RNA–Protein interactions for RNA: ENST00000548077.1

SART3-209, Transcript of squamous cell carcinoma antigen recognized by T cells 3, humanhuman

TSL 2

Gene SART3, Length 625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SART3-209ENST00000548077 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
SART3-209ENST00000548077 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
SART3-209ENST00000548077 ABCC9O60706 1549 aa19.35■□□□□ 0.69
SART3-209ENST00000548077 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
SART3-209ENST00000548077 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
SART3-209ENST00000548077 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
SART3-209ENST00000548077 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
SART3-209ENST00000548077 DNAJC5Q9H3Z4 198 aa18■□□□□ 0.47
SART3-209ENST00000548077 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
SART3-209ENST00000548077 NACADO15069 1562 aa17.67■□□□□ 0.42
SART3-209ENST00000548077 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
SART3-209ENST00000548077 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
SART3-209ENST00000548077 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
SART3-209ENST00000548077 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
SART3-209ENST00000548077 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
SART3-209ENST00000548077 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
SART3-209ENST00000548077 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
SART3-209ENST00000548077 MYO15BQ96JP2 1530 aa17.17■□□□□ 0.34
SART3-209ENST00000548077 CUX2O14529 1486 aa17.05■□□□□ 0.32
SART3-209ENST00000548077 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
SART3-209ENST00000548077 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
SART3-209ENST00000548077 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
SART3-209ENST00000548077 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
SART3-209ENST00000548077 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
SART3-209ENST00000548077 DCAF1Q9Y4B6 1507 aa16.62■□□□□ 0.25
SART3-209ENST00000548077 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
SART3-209ENST00000548077 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
SART3-209ENST00000548077 NESP48681 1621 aa16.37■□□□□ 0.21
SART3-209ENST00000548077 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
SART3-209ENST00000548077 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
SART3-209ENST00000548077 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
SART3-209ENST00000548077 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
SART3-209ENST00000548077 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
SART3-209ENST00000548077 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
SART3-209ENST00000548077 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.17
SART3-209ENST00000548077 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
SART3-209ENST00000548077 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
SART3-209ENST00000548077 WDR62O43379 1518 aa15.99■□□□□ 0.15
SART3-209ENST00000548077 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
SART3-209ENST00000548077 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
SART3-209ENST00000548077 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
SART3-209ENST00000548077 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
SART3-209ENST00000548077 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
SART3-209ENST00000548077 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
SART3-209ENST00000548077 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
SART3-209ENST00000548077 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
SART3-209ENST00000548077 CADPSQ9ULU8 1353 aa15.8■□□□□ 0.12
SART3-209ENST00000548077 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
SART3-209ENST00000548077 CYB5RLQ6IPT4 315 aa15.74■□□□□ 0.11
SART3-209ENST00000548077 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
SART3-209ENST00000548077 FOXD1Q16676 465 aa15.71■□□□□ 0.11
SART3-209ENST00000548077 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
SART3-209ENST00000548077 FANCD2Q9BXW9 1451 aa15.63■□□□□ 0.09
SART3-209ENST00000548077 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
SART3-209ENST00000548077 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
SART3-209ENST00000548077 ILDR1Q86SU0 546 aaPredicted RBP15.54■□□□□ 0.08
SART3-209ENST00000548077 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
SART3-209ENST00000548077 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
SART3-209ENST00000548077 CFTRP13569 1480 aa15.46■□□□□ 0.06
SART3-209ENST00000548077 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
SART3-209ENST00000548077 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
SART3-209ENST00000548077 CHD1O14646 1710 aa15.37■□□□□ 0.05
SART3-209ENST00000548077 WIZO95785 1651 aa15.27■□□□□ 0.03
SART3-209ENST00000548077 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
SART3-209ENST00000548077 FBLN2P98095 1184 aa15.25■□□□□ 0.03
SART3-209ENST00000548077 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.037e-7■■■□□ 18.2
SART3-209ENST00000548077 TOPBP1Q92547 1522 aa15.23■□□□□ 0.03
SART3-209ENST00000548077 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
SART3-209ENST00000548077 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
SART3-209ENST00000548077 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
SART3-209ENST00000548077 KDM4FA0A1W2PPD8 638 aa15.12■□□□□ 0.01
SART3-209ENST00000548077 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
SART3-209ENST00000548077 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
SART3-209ENST00000548077 DNMBPQ6XZF7 1577 aa15.1■□□□□ 0.01
SART3-209ENST00000548077 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
SART3-209ENST00000548077 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
SART3-209ENST00000548077 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
SART3-209ENST00000548077 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
SART3-209ENST00000548077 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
SART3-209ENST00000548077 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
SART3-209ENST00000548077 MAGI1Q96QZ7 1491 aaPredicted RBP15□□□□□ -0.01
SART3-209ENST00000548077 RAD54L2Q9Y4B4 1467 aa14.99□□□□□ -0.01
SART3-209ENST00000548077 KIF13AQ9H1H9 1805 aa14.97□□□□□ -0.01
SART3-209ENST00000548077 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
SART3-209ENST00000548077 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
SART3-209ENST00000548077 WDR97A6NE52 1622 aa14.95□□□□□ -0.02
SART3-209ENST00000548077 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
SART3-209ENST00000548077 SOGA1O94964 1423 aa14.9□□□□□ -0.02
SART3-209ENST00000548077 HECW2Q9P2P5 1572 aa14.89□□□□□ -0.03
SART3-209ENST00000548077 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
SART3-209ENST00000548077 KDM6BO15054 1643 aa14.85□□□□□ -0.03
SART3-209ENST00000548077 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
SART3-209ENST00000548077 FBXO41Q8TF61 875 aa14.84□□□□□ -0.03
SART3-209ENST00000548077 CEP170Q5SW79 1584 aa14.82□□□□□ -0.04
SART3-209ENST00000548077 FAM69CQ0P6D2 419 aa14.81□□□□□ -0.04
SART3-209ENST00000548077 ADGRL1O94910 1474 aa14.81□□□□□ -0.04
SART3-209ENST00000548077 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
SART3-209ENST00000548077 DIP2BQ9P265 1576 aa14.79□□□□□ -0.04
SART3-209ENST00000548077 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
SART3-209ENST00000548077 SHROOM2Q13796 1616 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms