RNA–Protein interactions for RNA: ENST00000548186.5

SLC8B1-203, Transcript of solute carrier family 8 member B1, humanhuman

TSL 3

Gene SLC8B1, Length 996 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-203ENST00000548186 NISCHQ9Y2I1 1504 aa46.65■■■■■ 5.06
SLC8B1-203ENST00000548186 CCDC180Q9P1Z9 1646 aa41.41■■■■■ 4.22
SLC8B1-203ENST00000548186 ABCC9O60706 1549 aa40.62■■■■■ 4.09
SLC8B1-203ENST00000548186 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
SLC8B1-203ENST00000548186 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
SLC8B1-203ENST00000548186 NACADO15069 1562 aa38.94■■■■□ 3.82
SLC8B1-203ENST00000548186 ZCCHC6Q5VYS8 1495 aaKnown RBP38.85■■■■□ 3.81
SLC8B1-203ENST00000548186 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
SLC8B1-203ENST00000548186 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
SLC8B1-203ENST00000548186 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
SLC8B1-203ENST00000548186 PABPN1Q86U42 306 aaKnown RBP eCLIP38■■■■□ 3.67
SLC8B1-203ENST00000548186 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
SLC8B1-203ENST00000548186 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
SLC8B1-203ENST00000548186 SHROOM4Q9ULL8 1493 aa37.33■■■■□ 3.57
SLC8B1-203ENST00000548186 DNAJC5BQ9UF47 199 aa37.32■■■■□ 3.56
SLC8B1-203ENST00000548186 EIF4G1Q04637 1599 aaKnown RBP36.84■■■■□ 3.49
SLC8B1-203ENST00000548186 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
SLC8B1-203ENST00000548186 CECR2Q9BXF3 1484 aa36.45■■■■□ 3.43
SLC8B1-203ENST00000548186 SMARCA4P51532 1647 aa36.19■■■■□ 3.38
SLC8B1-203ENST00000548186 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
SLC8B1-203ENST00000548186 ATAD2BQ9ULI0 1458 aa36■■■■□ 3.35
SLC8B1-203ENST00000548186 MROH2BQ7Z745 1585 aa35.99■■■■□ 3.35
SLC8B1-203ENST00000548186 NCAPD3P42695 1498 aa35.96■■■■□ 3.35
SLC8B1-203ENST00000548186 SMARCA2P51531 1590 aa35.92■■■■□ 3.34
SLC8B1-203ENST00000548186 PEG3Q9GZU2 1588 aa35.8■■■■□ 3.32
SLC8B1-203ENST00000548186 HMGXB3Q12766 1538 aa35.75■■■■□ 3.31
SLC8B1-203ENST00000548186 BAZ1BQ9UIG0 1483 aaKnown RBP35.7■■■■□ 3.31
SLC8B1-203ENST00000548186 WIZO95785 1651 aa35.61■■■■□ 3.29
SLC8B1-203ENST00000548186 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.29
SLC8B1-203ENST00000548186 TOP2AP11388 1531 aaKnown RBP35.18■■■■□ 3.22
SLC8B1-203ENST00000548186 NESP48681 1621 aa35.16■■■■□ 3.22
SLC8B1-203ENST00000548186 LAMC3Q9Y6N6 1575 aa34.99■■■■□ 3.19
SLC8B1-203ENST00000548186 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
SLC8B1-203ENST00000548186 CADPSQ9ULU8 1353 aa34.93■■■■□ 3.18
SLC8B1-203ENST00000548186 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
SLC8B1-203ENST00000548186 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
SLC8B1-203ENST00000548186 PDS5BQ9NTI5 1447 aa34.77■■■■□ 3.16
SLC8B1-203ENST00000548186 CFTRP13569 1480 aa34.71■■■■□ 3.15
SLC8B1-203ENST00000548186 KIF21AQ7Z4S6 1674 aa34.71■■■■□ 3.15
SLC8B1-203ENST00000548186 THOC2Q8NI27 1593 aaKnown RBP34.56■■■■□ 3.12
SLC8B1-203ENST00000548186 CUX2O14529 1486 aa34.54■■■■□ 3.12
SLC8B1-203ENST00000548186 FANCD2Q9BXW9 1451 aa34.53■■■■□ 3.12
SLC8B1-203ENST00000548186 CEP164Q9UPV0 1460 aa34.47■■■■□ 3.11
SLC8B1-203ENST00000548186 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
SLC8B1-203ENST00000548186 MRC2Q9UBG0 1479 aa34.42■■■■□ 3.1
SLC8B1-203ENST00000548186 WDR62O43379 1518 aa34.29■■■■□ 3.08
SLC8B1-203ENST00000548186 URB2Q14146 1524 aaKnown RBP34.2■■■■□ 3.07
SLC8B1-203ENST00000548186 TOPBP1Q92547 1522 aa33.99■■■■□ 3.03
SLC8B1-203ENST00000548186 ABCC8Q09428 1581 aa33.94■■■■□ 3.02
SLC8B1-203ENST00000548186 DNMBPQ6XZF7 1577 aa33.92■■■■□ 3.02
SLC8B1-203ENST00000548186 IFT140Q96RY7 1462 aa33.75■■■□□ 2.99
SLC8B1-203ENST00000548186 CUX1P39880 1505 aa33.74■■■□□ 2.99
SLC8B1-203ENST00000548186 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
SLC8B1-203ENST00000548186 ZNF608Q9ULD9 1512 aaPredicted RBP33.64■■■□□ 2.98
SLC8B1-203ENST00000548186 FGD5Q6ZNL6 1462 aa33.63■■■□□ 2.97
SLC8B1-203ENST00000548186 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
SLC8B1-203ENST00000548186 RAD54L2Q9Y4B4 1467 aa33.6■■■□□ 2.97
SLC8B1-203ENST00000548186 SOGA1O94964 1423 aa33.58■■■□□ 2.97
SLC8B1-203ENST00000548186 DNAJC5Q9H3Z4 198 aa33.54■■■□□ 2.96
SLC8B1-203ENST00000548186 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
SLC8B1-203ENST00000548186 AQRO60306 1485 aaKnown RBP eCLIP33.47■■■□□ 2.952e-6■■■■■ 35.8
SLC8B1-203ENST00000548186 EIF4G3O43432 1585 aaKnown RBP33.47■■■□□ 2.95
SLC8B1-203ENST00000548186 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
SLC8B1-203ENST00000548186 TOP2BQ02880 1626 aa33.43■■■□□ 2.94
SLC8B1-203ENST00000548186 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
SLC8B1-203ENST00000548186 TDRD9Q8NDG6 1382 aaKnown RBP33.42■■■□□ 2.94
SLC8B1-203ENST00000548186 WDR97A6NE52 1622 aa33.31■■■□□ 2.92
SLC8B1-203ENST00000548186 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
SLC8B1-203ENST00000548186 OSCARQ8IYS5 282 aa33.19■■■□□ 2.9
SLC8B1-203ENST00000548186 GAPVD1Q14C86 1478 aa33.18■■■□□ 2.9
SLC8B1-203ENST00000548186 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
SLC8B1-203ENST00000548186 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
SLC8B1-203ENST00000548186 SNAPC4Q5SXM2 1469 aa33.12■■■□□ 2.89
SLC8B1-203ENST00000548186 FBLN2P98095 1184 aa33.1■■■□□ 2.89
SLC8B1-203ENST00000548186 PBRM1Q86U86 1689 aa33.09■■■□□ 2.89
SLC8B1-203ENST00000548186 CHD1O14646 1710 aa33.07■■■□□ 2.88
SLC8B1-203ENST00000548186 MAGI1Q96QZ7 1491 aaPredicted RBP33.04■■■□□ 2.88
SLC8B1-203ENST00000548186 CHMP7Q8WUX9 453 aaPredicted RBP32.97■■■□□ 2.87
SLC8B1-203ENST00000548186 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
SLC8B1-203ENST00000548186 ERICH3Q5RHP9 1530 aa32.86■■■□□ 2.85
SLC8B1-203ENST00000548186 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
SLC8B1-203ENST00000548186 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
SLC8B1-203ENST00000548186 TRIM41Q8WV44 630 aa32.8■■■□□ 2.84
SLC8B1-203ENST00000548186 FHAD1B1AJZ9 1412 aa32.78■■■□□ 2.84
SLC8B1-203ENST00000548186 GRIN2AQ12879 1464 aa32.73■■■□□ 2.83
SLC8B1-203ENST00000548186 IGF1RP08069 1367 aa32.71■■■□□ 2.83
SLC8B1-203ENST00000548186 CLASP1Q7Z460 1538 aa32.68■■■□□ 2.82
SLC8B1-203ENST00000548186 RIMBP3CA6NJZ7 1639 aa32.64■■■□□ 2.82
SLC8B1-203ENST00000548186 RIMBP3BA6NNM3 1639 aa32.64■■■□□ 2.82
SLC8B1-203ENST00000548186 RIMBP3Q9UFD9 1639 aa32.64■■■□□ 2.82
SLC8B1-203ENST00000548186 ARHGEF11O15085 1522 aa32.62■■■□□ 2.81
SLC8B1-203ENST00000548186 RUSC2Q8N2Y8 1516 aa32.61■■■□□ 2.81
SLC8B1-203ENST00000548186 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
SLC8B1-203ENST00000548186 NUP160Q12769 1436 aa32.58■■■□□ 2.81
SLC8B1-203ENST00000548186 CUL7Q14999 1698 aa32.56■■■□□ 2.8
SLC8B1-203ENST00000548186 CARMIL1Q5VZK9 1371 aa32.52■■■□□ 2.8
SLC8B1-203ENST00000548186 CHIC1Q5VXU3 224 aa32.44■■■□□ 2.78
SLC8B1-203ENST00000548186 CYB5RLQ6IPT4 315 aa32.39■■■□□ 2.78
SLC8B1-203ENST00000548186 ARAP1Q96P48 1450 aa32.37■■■□□ 2.77
SLC8B1-203ENST00000548186 SHROOM2Q13796 1616 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms