RNA–Protein interactions for RNA: ENST00000547987.2

PCBP2-211, Transcript of poly(rC) binding protein 2, humanhuman

TSL 3

Gene PCBP2, Length 681 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-211ENST00000547987 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
PCBP2-211ENST00000547987 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
PCBP2-211ENST00000547987 ABCC9O60706 1549 aa17.44■□□□□ 0.38
PCBP2-211ENST00000547987 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
PCBP2-211ENST00000547987 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
PCBP2-211ENST00000547987 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
PCBP2-211ENST00000547987 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
PCBP2-211ENST00000547987 NACADO15069 1562 aa17.05■□□□□ 0.32
PCBP2-211ENST00000547987 RB1CC1Q8TDY2 1594 aa16.97■□□□□ 0.31
PCBP2-211ENST00000547987 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
PCBP2-211ENST00000547987 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
PCBP2-211ENST00000547987 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
PCBP2-211ENST00000547987 BICRAQ9NZM4 1560 aa16.36■□□□□ 0.21
PCBP2-211ENST00000547987 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCBP2-211ENST00000547987 BAZ1AQ9NRL2 1556 aaPredicted RBP15.97■□□□□ 0.15
PCBP2-211ENST00000547987 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
PCBP2-211ENST00000547987 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
PCBP2-211ENST00000547987 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
PCBP2-211ENST00000547987 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
PCBP2-211ENST00000547987 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
PCBP2-211ENST00000547987 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
PCBP2-211ENST00000547987 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
PCBP2-211ENST00000547987 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
PCBP2-211ENST00000547987 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
PCBP2-211ENST00000547987 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
PCBP2-211ENST00000547987 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
PCBP2-211ENST00000547987 SUPT5HO00267 1087 aaKnown RBP15.67■□□□□ 0.1
PCBP2-211ENST00000547987 HMGXB3Q12766 1538 aa15.66■□□□□ 0.1
PCBP2-211ENST00000547987 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
PCBP2-211ENST00000547987 WIZO95785 1651 aa15.65■□□□□ 0.1
PCBP2-211ENST00000547987 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
PCBP2-211ENST00000547987 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
PCBP2-211ENST00000547987 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
PCBP2-211ENST00000547987 CFTRP13569 1480 aa15.26■□□□□ 0.03
PCBP2-211ENST00000547987 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
PCBP2-211ENST00000547987 PDS5BQ9NTI5 1447 aa15.18■□□□□ 0.02
PCBP2-211ENST00000547987 NESP48681 1621 aa15.15■□□□□ 0.02
PCBP2-211ENST00000547987 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
PCBP2-211ENST00000547987 ERCC6Q03468 1493 aa15.07■□□□□ 0
PCBP2-211ENST00000547987 PRDM2Q13029 1718 aa15.06■□□□□ 0
PCBP2-211ENST00000547987 CEP164Q9UPV0 1460 aa15.05■□□□□ -0
PCBP2-211ENST00000547987 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
PCBP2-211ENST00000547987 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
PCBP2-211ENST00000547987 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
PCBP2-211ENST00000547987 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
PCBP2-211ENST00000547987 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
PCBP2-211ENST00000547987 WDR62O43379 1518 aa14.87□□□□□ -0.03
PCBP2-211ENST00000547987 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
PCBP2-211ENST00000547987 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
PCBP2-211ENST00000547987 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
PCBP2-211ENST00000547987 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
PCBP2-211ENST00000547987 CUX1P39880 1505 aa14.84□□□□□ -0.03
PCBP2-211ENST00000547987 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
PCBP2-211ENST00000547987 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
PCBP2-211ENST00000547987 CUX2O14529 1486 aa14.8□□□□□ -0.04
PCBP2-211ENST00000547987 BIVM-ERCC5R4GMW8 1640 aa14.8□□□□□ -0.04
PCBP2-211ENST00000547987 SYNJ1O43426 1573 aa14.79□□□□□ -0.04
PCBP2-211ENST00000547987 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
PCBP2-211ENST00000547987 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
PCBP2-211ENST00000547987 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
PCBP2-211ENST00000547987 SOGA1O94964 1423 aa14.75□□□□□ -0.05
PCBP2-211ENST00000547987 IFT140Q96RY7 1462 aa14.74□□□□□ -0.05
PCBP2-211ENST00000547987 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
PCBP2-211ENST00000547987 RAD54L2Q9Y4B4 1467 aa14.66□□□□□ -0.06
PCBP2-211ENST00000547987 TARBP1Q13395 1621 aaKnown RBP14.64□□□□□ -0.07
PCBP2-211ENST00000547987 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
PCBP2-211ENST00000547987 KIF27Q86VH2 1401 aa14.63□□□□□ -0.07
PCBP2-211ENST00000547987 EEA1Q15075 1411 aa14.6□□□□□ -0.07
PCBP2-211ENST00000547987 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
PCBP2-211ENST00000547987 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
PCBP2-211ENST00000547987 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
PCBP2-211ENST00000547987 AQRO60306 1485 aaKnown RBP eCLIP14.55□□□□□ -0.085e-7■■■■■ 30.3
PCBP2-211ENST00000547987 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
PCBP2-211ENST00000547987 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
PCBP2-211ENST00000547987 EIF4G3O43432 1585 aaKnown RBP14.52□□□□□ -0.08
PCBP2-211ENST00000547987 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
PCBP2-211ENST00000547987 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
PCBP2-211ENST00000547987 IGF1RP08069 1367 aa14.49□□□□□ -0.09
PCBP2-211ENST00000547987 MAGI1Q96QZ7 1491 aaPredicted RBP14.47□□□□□ -0.09
PCBP2-211ENST00000547987 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
PCBP2-211ENST00000547987 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
PCBP2-211ENST00000547987 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
PCBP2-211ENST00000547987 CARMIL1Q5VZK9 1371 aa14.43□□□□□ -0.1
PCBP2-211ENST00000547987 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
PCBP2-211ENST00000547987 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
PCBP2-211ENST00000547987 CUL7Q14999 1698 aa14.42□□□□□ -0.1
PCBP2-211ENST00000547987 CHMP7Q8WUX9 453 aaPredicted RBP14.41□□□□□ -0.1
PCBP2-211ENST00000547987 SYNJ2O15056 1496 aa14.4□□□□□ -0.1
PCBP2-211ENST00000547987 PRXQ9BXM0 1461 aa14.39□□□□□ -0.11
PCBP2-211ENST00000547987 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
PCBP2-211ENST00000547987 ADAMTS12P58397 1594 aa14.37□□□□□ -0.11
PCBP2-211ENST00000547987 FBLN2P98095 1184 aa14.36□□□□□ -0.11
PCBP2-211ENST00000547987 GRIN2AQ12879 1464 aa14.33□□□□□ -0.12
PCBP2-211ENST00000547987 KIF21BO75037 1637 aa14.33□□□□□ -0.12
PCBP2-211ENST00000547987 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
PCBP2-211ENST00000547987 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
PCBP2-211ENST00000547987 UBTFP17480 764 aaKnown RBP14.27□□□□□ -0.13
PCBP2-211ENST00000547987 NUP160Q12769 1436 aa14.25□□□□□ -0.13
PCBP2-211ENST00000547987 KIAA0586Q9BVV6 1533 aa14.23□□□□□ -0.13
PCBP2-211ENST00000547987 CHD1O14646 1710 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms