RNA–Protein interactions for RNA: ENST00000548311.5

TROAP-207, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-207ENST00000548311 NISCHQ9Y2I1 1504 aa37.79■■■■□ 3.64
TROAP-207ENST00000548311 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
TROAP-207ENST00000548311 ABCC9O60706 1549 aa33.58■■■□□ 2.97
TROAP-207ENST00000548311 RB1CC1Q8TDY2 1594 aa32.04■■■□□ 2.72
TROAP-207ENST00000548311 DCAF8L2P0C7V8 631 aa31.91■■■□□ 2.7
TROAP-207ENST00000548311 NACADO15069 1562 aa31.87■■■□□ 2.69
TROAP-207ENST00000548311 MYO15BQ96JP2 1530 aa31.46■■■□□ 2.63
TROAP-207ENST00000548311 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
TROAP-207ENST00000548311 PABPN1Q86U42 306 aaKnown RBP eCLIP31.33■■■□□ 2.61
TROAP-207ENST00000548311 UNC13AQ9UPW8 1703 aa31.3■■■□□ 2.6
TROAP-207ENST00000548311 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
TROAP-207ENST00000548311 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
TROAP-207ENST00000548311 BICRAQ9NZM4 1560 aa31.07■■■□□ 2.56
TROAP-207ENST00000548311 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
TROAP-207ENST00000548311 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
TROAP-207ENST00000548311 CC2D2AQ9P2K1 1620 aa30.32■■■□□ 2.44
TROAP-207ENST00000548311 EIF4G1Q04637 1599 aaKnown RBP30.31■■■□□ 2.44
TROAP-207ENST00000548311 CECR2Q9BXF3 1484 aa30.2■■■□□ 2.43
TROAP-207ENST00000548311 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
TROAP-207ENST00000548311 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
TROAP-207ENST00000548311 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
TROAP-207ENST00000548311 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
TROAP-207ENST00000548311 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
TROAP-207ENST00000548311 HMGXB3Q12766 1538 aa29.23■■■□□ 2.27
TROAP-207ENST00000548311 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
TROAP-207ENST00000548311 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
TROAP-207ENST00000548311 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
TROAP-207ENST00000548311 ERCC6Q03468 1493 aa29.01■■■□□ 2.23
TROAP-207ENST00000548311 NESP48681 1621 aa28.91■■■□□ 2.22
TROAP-207ENST00000548311 WIZO95785 1651 aa28.82■■■□□ 2.2
TROAP-207ENST00000548311 CUX2O14529 1486 aa28.78■■■□□ 2.2
TROAP-207ENST00000548311 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
TROAP-207ENST00000548311 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
TROAP-207ENST00000548311 PDS5BQ9NTI5 1447 aa28.57■■■□□ 2.16
TROAP-207ENST00000548311 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
TROAP-207ENST00000548311 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
TROAP-207ENST00000548311 THOC2Q8NI27 1593 aaKnown RBP28.53■■■□□ 2.16
TROAP-207ENST00000548311 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
TROAP-207ENST00000548311 DNAJC5Q9H3Z4 198 aa28.44■■■□□ 2.14
TROAP-207ENST00000548311 MRC2Q9UBG0 1479 aa28.31■■■□□ 2.12
TROAP-207ENST00000548311 CFTRP13569 1480 aa28.27■■■□□ 2.12
TROAP-207ENST00000548311 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
TROAP-207ENST00000548311 FANCD2Q9BXW9 1451 aa28.26■■■□□ 2.11
TROAP-207ENST00000548311 WDR62O43379 1518 aa28.21■■■□□ 2.11
TROAP-207ENST00000548311 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
TROAP-207ENST00000548311 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
TROAP-207ENST00000548311 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
TROAP-207ENST00000548311 TOPBP1Q92547 1522 aa27.74■■■□□ 2.03
TROAP-207ENST00000548311 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
TROAP-207ENST00000548311 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
TROAP-207ENST00000548311 IFT140Q96RY7 1462 aa27.67■■■□□ 2.02
TROAP-207ENST00000548311 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
TROAP-207ENST00000548311 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
TROAP-207ENST00000548311 OSCARQ8IYS5 282 aa27.54■■■□□ 2
TROAP-207ENST00000548311 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
TROAP-207ENST00000548311 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
TROAP-207ENST00000548311 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
TROAP-207ENST00000548311 TRIM41Q8WV44 630 aa27.43■■□□□ 1.98
TROAP-207ENST00000548311 AQRO60306 1485 aaKnown RBP eCLIP27.41■■□□□ 1.984e-8■■■■□ 24.6
TROAP-207ENST00000548311 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
TROAP-207ENST00000548311 SOGA1O94964 1423 aa27.37■■□□□ 1.97
TROAP-207ENST00000548311 CUX1P39880 1505 aa27.36■■□□□ 1.97
TROAP-207ENST00000548311 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
TROAP-207ENST00000548311 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
TROAP-207ENST00000548311 FBLN2P98095 1184 aa27.24■■□□□ 1.95
TROAP-207ENST00000548311 CHD1O14646 1710 aa27.22■■□□□ 1.95
TROAP-207ENST00000548311 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
TROAP-207ENST00000548311 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
TROAP-207ENST00000548311 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
TROAP-207ENST00000548311 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
TROAP-207ENST00000548311 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
TROAP-207ENST00000548311 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
TROAP-207ENST00000548311 ARHGEF11O15085 1522 aa27.1■■□□□ 1.93
TROAP-207ENST00000548311 MAGI1Q96QZ7 1491 aaPredicted RBP27.06■■□□□ 1.92
TROAP-207ENST00000548311 CHMP7Q8WUX9 453 aaPredicted RBP27.05■■□□□ 1.92
TROAP-207ENST00000548311 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
TROAP-207ENST00000548311 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
TROAP-207ENST00000548311 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
TROAP-207ENST00000548311 PBRM1Q86U86 1689 aa27.01■■□□□ 1.92
TROAP-207ENST00000548311 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
TROAP-207ENST00000548311 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
TROAP-207ENST00000548311 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
TROAP-207ENST00000548311 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
TROAP-207ENST00000548311 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
TROAP-207ENST00000548311 CYB5RLQ6IPT4 315 aa26.92■■□□□ 1.9
TROAP-207ENST00000548311 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
TROAP-207ENST00000548311 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
TROAP-207ENST00000548311 ADAMTS12P58397 1594 aa26.76■■□□□ 1.87
TROAP-207ENST00000548311 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
TROAP-207ENST00000548311 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
TROAP-207ENST00000548311 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
TROAP-207ENST00000548311 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
TROAP-207ENST00000548311 NUP160Q12769 1436 aa26.62■■□□□ 1.85
TROAP-207ENST00000548311 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
TROAP-207ENST00000548311 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
TROAP-207ENST00000548311 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
TROAP-207ENST00000548311 SHROOM2Q13796 1616 aa26.46■■□□□ 1.83
TROAP-207ENST00000548311 IGF1RP08069 1367 aa26.43■■□□□ 1.82
TROAP-207ENST00000548311 PRG4Q92954 1404 aaPredicted RBP26.39■■□□□ 1.81
TROAP-207ENST00000548311 CUL7Q14999 1698 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms