RNA–Protein interactions for RNA: ENST00000548196.1

C12orf42-206, Transcript of chromosome 12 open reading frame 42, humanhuman

TSL 4

Gene C12orf42, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-206ENST00000548196 NISCHQ9Y2I1 1504 aa50.41■■■■■ 5.66
C12orf42-206ENST00000548196 CCDC180Q9P1Z9 1646 aa44.87■■■■■ 4.77
C12orf42-206ENST00000548196 ABCC9O60706 1549 aa43.63■■■■■ 4.57
C12orf42-206ENST00000548196 RB1CC1Q8TDY2 1594 aa42.11■■■■■ 4.33
C12orf42-206ENST00000548196 NACADO15069 1562 aa42.1■■■■■ 4.33
C12orf42-206ENST00000548196 ZCCHC6Q5VYS8 1495 aaKnown RBP42.03■■■■■ 4.32
C12orf42-206ENST00000548196 MYO15BQ96JP2 1530 aa41.93■■■■■ 4.3
C12orf42-206ENST00000548196 DCAF8L2P0C7V8 631 aa41.84■■■■■ 4.29
C12orf42-206ENST00000548196 DCAF1Q9Y4B6 1507 aa41.78■■■■■ 4.28
C12orf42-206ENST00000548196 UNC13AQ9UPW8 1703 aa41.25■■■■■ 4.19
C12orf42-206ENST00000548196 BICRAQ9NZM4 1560 aa40.86■■■■■ 4.13
C12orf42-206ENST00000548196 SCRIBQ14160 1630 aa40.83■■■■■ 4.13
C12orf42-206ENST00000548196 PABPN1Q86U42 306 aaKnown RBP eCLIP40.71■■■■■ 4.11
C12orf42-206ENST00000548196 SHROOM4Q9ULL8 1493 aa40.47■■■■■ 4.07
C12orf42-206ENST00000548196 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
C12orf42-206ENST00000548196 EIF4G1Q04637 1599 aaKnown RBP39.74■■■■□ 3.95
C12orf42-206ENST00000548196 CC2D2AQ9P2K1 1620 aa39.55■■■■□ 3.92
C12orf42-206ENST00000548196 CECR2Q9BXF3 1484 aa39.22■■■■□ 3.87
C12orf42-206ENST00000548196 SMARCA4P51532 1647 aa39.12■■■■□ 3.85
C12orf42-206ENST00000548196 BAZ1AQ9NRL2 1556 aaPredicted RBP39.08■■■■□ 3.85
C12orf42-206ENST00000548196 ATAD2BQ9ULI0 1458 aa38.84■■■■□ 3.81
C12orf42-206ENST00000548196 SMARCA2P51531 1590 aa38.82■■■■□ 3.81
C12orf42-206ENST00000548196 MROH2BQ7Z745 1585 aa38.82■■■■□ 3.81
C12orf42-206ENST00000548196 NCAPD3P42695 1498 aa38.81■■■■□ 3.8
C12orf42-206ENST00000548196 PEG3Q9GZU2 1588 aa38.78■■■■□ 3.8
C12orf42-206ENST00000548196 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
C12orf42-206ENST00000548196 BAZ1BQ9UIG0 1483 aaKnown RBP38.51■■■■□ 3.76
C12orf42-206ENST00000548196 WIZO95785 1651 aa38.44■■■■□ 3.74
C12orf42-206ENST00000548196 RSF1Q96T23 1441 aaPredicted RBP38.4■■■■□ 3.74
C12orf42-206ENST00000548196 TOP2AP11388 1531 aaKnown RBP38.04■■■■□ 3.68
C12orf42-206ENST00000548196 LAMC3Q9Y6N6 1575 aa37.81■■■■□ 3.64
C12orf42-206ENST00000548196 NESP48681 1621 aa37.8■■■■□ 3.64
C12orf42-206ENST00000548196 CADPSQ9ULU8 1353 aa37.65■■■■□ 3.62
C12orf42-206ENST00000548196 ERCC6Q03468 1493 aa37.59■■■■□ 3.61
C12orf42-206ENST00000548196 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
C12orf42-206ENST00000548196 CFTRP13569 1480 aa37.48■■■■□ 3.59
C12orf42-206ENST00000548196 PDS5BQ9NTI5 1447 aa37.48■■■■□ 3.59
C12orf42-206ENST00000548196 KIF21AQ7Z4S6 1674 aa37.46■■■■□ 3.59
C12orf42-206ENST00000548196 SUPT5HO00267 1087 aaKnown RBP37.35■■■■□ 3.57
C12orf42-206ENST00000548196 PRDM2Q13029 1718 aa37.35■■■■□ 3.57
C12orf42-206ENST00000548196 THOC2Q8NI27 1593 aaKnown RBP37.31■■■■□ 3.56
C12orf42-206ENST00000548196 CUX2O14529 1486 aa37.24■■■■□ 3.55
C12orf42-206ENST00000548196 FANCD2Q9BXW9 1451 aa37.22■■■■□ 3.55
C12orf42-206ENST00000548196 CEP164Q9UPV0 1460 aa37.18■■■■□ 3.54
C12orf42-206ENST00000548196 MRC2Q9UBG0 1479 aa37.11■■■■□ 3.53
C12orf42-206ENST00000548196 WDR62O43379 1518 aa37.03■■■■□ 3.52
C12orf42-206ENST00000548196 URB2Q14146 1524 aaKnown RBP36.87■■■■□ 3.49
C12orf42-206ENST00000548196 ABCC8Q09428 1581 aa36.69■■■■□ 3.46
C12orf42-206ENST00000548196 TOPBP1Q92547 1522 aa36.66■■■■□ 3.46
C12orf42-206ENST00000548196 DNMBPQ6XZF7 1577 aa36.66■■■■□ 3.46
C12orf42-206ENST00000548196 CUX1P39880 1505 aa36.43■■■■□ 3.42
C12orf42-206ENST00000548196 IFT140Q96RY7 1462 aa36.4■■■■□ 3.42
C12orf42-206ENST00000548196 POLA1P09884 1462 aaPredicted RBP36.35■■■■□ 3.41
C12orf42-206ENST00000548196 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
C12orf42-206ENST00000548196 FGD5Q6ZNL6 1462 aa36.27■■■■□ 3.4
C12orf42-206ENST00000548196 BIVM-ERCC5R4GMW8 1640 aa36.21■■■■□ 3.39
C12orf42-206ENST00000548196 ZNF608Q9ULD9 1512 aaPredicted RBP36.2■■■■□ 3.39
C12orf42-206ENST00000548196 WRNQ14191 1432 aaPredicted RBP eCLIP36.19■■■■□ 3.38
C12orf42-206ENST00000548196 TOP2BQ02880 1626 aa36.18■■■■□ 3.38
C12orf42-206ENST00000548196 SOGA1O94964 1423 aa36.16■■■■□ 3.38
C12orf42-206ENST00000548196 SYNJ1O43426 1573 aa36.15■■■■□ 3.38
C12orf42-206ENST00000548196 RAD54L2Q9Y4B4 1467 aa36.15■■■■□ 3.38
C12orf42-206ENST00000548196 EIF4G3O43432 1585 aaKnown RBP36.14■■■■□ 3.38
C12orf42-206ENST00000548196 WDR97A6NE52 1622 aa36.08■■■■□ 3.37
C12orf42-206ENST00000548196 AQRO60306 1485 aaKnown RBP eCLIP35.99■■■■□ 3.35
C12orf42-206ENST00000548196 ABCA10Q8WWZ4 1543 aa35.95■■■■□ 3.35
C12orf42-206ENST00000548196 TDRD9Q8NDG6 1382 aaKnown RBP35.91■■■■□ 3.34
C12orf42-206ENST00000548196 DNAJC5Q9H3Z4 198 aa35.9■■■■□ 3.34
C12orf42-206ENST00000548196 ABCA5Q8WWZ7 1642 aa35.85■■■■□ 3.33
C12orf42-206ENST00000548196 PBRM1Q86U86 1689 aa35.78■■■■□ 3.32
C12orf42-206ENST00000548196 GAPVD1Q14C86 1478 aa35.77■■■■□ 3.32
C12orf42-206ENST00000548196 GRIN2BQ13224 1484 aa35.76■■■■□ 3.32
C12orf42-206ENST00000548196 SNAPC4Q5SXM2 1469 aa35.69■■■■□ 3.3
C12orf42-206ENST00000548196 CHD1O14646 1710 aa35.69■■■■□ 3.3
C12orf42-206ENST00000548196 MAGI1Q96QZ7 1491 aaPredicted RBP35.68■■■■□ 3.3
C12orf42-206ENST00000548196 OSCARQ8IYS5 282 aa35.61■■■■□ 3.29
C12orf42-206ENST00000548196 ERICH3Q5RHP9 1530 aa35.54■■■■□ 3.28
C12orf42-206ENST00000548196 SYNJ2O15056 1496 aa35.53■■■■□ 3.28
C12orf42-206ENST00000548196 ADAMTS12P58397 1594 aa35.47■■■■□ 3.27
C12orf42-206ENST00000548196 FBLN2P98095 1184 aa35.44■■■■□ 3.26
C12orf42-206ENST00000548196 KIF27Q86VH2 1401 aa35.42■■■■□ 3.26
C12orf42-206ENST00000548196 CHMP7Q8WUX9 453 aaPredicted RBP35.41■■■■□ 3.26
C12orf42-206ENST00000548196 FHAD1B1AJZ9 1412 aa35.37■■■■□ 3.25
C12orf42-206ENST00000548196 GRIN2AQ12879 1464 aa35.31■■■■□ 3.24
C12orf42-206ENST00000548196 TRIM41Q8WV44 630 aa35.31■■■■□ 3.24
C12orf42-206ENST00000548196 CLASP1Q7Z460 1538 aa35.29■■■■□ 3.24
C12orf42-206ENST00000548196 CUL7Q14999 1698 aa35.27■■■■□ 3.24
C12orf42-206ENST00000548196 IGF1RP08069 1367 aa35.26■■■■□ 3.24
C12orf42-206ENST00000548196 NUP160Q12769 1436 aa35.16■■■■□ 3.22
C12orf42-206ENST00000548196 CEP170Q5SW79 1584 aa35.16■■■■□ 3.22
C12orf42-206ENST00000548196 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
C12orf42-206ENST00000548196 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
C12orf42-206ENST00000548196 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
C12orf42-206ENST00000548196 ARHGEF11O15085 1522 aa35.12■■■■□ 3.21
C12orf42-206ENST00000548196 RUSC2Q8N2Y8 1516 aa35.12■■■■□ 3.21
C12orf42-206ENST00000548196 CARMIL1Q5VZK9 1371 aa35.04■■■■□ 3.2
C12orf42-206ENST00000548196 CHIC1Q5VXU3 224 aa34.97■■■■□ 3.19
C12orf42-206ENST00000548196 SHROOM2Q13796 1616 aa34.95■■■■□ 3.19
C12orf42-206ENST00000548196 RAPGEF2Q9Y4G8 1499 aa34.88■■■■□ 3.17
C12orf42-206ENST00000548196 EEA1Q15075 1411 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms