RNA–Protein interactions for RNA: ENST00000548721.1

PPTC7-202, Transcript of PTC7 protein phosphatase homolog, humanhuman

TSL 2

Gene PPTC7, Length 1,471 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPTC7-202ENST00000548721 NISCHQ9Y2I1 1504 aa21.72■■□□□ 1.07
PPTC7-202ENST00000548721 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
PPTC7-202ENST00000548721 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
PPTC7-202ENST00000548721 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
PPTC7-202ENST00000548721 ABCC9O60706 1549 aa18.57■□□□□ 0.56
PPTC7-202ENST00000548721 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
PPTC7-202ENST00000548721 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
PPTC7-202ENST00000548721 NACADO15069 1562 aa17.96■□□□□ 0.46
PPTC7-202ENST00000548721 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.46
PPTC7-202ENST00000548721 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
PPTC7-202ENST00000548721 MYO15BQ96JP2 1530 aa17.85■□□□□ 0.45
PPTC7-202ENST00000548721 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
PPTC7-202ENST00000548721 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
PPTC7-202ENST00000548721 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
PPTC7-202ENST00000548721 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
PPTC7-202ENST00000548721 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
PPTC7-202ENST00000548721 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
PPTC7-202ENST00000548721 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
PPTC7-202ENST00000548721 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
PPTC7-202ENST00000548721 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
PPTC7-202ENST00000548721 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
PPTC7-202ENST00000548721 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
PPTC7-202ENST00000548721 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
PPTC7-202ENST00000548721 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
PPTC7-202ENST00000548721 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
PPTC7-202ENST00000548721 WIZO95785 1651 aa16.68■□□□□ 0.26
PPTC7-202ENST00000548721 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
PPTC7-202ENST00000548721 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
PPTC7-202ENST00000548721 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
PPTC7-202ENST00000548721 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
PPTC7-202ENST00000548721 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
PPTC7-202ENST00000548721 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
PPTC7-202ENST00000548721 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
PPTC7-202ENST00000548721 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
PPTC7-202ENST00000548721 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
PPTC7-202ENST00000548721 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
PPTC7-202ENST00000548721 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
PPTC7-202ENST00000548721 NESP48681 1621 aa16.15■□□□□ 0.18
PPTC7-202ENST00000548721 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
PPTC7-202ENST00000548721 LAMC3Q9Y6N6 1575 aa16.12■□□□□ 0.17
PPTC7-202ENST00000548721 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
PPTC7-202ENST00000548721 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
PPTC7-202ENST00000548721 FOXD1Q16676 465 aa16.06■□□□□ 0.16
PPTC7-202ENST00000548721 KIF21AQ7Z4S6 1674 aa16.04■□□□□ 0.16
PPTC7-202ENST00000548721 CFTRP13569 1480 aa16.03■□□□□ 0.16
PPTC7-202ENST00000548721 ERCC6Q03468 1493 aa16■□□□□ 0.15
PPTC7-202ENST00000548721 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.14
PPTC7-202ENST00000548721 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
PPTC7-202ENST00000548721 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
PPTC7-202ENST00000548721 CUX2O14529 1486 aa15.86■□□□□ 0.13
PPTC7-202ENST00000548721 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
PPTC7-202ENST00000548721 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
PPTC7-202ENST00000548721 MRC2Q9UBG0 1479 aa15.83■□□□□ 0.12
PPTC7-202ENST00000548721 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
PPTC7-202ENST00000548721 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
PPTC7-202ENST00000548721 WDR62O43379 1518 aa15.75■□□□□ 0.11
PPTC7-202ENST00000548721 CUX1P39880 1505 aa15.74■□□□□ 0.11
PPTC7-202ENST00000548721 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
PPTC7-202ENST00000548721 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
PPTC7-202ENST00000548721 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
PPTC7-202ENST00000548721 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
PPTC7-202ENST00000548721 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
PPTC7-202ENST00000548721 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
PPTC7-202ENST00000548721 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
PPTC7-202ENST00000548721 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
PPTC7-202ENST00000548721 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
PPTC7-202ENST00000548721 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
PPTC7-202ENST00000548721 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
PPTC7-202ENST00000548721 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
PPTC7-202ENST00000548721 SOGA1O94964 1423 aa15.53■□□□□ 0.08
PPTC7-202ENST00000548721 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
PPTC7-202ENST00000548721 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
PPTC7-202ENST00000548721 PBRM1Q86U86 1689 aa15.46■□□□□ 0.06
PPTC7-202ENST00000548721 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
PPTC7-202ENST00000548721 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
PPTC7-202ENST00000548721 ADRA2BP18089 450 aa15.43■□□□□ 0.06
PPTC7-202ENST00000548721 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
PPTC7-202ENST00000548721 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
PPTC7-202ENST00000548721 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■■■□ 20.2
PPTC7-202ENST00000548721 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
PPTC7-202ENST00000548721 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
PPTC7-202ENST00000548721 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
PPTC7-202ENST00000548721 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
PPTC7-202ENST00000548721 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
PPTC7-202ENST00000548721 FAM9AQ8IZU1 332 aaPredicted RBP15.32■□□□□ 0.04
PPTC7-202ENST00000548721 ERICH3Q5RHP9 1530 aa15.29■□□□□ 0.04
PPTC7-202ENST00000548721 CHD1O14646 1710 aa15.28■□□□□ 0.04
PPTC7-202ENST00000548721 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
PPTC7-202ENST00000548721 CUL7Q14999 1698 aa15.27■□□□□ 0.04
PPTC7-202ENST00000548721 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
PPTC7-202ENST00000548721 EEA1Q15075 1411 aa15.24■□□□□ 0.03
PPTC7-202ENST00000548721 FBLN2P98095 1184 aa15.21■□□□□ 0.03
PPTC7-202ENST00000548721 IGF1RP08069 1367 aa15.2■□□□□ 0.02
PPTC7-202ENST00000548721 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
PPTC7-202ENST00000548721 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
PPTC7-202ENST00000548721 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
PPTC7-202ENST00000548721 CARMIL1Q5VZK9 1371 aa15.17■□□□□ 0.02
PPTC7-202ENST00000548721 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
PPTC7-202ENST00000548721 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
PPTC7-202ENST00000548721 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms