RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 NISCHQ9Y2I1 1504 aa38.25■■■■□ 3.71
HECTD4-206ENST00000548140 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
HECTD4-206ENST00000548140 ABCC9O60706 1549 aa32.42■■■□□ 2.78
HECTD4-206ENST00000548140 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
HECTD4-206ENST00000548140 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
HECTD4-206ENST00000548140 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
HECTD4-206ENST00000548140 NACADO15069 1562 aa31.52■■■□□ 2.64
HECTD4-206ENST00000548140 MYO15BQ96JP2 1530 aa31.51■■■□□ 2.63
HECTD4-206ENST00000548140 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
HECTD4-206ENST00000548140 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
HECTD4-206ENST00000548140 SHROOM4Q9ULL8 1493 aa30.74■■■□□ 2.51
HECTD4-206ENST00000548140 UNC13AQ9UPW8 1703 aa30.69■■■□□ 2.5
HECTD4-206ENST00000548140 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
HECTD4-206ENST00000548140 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
HECTD4-206ENST00000548140 CECR2Q9BXF3 1484 aa29.76■■■□□ 2.35
HECTD4-206ENST00000548140 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
HECTD4-206ENST00000548140 EIF4G1Q04637 1599 aaKnown RBP29.59■■■□□ 2.33
HECTD4-206ENST00000548140 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
HECTD4-206ENST00000548140 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
HECTD4-206ENST00000548140 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
HECTD4-206ENST00000548140 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
HECTD4-206ENST00000548140 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
HECTD4-206ENST00000548140 WIZO95785 1651 aa29.23■■■□□ 2.27
HECTD4-206ENST00000548140 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
HECTD4-206ENST00000548140 SMARCA2P51531 1590 aa29.2■■■□□ 2.27
HECTD4-206ENST00000548140 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
HECTD4-206ENST00000548140 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
HECTD4-206ENST00000548140 NCAPD3P42695 1498 aa29.09■■■□□ 2.25
HECTD4-206ENST00000548140 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
HECTD4-206ENST00000548140 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
HECTD4-206ENST00000548140 TOP2AP11388 1531 aaKnown RBP28.93■■■□□ 2.22
HECTD4-206ENST00000548140 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
HECTD4-206ENST00000548140 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
HECTD4-206ENST00000548140 CFTRP13569 1480 aa28.26■■■□□ 2.11
HECTD4-206ENST00000548140 NESP48681 1621 aa28.24■■■□□ 2.11
HECTD4-206ENST00000548140 LAMC3Q9Y6N6 1575 aa28.21■■■□□ 2.11
HECTD4-206ENST00000548140 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
HECTD4-206ENST00000548140 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
HECTD4-206ENST00000548140 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
HECTD4-206ENST00000548140 KIF21AQ7Z4S6 1674 aa27.89■■■□□ 2.06
HECTD4-206ENST00000548140 ERCC6Q03468 1493 aa27.89■■■□□ 2.06
HECTD4-206ENST00000548140 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
HECTD4-206ENST00000548140 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
HECTD4-206ENST00000548140 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
HECTD4-206ENST00000548140 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.03
HECTD4-206ENST00000548140 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
HECTD4-206ENST00000548140 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
HECTD4-206ENST00000548140 CUX1P39880 1505 aa27.64■■■□□ 2.02
HECTD4-206ENST00000548140 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
HECTD4-206ENST00000548140 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
HECTD4-206ENST00000548140 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
HECTD4-206ENST00000548140 TOPBP1Q92547 1522 aa27.6■■■□□ 2.01
HECTD4-206ENST00000548140 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
HECTD4-206ENST00000548140 TOP2BQ02880 1626 aa27.56■■■□□ 2
HECTD4-206ENST00000548140 WDR62O43379 1518 aa27.56■■■□□ 2
HECTD4-206ENST00000548140 BIVM-ERCC5R4GMW8 1640 aa27.54■■■□□ 2
HECTD4-206ENST00000548140 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
HECTD4-206ENST00000548140 POLA1P09884 1462 aaPredicted RBP27.42■■□□□ 1.98
HECTD4-206ENST00000548140 SOGA1O94964 1423 aa27.35■■□□□ 1.97
HECTD4-206ENST00000548140 CUX2O14529 1486 aa27.32■■□□□ 1.96
HECTD4-206ENST00000548140 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
HECTD4-206ENST00000548140 IFT140Q96RY7 1462 aa27.26■■□□□ 1.95
HECTD4-206ENST00000548140 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
HECTD4-206ENST00000548140 ABCA10Q8WWZ4 1543 aa27.2■■□□□ 1.94
HECTD4-206ENST00000548140 WDR97A6NE52 1622 aa27.14■■□□□ 1.94
HECTD4-206ENST00000548140 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
HECTD4-206ENST00000548140 ZNF608Q9ULD9 1512 aaPredicted RBP27.1■■□□□ 1.93
HECTD4-206ENST00000548140 KIF27Q86VH2 1401 aa27.09■■□□□ 1.93
HECTD4-206ENST00000548140 RUSC2Q8N2Y8 1516 aa27.08■■□□□ 1.93
HECTD4-206ENST00000548140 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
HECTD4-206ENST00000548140 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
HECTD4-206ENST00000548140 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
HECTD4-206ENST00000548140 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.92
HECTD4-206ENST00000548140 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
HECTD4-206ENST00000548140 EEA1Q15075 1411 aa26.99■■□□□ 1.91
HECTD4-206ENST00000548140 GRIN2BQ13224 1484 aa26.92■■□□□ 1.9
HECTD4-206ENST00000548140 CSRNP3Q8WYN3 585 aa26.92■■□□□ 1.9
HECTD4-206ENST00000548140 IGF1RP08069 1367 aa26.91■■□□□ 1.9
HECTD4-206ENST00000548140 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
HECTD4-206ENST00000548140 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
HECTD4-206ENST00000548140 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
HECTD4-206ENST00000548140 CARMIL1Q5VZK9 1371 aa26.78■■□□□ 1.88
HECTD4-206ENST00000548140 DNAJC5Q9H3Z4 198 aa26.77■■□□□ 1.88
HECTD4-206ENST00000548140 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
HECTD4-206ENST00000548140 CUL7Q14999 1698 aa26.76■■□□□ 1.87
HECTD4-206ENST00000548140 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
HECTD4-206ENST00000548140 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
HECTD4-206ENST00000548140 ADAMTS12P58397 1594 aa26.72■■□□□ 1.87
HECTD4-206ENST00000548140 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
HECTD4-206ENST00000548140 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
HECTD4-206ENST00000548140 FBLN2P98095 1184 aa26.67■■□□□ 1.86
HECTD4-206ENST00000548140 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
HECTD4-206ENST00000548140 SYNJ2O15056 1496 aa26.66■■□□□ 1.86
HECTD4-206ENST00000548140 KIF21BO75037 1637 aa26.65■■□□□ 1.86
HECTD4-206ENST00000548140 GOLGA3Q08378 1498 aa26.59■■□□□ 1.85
HECTD4-206ENST00000548140 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.85
HECTD4-206ENST00000548140 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
HECTD4-206ENST00000548140 CHD1O14646 1710 aa26.53■■□□□ 1.84
HECTD4-206ENST00000548140 UBTFP17480 764 aaKnown RBP26.53■■□□□ 1.84
HECTD4-206ENST00000548140 NUP160Q12769 1436 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms