.67
GPD1-205ENST00000548814 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.66
GPD1-205ENST00000548814 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
GPD1-205ENST00000548814 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
GPD1-205ENST00000548814 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
GPD1-205ENST00000548814 CFTRP13569 1480 aa25.14■■□□□ 1.62
GPD1-205ENST00000548814 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.62
GPD1-205ENST00000548814 WDR62O43379 1518 aa25.12■■□□□ 1.61
GPD1-205ENST00000548814 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.61
GPD1-205ENST00000548814 CEP164Q9UPV0 1460 aa25.04■■□□□ 1.6
GPD1-205ENST00000548814 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
GPD1-205ENST00000548814 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
GPD1-205ENST00000548814 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
GPD1-205ENST00000548814 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
GPD1-205ENST00000548814 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
GPD1-205ENST00000548814 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
GPD1-205ENST00000548814 DNMBPQ6XZF7 1577 aa24.52■■□□□ 1.52
GPD1-205ENST00000548814 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
GPD1-205ENST00000548814 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
GPD1-205ENST00000548814 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
GPD1-205ENST00000548814 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
GPD1-205ENST00000548814 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
GPD1-205ENST00000548814 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
GPD1-205ENST00000548814 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.49
GPD1-205ENST00000548814 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
GPD1-205ENST00000548814 CUX1P39880 1505 aa24.31■■□□□ 1.48
GPD1-205ENST00000548814 SOGA1O94964 1423 aa24.26■■□□□ 1.47
GPD1-205ENST00000548814 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
GPD1-205ENST00000548814 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
GPD1-205ENST00000548814 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
GPD1-205ENST00000548814 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
GPD1-205ENST00000548814 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
GPD1-205ENST00000548814 CHD1O14646 1710 aa24.2■■□□□ 1.46
GPD1-205ENST00000548814 ARHGEF11O15085 1522 aa24.16■■□□□ 1.46
GPD1-205ENST00000548814 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
GPD1-205ENST00000548814 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
GPD1-205ENST00000548814 SYNJ1O43426 1573 aa24.1■■□□□ 1.45
GPD1-205ENST00000548814 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
GPD1-205ENST00000548814 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
GPD1-205ENST00000548814 FBLN2P98095 1184 aa24.07■■□□□ 1.44
GPD1-205ENST00000548814 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
GPD1-205ENST00000548814 TOP2BQ02880 1626 aa24■■□□□ 1.43
GPD1-205ENST00000548814 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
GPD1-205ENST00000548814 MAGI1Q96QZ7 1491 aaPredicted RBP23.99■■□□□ 1.43
GPD1-205ENST00000548814 BIVM-ERCC5R4GMW8 1640 aa23.98■■□□□ 1.43
GPD1-205ENST00000548814 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
GPD1-205ENST00000548814 CLASP1Q7Z460 1538 aa23.97■■□□□ 1.43
GPD1-205ENST00000548814 GAPVD1Q14C86 1478 aa23.96■■□□□ 1.43
GPD1-205ENST00000548814 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
GPD1-205ENST00000548814 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.43
GPD1-205ENST00000548814 PBRM1Q86U86 1689 aa23.93■■□□□ 1.42
GPD1-205ENST00000548814 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
GPD1-205ENST00000548814 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
GPD1-205ENST00000548814 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
GPD1-205ENST00000548814 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
GPD1-205ENST00000548814 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
GPD1-205ENST00000548814 NUP160Q12769 1436 aa23.69■■□□□ 1.38
GPD1-205ENST00000548814 ERCC6L2Q5T890 1561 aa23.68■■□□□ 1.38
GPD1-205ENST00000548814 RUSC2Q8N2Y8 1516 aa23.66■■□□□ 1.38
GPD1-205ENST00000548814 ERICH3Q5RHP9 1530 aa23.65■■□□□ 1.38
GPD1-205ENST00000548814 FHAD1B1AJZ9 1412 aa23.65■■□□□ 1.38
GPD1-205ENST00000548814 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
GPD1-205ENST00000548814 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
GPD1-205ENST00000548814 KIF27Q86VH2 1401 aa23.56■■□□□ 1.36
GPD1-205ENST00000548814 TRHP20396 242 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms