RNA–Protein interactions for RNA: ENST00000548688.5

HNRNPA1-208, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 3

Gene HNRNPA1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-208ENST00000548688 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
HNRNPA1-208ENST00000548688 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
HNRNPA1-208ENST00000548688 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
HNRNPA1-208ENST00000548688 SENP3Q9H4L4 574 aaPredicted RBP17.37■□□□□ 0.37
HNRNPA1-208ENST00000548688 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
HNRNPA1-208ENST00000548688 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
HNRNPA1-208ENST00000548688 FOXD1Q16676 465 aa16.08■□□□□ 0.16
HNRNPA1-208ENST00000548688 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
HNRNPA1-208ENST00000548688 ABCC9O60706 1549 aa15.57■□□□□ 0.08
HNRNPA1-208ENST00000548688 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
HNRNPA1-208ENST00000548688 ADRA2BP18089 450 aa15.18■□□□□ 0.02
HNRNPA1-208ENST00000548688 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
HNRNPA1-208ENST00000548688 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
HNRNPA1-208ENST00000548688 NACADO15069 1562 aa15.07■□□□□ 0
HNRNPA1-208ENST00000548688 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
HNRNPA1-208ENST00000548688 MSH5O43196 834 aa15.05■□□□□ -0
HNRNPA1-208ENST00000548688 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
HNRNPA1-208ENST00000548688 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
HNRNPA1-208ENST00000548688 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
HNRNPA1-208ENST00000548688 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
HNRNPA1-208ENST00000548688 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
HNRNPA1-208ENST00000548688 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
HNRNPA1-208ENST00000548688 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
HNRNPA1-208ENST00000548688 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
HNRNPA1-208ENST00000548688 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
HNRNPA1-208ENST00000548688 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
HNRNPA1-208ENST00000548688 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
HNRNPA1-208ENST00000548688 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
HNRNPA1-208ENST00000548688 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
HNRNPA1-208ENST00000548688 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
HNRNPA1-208ENST00000548688 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
HNRNPA1-208ENST00000548688 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
HNRNPA1-208ENST00000548688 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
HNRNPA1-208ENST00000548688 PEG3Q9GZU2 1588 aa13.95□□□□□ -0.18
HNRNPA1-208ENST00000548688 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
HNRNPA1-208ENST00000548688 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
HNRNPA1-208ENST00000548688 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
HNRNPA1-208ENST00000548688 HMGXB3Q12766 1538 aa13.87□□□□□ -0.19
HNRNPA1-208ENST00000548688 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
HNRNPA1-208ENST00000548688 WIZO95785 1651 aa13.86□□□□□ -0.19
HNRNPA1-208ENST00000548688 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
HNRNPA1-208ENST00000548688 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
HNRNPA1-208ENST00000548688 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
HNRNPA1-208ENST00000548688 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
HNRNPA1-208ENST00000548688 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
HNRNPA1-208ENST00000548688 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
HNRNPA1-208ENST00000548688 NESP48681 1621 aa13.55□□□□□ -0.24
HNRNPA1-208ENST00000548688 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
HNRNPA1-208ENST00000548688 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
HNRNPA1-208ENST00000548688 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
HNRNPA1-208ENST00000548688 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
HNRNPA1-208ENST00000548688 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
HNRNPA1-208ENST00000548688 CFTRP13569 1480 aa13.46□□□□□ -0.25
HNRNPA1-208ENST00000548688 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
HNRNPA1-208ENST00000548688 KIF21AQ7Z4S6 1674 aa13.42□□□□□ -0.26
HNRNPA1-208ENST00000548688 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
HNRNPA1-208ENST00000548688 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
HNRNPA1-208ENST00000548688 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
HNRNPA1-208ENST00000548688 THOC2Q8NI27 1593 aaKnown RBP13.36□□□□□ -0.27
HNRNPA1-208ENST00000548688 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
HNRNPA1-208ENST00000548688 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
HNRNPA1-208ENST00000548688 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
HNRNPA1-208ENST00000548688 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
HNRNPA1-208ENST00000548688 WDR62O43379 1518 aa13.25□□□□□ -0.29
HNRNPA1-208ENST00000548688 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
HNRNPA1-208ENST00000548688 CUX2O14529 1486 aa13.23□□□□□ -0.29
HNRNPA1-208ENST00000548688 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
HNRNPA1-208ENST00000548688 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
HNRNPA1-208ENST00000548688 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
HNRNPA1-208ENST00000548688 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
HNRNPA1-208ENST00000548688 CUX1P39880 1505 aa13.13□□□□□ -0.31
HNRNPA1-208ENST00000548688 KCNA4P22459 653 aa13.12□□□□□ -0.31
HNRNPA1-208ENST00000548688 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
HNRNPA1-208ENST00000548688 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
HNRNPA1-208ENST00000548688 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
HNRNPA1-208ENST00000548688 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
HNRNPA1-208ENST00000548688 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
HNRNPA1-208ENST00000548688 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
HNRNPA1-208ENST00000548688 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
HNRNPA1-208ENST00000548688 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
HNRNPA1-208ENST00000548688 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
HNRNPA1-208ENST00000548688 WDR97A6NE52 1622 aa13□□□□□ -0.33
HNRNPA1-208ENST00000548688 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
HNRNPA1-208ENST00000548688 RAD54L2Q9Y4B4 1467 aa12.98□□□□□ -0.33
HNRNPA1-208ENST00000548688 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
HNRNPA1-208ENST00000548688 SOGA1O94964 1423 aa12.95□□□□□ -0.34
HNRNPA1-208ENST00000548688 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
HNRNPA1-208ENST00000548688 ABCA5Q8WWZ7 1642 aa12.9□□□□□ -0.34
HNRNPA1-208ENST00000548688 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.354e-13■■■■□ 21.4
HNRNPA1-208ENST00000548688 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
HNRNPA1-208ENST00000548688 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
HNRNPA1-208ENST00000548688 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
HNRNPA1-208ENST00000548688 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
HNRNPA1-208ENST00000548688 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
HNRNPA1-208ENST00000548688 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
HNRNPA1-208ENST00000548688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.364e-8■□□□□ 8.9
HNRNPA1-208ENST00000548688 CHD1O14646 1710 aa12.77□□□□□ -0.36
HNRNPA1-208ENST00000548688 MAGI1Q96QZ7 1491 aaPredicted RBP12.77□□□□□ -0.37
HNRNPA1-208ENST00000548688 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
HNRNPA1-208ENST00000548688 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms