RNA–Protein interactions for RNA: ENST00000548448.1

WDR90-210, Transcript of WD repeat domain 90, humanhuman

TSL 2

Gene WDR90, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-210ENST00000548448 NISCHQ9Y2I1 1504 aa43.63■■■■■ 4.58
WDR90-210ENST00000548448 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
WDR90-210ENST00000548448 ABCC9O60706 1549 aa37.74■■■■□ 3.63
WDR90-210ENST00000548448 RB1CC1Q8TDY2 1594 aa36.43■■■■□ 3.42
WDR90-210ENST00000548448 NACADO15069 1562 aa36.42■■■■□ 3.42
WDR90-210ENST00000548448 ZCCHC6Q5VYS8 1495 aaKnown RBP36.39■■■■□ 3.42
WDR90-210ENST00000548448 DCAF8L2P0C7V8 631 aa36.35■■■■□ 3.41
WDR90-210ENST00000548448 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
WDR90-210ENST00000548448 DCAF1Q9Y4B6 1507 aa36.15■■■■□ 3.38
WDR90-210ENST00000548448 UNC13AQ9UPW8 1703 aa35.57■■■■□ 3.28
WDR90-210ENST00000548448 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
WDR90-210ENST00000548448 BICRAQ9NZM4 1560 aa35.27■■■■□ 3.24
WDR90-210ENST00000548448 PABPN1Q86U42 306 aaKnown RBP eCLIP35.26■■■■□ 3.24
WDR90-210ENST00000548448 SHROOM4Q9ULL8 1493 aa35.01■■■■□ 3.19
WDR90-210ENST00000548448 DNAJC5BQ9UF47 199 aa34.45■■■■□ 3.11
WDR90-210ENST00000548448 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
WDR90-210ENST00000548448 CC2D2AQ9P2K1 1620 aa34.17■■■■□ 3.06
WDR90-210ENST00000548448 CECR2Q9BXF3 1484 aa33.93■■■■□ 3.02
WDR90-210ENST00000548448 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
WDR90-210ENST00000548448 BAZ1AQ9NRL2 1556 aaPredicted RBP33.84■■■■□ 3.01
WDR90-210ENST00000548448 SMARCA2P51531 1590 aa33.62■■■□□ 2.97
WDR90-210ENST00000548448 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
WDR90-210ENST00000548448 ATAD2BQ9ULI0 1458 aa33.6■■■□□ 2.97
WDR90-210ENST00000548448 NCAPD3P42695 1498 aa33.58■■■□□ 2.97
WDR90-210ENST00000548448 PEG3Q9GZU2 1588 aa33.52■■■□□ 2.96
WDR90-210ENST00000548448 HMGXB3Q12766 1538 aa33.46■■■□□ 2.95
WDR90-210ENST00000548448 BAZ1BQ9UIG0 1483 aaKnown RBP33.36■■■□□ 2.93
WDR90-210ENST00000548448 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
WDR90-210ENST00000548448 WIZO95785 1651 aa33.26■■■□□ 2.91
WDR90-210ENST00000548448 TOP2AP11388 1531 aaKnown RBP32.95■■■□□ 2.87
WDR90-210ENST00000548448 LAMC3Q9Y6N6 1575 aa32.7■■■□□ 2.82
WDR90-210ENST00000548448 NESP48681 1621 aa32.69■■■□□ 2.82
WDR90-210ENST00000548448 CADPSQ9ULU8 1353 aa32.6■■■□□ 2.81
WDR90-210ENST00000548448 ERCC6Q03468 1493 aa32.56■■■□□ 2.8
WDR90-210ENST00000548448 CCDC88BA6NC98 1476 aa32.52■■■□□ 2.8
WDR90-210ENST00000548448 SUPT5HO00267 1087 aaKnown RBP32.51■■■□□ 2.79
WDR90-210ENST00000548448 PDS5BQ9NTI5 1447 aa32.48■■■□□ 2.79
WDR90-210ENST00000548448 CFTRP13569 1480 aa32.45■■■□□ 2.79
WDR90-210ENST00000548448 KIF21AQ7Z4S6 1674 aa32.34■■■□□ 2.77
WDR90-210ENST00000548448 PRDM2Q13029 1718 aa32.26■■■□□ 2.75
WDR90-210ENST00000548448 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
WDR90-210ENST00000548448 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
WDR90-210ENST00000548448 CEP164Q9UPV0 1460 aa32.2■■■□□ 2.75
WDR90-210ENST00000548448 CUX2O14529 1486 aa32.19■■■□□ 2.74
WDR90-210ENST00000548448 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
WDR90-210ENST00000548448 WDR62O43379 1518 aa32■■■□□ 2.71
WDR90-210ENST00000548448 URB2Q14146 1524 aaKnown RBP31.88■■■□□ 2.69
WDR90-210ENST00000548448 ABCC8Q09428 1581 aa31.78■■■□□ 2.68
WDR90-210ENST00000548448 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
WDR90-210ENST00000548448 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
WDR90-210ENST00000548448 CUX1P39880 1505 aa31.54■■■□□ 2.64
WDR90-210ENST00000548448 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
WDR90-210ENST00000548448 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
WDR90-210ENST00000548448 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
WDR90-210ENST00000548448 WRNQ14191 1432 aaPredicted RBP eCLIP31.4■■■□□ 2.62
WDR90-210ENST00000548448 TARBP1Q13395 1621 aaKnown RBP31.37■■■□□ 2.61
WDR90-210ENST00000548448 SOGA1O94964 1423 aa31.33■■■□□ 2.61
WDR90-210ENST00000548448 TOP2BQ02880 1626 aa31.32■■■□□ 2.6
WDR90-210ENST00000548448 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
WDR90-210ENST00000548448 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
WDR90-210ENST00000548448 RAD54L2Q9Y4B4 1467 aa31.3■■■□□ 2.6
WDR90-210ENST00000548448 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
WDR90-210ENST00000548448 EIF4G3O43432 1585 aaKnown RBP31.24■■■□□ 2.59
WDR90-210ENST00000548448 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
WDR90-210ENST00000548448 AQRO60306 1485 aaKnown RBP eCLIP31.15■■■□□ 2.58
WDR90-210ENST00000548448 ABCA10Q8WWZ4 1543 aa31.14■■■□□ 2.57
WDR90-210ENST00000548448 TDRD9Q8NDG6 1382 aaKnown RBP31.12■■■□□ 2.57
WDR90-210ENST00000548448 GAPVD1Q14C86 1478 aa31■■■□□ 2.55
WDR90-210ENST00000548448 ABCA5Q8WWZ7 1642 aa30.99■■■□□ 2.55
WDR90-210ENST00000548448 DNAJC5Q9H3Z4 198 aa30.99■■■□□ 2.55
WDR90-210ENST00000548448 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
WDR90-210ENST00000548448 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
WDR90-210ENST00000548448 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
WDR90-210ENST00000548448 MAGI1Q96QZ7 1491 aaPredicted RBP30.9■■■□□ 2.54
WDR90-210ENST00000548448 OSCARQ8IYS5 282 aa30.85■■■□□ 2.53
WDR90-210ENST00000548448 CHD1O14646 1710 aa30.81■■■□□ 2.52
WDR90-210ENST00000548448 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
WDR90-210ENST00000548448 SYNJ2O15056 1496 aa30.76■■■□□ 2.52
WDR90-210ENST00000548448 FBLN2P98095 1184 aa30.76■■■□□ 2.51
WDR90-210ENST00000548448 KIF27Q86VH2 1401 aa30.75■■■□□ 2.51
WDR90-210ENST00000548448 TRIM41Q8WV44 630 aa30.73■■■□□ 2.51
WDR90-210ENST00000548448 CHMP7Q8WUX9 453 aaPredicted RBP30.72■■■□□ 2.51
WDR90-210ENST00000548448 ADAMTS12P58397 1594 aa30.7■■■□□ 2.5
WDR90-210ENST00000548448 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.5
WDR90-210ENST00000548448 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
WDR90-210ENST00000548448 IGF1RP08069 1367 aa30.56■■■□□ 2.48
WDR90-210ENST00000548448 CUL7Q14999 1698 aa30.54■■■□□ 2.48
WDR90-210ENST00000548448 CLASP1Q7Z460 1538 aa30.48■■■□□ 2.47
WDR90-210ENST00000548448 NUP160Q12769 1436 aa30.43■■■□□ 2.46
WDR90-210ENST00000548448 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
WDR90-210ENST00000548448 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
WDR90-210ENST00000548448 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
WDR90-210ENST00000548448 CEP170Q5SW79 1584 aa30.4■■■□□ 2.46
WDR90-210ENST00000548448 ARHGEF11O15085 1522 aa30.35■■■□□ 2.45
WDR90-210ENST00000548448 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
WDR90-210ENST00000548448 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
WDR90-210ENST00000548448 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
WDR90-210ENST00000548448 EEA1Q15075 1411 aa30.28■■■□□ 2.44
WDR90-210ENST00000548448 RAPGEF2Q9Y4G8 1499 aa30.25■■■□□ 2.43
WDR90-210ENST00000548448 SHROOM2Q13796 1616 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms