RNA–Protein interactions for RNA: ENST00000548503.1

TBX3-203, Transcript of T-box 3, humanhuman

TSL 2

Gene TBX3, Length 494 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-203ENST00000548503 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
TBX3-203ENST00000548503 ABCC9O60706 1549 aa22.13■■□□□ 1.13
TBX3-203ENST00000548503 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
TBX3-203ENST00000548503 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
TBX3-203ENST00000548503 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
TBX3-203ENST00000548503 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
TBX3-203ENST00000548503 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
TBX3-203ENST00000548503 NACADO15069 1562 aa20.76■□□□□ 0.91
TBX3-203ENST00000548503 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
TBX3-203ENST00000548503 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
TBX3-203ENST00000548503 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
TBX3-203ENST00000548503 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
TBX3-203ENST00000548503 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
TBX3-203ENST00000548503 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
TBX3-203ENST00000548503 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
TBX3-203ENST00000548503 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
TBX3-203ENST00000548503 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
TBX3-203ENST00000548503 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
TBX3-203ENST00000548503 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
TBX3-203ENST00000548503 CUX2O14529 1486 aa19.39■□□□□ 0.69
TBX3-203ENST00000548503 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
TBX3-203ENST00000548503 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
TBX3-203ENST00000548503 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
TBX3-203ENST00000548503 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
TBX3-203ENST00000548503 MROH2BQ7Z745 1585 aa19.17■□□□□ 0.66
TBX3-203ENST00000548503 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
TBX3-203ENST00000548503 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
TBX3-203ENST00000548503 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
TBX3-203ENST00000548503 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
TBX3-203ENST00000548503 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
TBX3-203ENST00000548503 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
TBX3-203ENST00000548503 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
TBX3-203ENST00000548503 WIZO95785 1651 aa18.95■□□□□ 0.62
TBX3-203ENST00000548503 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
TBX3-203ENST00000548503 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
TBX3-203ENST00000548503 NESP48681 1621 aa18.76■□□□□ 0.59
TBX3-203ENST00000548503 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
TBX3-203ENST00000548503 CCDC88BA6NC98 1476 aa18.62■□□□□ 0.57
TBX3-203ENST00000548503 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
TBX3-203ENST00000548503 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
TBX3-203ENST00000548503 CFTRP13569 1480 aa18.52■□□□□ 0.56
TBX3-203ENST00000548503 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
TBX3-203ENST00000548503 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
TBX3-203ENST00000548503 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
TBX3-203ENST00000548503 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
TBX3-203ENST00000548503 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
TBX3-203ENST00000548503 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
TBX3-203ENST00000548503 WDR62O43379 1518 aa18.32■□□□□ 0.52
TBX3-203ENST00000548503 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
TBX3-203ENST00000548503 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
TBX3-203ENST00000548503 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
TBX3-203ENST00000548503 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
TBX3-203ENST00000548503 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
TBX3-203ENST00000548503 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.49
TBX3-203ENST00000548503 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
TBX3-203ENST00000548503 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.49
TBX3-203ENST00000548503 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
TBX3-203ENST00000548503 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
TBX3-203ENST00000548503 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
TBX3-203ENST00000548503 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
TBX3-203ENST00000548503 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.48
TBX3-203ENST00000548503 CUX1P39880 1505 aa17.98■□□□□ 0.47
TBX3-203ENST00000548503 TOP2BQ02880 1626 aa17.96■□□□□ 0.47
TBX3-203ENST00000548503 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
TBX3-203ENST00000548503 BIVM-ERCC5R4GMW8 1640 aa17.94■□□□□ 0.46
TBX3-203ENST00000548503 POLA1P09884 1462 aaPredicted RBP17.92■□□□□ 0.46
TBX3-203ENST00000548503 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
TBX3-203ENST00000548503 SOGA1O94964 1423 aa17.9■□□□□ 0.46
TBX3-203ENST00000548503 SYNJ1O43426 1573 aa17.88■□□□□ 0.45
TBX3-203ENST00000548503 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
TBX3-203ENST00000548503 ARAP1Q96P48 1450 aa17.83■□□□□ 0.45
TBX3-203ENST00000548503 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
TBX3-203ENST00000548503 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
TBX3-203ENST00000548503 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
TBX3-203ENST00000548503 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
TBX3-203ENST00000548503 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
TBX3-203ENST00000548503 FBLN2P98095 1184 aa17.71■□□□□ 0.43
TBX3-203ENST00000548503 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
TBX3-203ENST00000548503 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
TBX3-203ENST00000548503 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
TBX3-203ENST00000548503 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
TBX3-203ENST00000548503 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
TBX3-203ENST00000548503 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.429e-8■■■■■ 30.5
TBX3-203ENST00000548503 CHD1O14646 1710 aa17.65■□□□□ 0.42
TBX3-203ENST00000548503 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
TBX3-203ENST00000548503 EEA1Q15075 1411 aa17.63■□□□□ 0.41
TBX3-203ENST00000548503 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
TBX3-203ENST00000548503 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
TBX3-203ENST00000548503 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
TBX3-203ENST00000548503 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
TBX3-203ENST00000548503 IGF1RP08069 1367 aa17.53■□□□□ 0.4
TBX3-203ENST00000548503 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
TBX3-203ENST00000548503 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
TBX3-203ENST00000548503 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
TBX3-203ENST00000548503 CUL7Q14999 1698 aa17.51■□□□□ 0.39
TBX3-203ENST00000548503 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
TBX3-203ENST00000548503 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
TBX3-203ENST00000548503 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
TBX3-203ENST00000548503 CARMIL1Q5VZK9 1371 aa17.46■□□□□ 0.39
TBX3-203ENST00000548503 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms