RNA–Protein interactions for RNA: ENST00000548518.1

SLC8B1-205, Transcript of solute carrier family 8 member B1, humanhuman

TSL 4

Gene SLC8B1, Length 664 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-205ENST00000548518 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
SLC8B1-205ENST00000548518 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
SLC8B1-205ENST00000548518 ABCC9O60706 1549 aa24.85■■□□□ 1.57
SLC8B1-205ENST00000548518 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
SLC8B1-205ENST00000548518 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
SLC8B1-205ENST00000548518 NACADO15069 1562 aa23.99■■□□□ 1.43
SLC8B1-205ENST00000548518 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
SLC8B1-205ENST00000548518 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
SLC8B1-205ENST00000548518 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
SLC8B1-205ENST00000548518 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.33
SLC8B1-205ENST00000548518 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
SLC8B1-205ENST00000548518 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
SLC8B1-205ENST00000548518 PABPN1Q86U42 306 aaKnown RBP eCLIP23.23■■□□□ 1.31
SLC8B1-205ENST00000548518 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
SLC8B1-205ENST00000548518 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
SLC8B1-205ENST00000548518 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
SLC8B1-205ENST00000548518 EIF4G1Q04637 1599 aaKnown RBP22.6■■□□□ 1.21
SLC8B1-205ENST00000548518 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
SLC8B1-205ENST00000548518 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
SLC8B1-205ENST00000548518 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
SLC8B1-205ENST00000548518 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
SLC8B1-205ENST00000548518 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
SLC8B1-205ENST00000548518 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
SLC8B1-205ENST00000548518 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
SLC8B1-205ENST00000548518 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
SLC8B1-205ENST00000548518 NCAPD3P42695 1498 aa22.1■■□□□ 1.13
SLC8B1-205ENST00000548518 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
SLC8B1-205ENST00000548518 HMGXB3Q12766 1538 aa22.03■■□□□ 1.12
SLC8B1-205ENST00000548518 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
SLC8B1-205ENST00000548518 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
SLC8B1-205ENST00000548518 WIZO95785 1651 aa21.91■■□□□ 1.1
SLC8B1-205ENST00000548518 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
SLC8B1-205ENST00000548518 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
SLC8B1-205ENST00000548518 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
SLC8B1-205ENST00000548518 NESP48681 1621 aa21.5■■□□□ 1.03
SLC8B1-205ENST00000548518 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
SLC8B1-205ENST00000548518 ERCC6Q03468 1493 aa21.48■■□□□ 1.03
SLC8B1-205ENST00000548518 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
SLC8B1-205ENST00000548518 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
SLC8B1-205ENST00000548518 CFTRP13569 1480 aa21.37■■□□□ 1.01
SLC8B1-205ENST00000548518 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
SLC8B1-205ENST00000548518 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
SLC8B1-205ENST00000548518 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
SLC8B1-205ENST00000548518 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
SLC8B1-205ENST00000548518 CUX2O14529 1486 aa21.18■□□□□ 0.98
SLC8B1-205ENST00000548518 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
SLC8B1-205ENST00000548518 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
SLC8B1-205ENST00000548518 WDR62O43379 1518 aa21.06■□□□□ 0.96
SLC8B1-205ENST00000548518 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
SLC8B1-205ENST00000548518 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
SLC8B1-205ENST00000548518 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
SLC8B1-205ENST00000548518 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
SLC8B1-205ENST00000548518 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
SLC8B1-205ENST00000548518 CUX1P39880 1505 aa20.75■□□□□ 0.91
SLC8B1-205ENST00000548518 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
SLC8B1-205ENST00000548518 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
SLC8B1-205ENST00000548518 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
SLC8B1-205ENST00000548518 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
SLC8B1-205ENST00000548518 SOGA1O94964 1423 aa20.68■□□□□ 0.9
SLC8B1-205ENST00000548518 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
SLC8B1-205ENST00000548518 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.9
SLC8B1-205ENST00000548518 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
SLC8B1-205ENST00000548518 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
SLC8B1-205ENST00000548518 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
SLC8B1-205ENST00000548518 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
SLC8B1-205ENST00000548518 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
SLC8B1-205ENST00000548518 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
SLC8B1-205ENST00000548518 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
SLC8B1-205ENST00000548518 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
SLC8B1-205ENST00000548518 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.87
SLC8B1-205ENST00000548518 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
SLC8B1-205ENST00000548518 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
SLC8B1-205ENST00000548518 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
SLC8B1-205ENST00000548518 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
SLC8B1-205ENST00000548518 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
SLC8B1-205ENST00000548518 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
SLC8B1-205ENST00000548518 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
SLC8B1-205ENST00000548518 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
SLC8B1-205ENST00000548518 FBLN2P98095 1184 aa20.34■□□□□ 0.85
SLC8B1-205ENST00000548518 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
SLC8B1-205ENST00000548518 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
SLC8B1-205ENST00000548518 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
SLC8B1-205ENST00000548518 CHD1O14646 1710 aa20.29■□□□□ 0.84
SLC8B1-205ENST00000548518 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
SLC8B1-205ENST00000548518 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
SLC8B1-205ENST00000548518 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
SLC8B1-205ENST00000548518 CUL7Q14999 1698 aa20.16■□□□□ 0.82
SLC8B1-205ENST00000548518 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
SLC8B1-205ENST00000548518 IGF1RP08069 1367 aa20.14■□□□□ 0.81
SLC8B1-205ENST00000548518 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.81
SLC8B1-205ENST00000548518 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
SLC8B1-205ENST00000548518 NUP160Q12769 1436 aa20.03■□□□□ 0.8
SLC8B1-205ENST00000548518 EEA1Q15075 1411 aa20.03■□□□□ 0.8
SLC8B1-205ENST00000548518 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
SLC8B1-205ENST00000548518 CEP170Q5SW79 1584 aa20■□□□□ 0.79
SLC8B1-205ENST00000548518 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
SLC8B1-205ENST00000548518 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
SLC8B1-205ENST00000548518 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
SLC8B1-205ENST00000548518 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
SLC8B1-205ENST00000548518 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms