RNA–Protein interactions for RNA: ENST00000547955.5

TPCN1-210, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-210ENST00000547955 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
TPCN1-210ENST00000547955 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
TPCN1-210ENST00000547955 ABCC9O60706 1549 aa22.44■■□□□ 1.18
TPCN1-210ENST00000547955 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.12
TPCN1-210ENST00000547955 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
TPCN1-210ENST00000547955 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
TPCN1-210ENST00000547955 NACADO15069 1562 aa21.78■■□□□ 1.08
TPCN1-210ENST00000547955 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
TPCN1-210ENST00000547955 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
TPCN1-210ENST00000547955 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
TPCN1-210ENST00000547955 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
TPCN1-210ENST00000547955 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
TPCN1-210ENST00000547955 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.97
TPCN1-210ENST00000547955 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
TPCN1-210ENST00000547955 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
TPCN1-210ENST00000547955 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
TPCN1-210ENST00000547955 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
TPCN1-210ENST00000547955 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
TPCN1-210ENST00000547955 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
TPCN1-210ENST00000547955 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
TPCN1-210ENST00000547955 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
TPCN1-210ENST00000547955 WIZO95785 1651 aa20.26■□□□□ 0.83
TPCN1-210ENST00000547955 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
TPCN1-210ENST00000547955 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
TPCN1-210ENST00000547955 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
TPCN1-210ENST00000547955 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
TPCN1-210ENST00000547955 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
TPCN1-210ENST00000547955 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
TPCN1-210ENST00000547955 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
TPCN1-210ENST00000547955 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
TPCN1-210ENST00000547955 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
TPCN1-210ENST00000547955 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
TPCN1-210ENST00000547955 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
TPCN1-210ENST00000547955 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
TPCN1-210ENST00000547955 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
TPCN1-210ENST00000547955 NESP48681 1621 aa19.55■□□□□ 0.72
TPCN1-210ENST00000547955 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
TPCN1-210ENST00000547955 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
TPCN1-210ENST00000547955 CFTRP13569 1480 aa19.48■□□□□ 0.71
TPCN1-210ENST00000547955 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
TPCN1-210ENST00000547955 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
TPCN1-210ENST00000547955 FANCD2Q9BXW9 1451 aa19.33■□□□□ 0.68
TPCN1-210ENST00000547955 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
TPCN1-210ENST00000547955 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
TPCN1-210ENST00000547955 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
TPCN1-210ENST00000547955 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
TPCN1-210ENST00000547955 MRC2Q9UBG0 1479 aa19.15■□□□□ 0.66
TPCN1-210ENST00000547955 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
TPCN1-210ENST00000547955 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
TPCN1-210ENST00000547955 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
TPCN1-210ENST00000547955 CUX1P39880 1505 aa19.1■□□□□ 0.65
TPCN1-210ENST00000547955 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
TPCN1-210ENST00000547955 WDR62O43379 1518 aa19.08■□□□□ 0.64
TPCN1-210ENST00000547955 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
TPCN1-210ENST00000547955 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
TPCN1-210ENST00000547955 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
TPCN1-210ENST00000547955 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
TPCN1-210ENST00000547955 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
TPCN1-210ENST00000547955 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
TPCN1-210ENST00000547955 CUX2O14529 1486 aa18.9■□□□□ 0.62
TPCN1-210ENST00000547955 RAD54L2Q9Y4B4 1467 aa18.87■□□□□ 0.61
TPCN1-210ENST00000547955 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
TPCN1-210ENST00000547955 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
TPCN1-210ENST00000547955 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
TPCN1-210ENST00000547955 SOGA1O94964 1423 aa18.84■□□□□ 0.61
TPCN1-210ENST00000547955 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
TPCN1-210ENST00000547955 ABCA10Q8WWZ4 1543 aa18.76■□□□□ 0.59
TPCN1-210ENST00000547955 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
TPCN1-210ENST00000547955 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
TPCN1-210ENST00000547955 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
TPCN1-210ENST00000547955 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.59
TPCN1-210ENST00000547955 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
TPCN1-210ENST00000547955 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.582e-7■■■■■ 37.8
TPCN1-210ENST00000547955 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
TPCN1-210ENST00000547955 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
TPCN1-210ENST00000547955 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
TPCN1-210ENST00000547955 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
TPCN1-210ENST00000547955 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
TPCN1-210ENST00000547955 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
TPCN1-210ENST00000547955 EEA1Q15075 1411 aa18.55■□□□□ 0.56
TPCN1-210ENST00000547955 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
TPCN1-210ENST00000547955 CUL7Q14999 1698 aa18.53■□□□□ 0.56
TPCN1-210ENST00000547955 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
TPCN1-210ENST00000547955 IGF1RP08069 1367 aa18.5■□□□□ 0.55
TPCN1-210ENST00000547955 CHD1O14646 1710 aa18.49■□□□□ 0.55
TPCN1-210ENST00000547955 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
TPCN1-210ENST00000547955 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
TPCN1-210ENST00000547955 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
TPCN1-210ENST00000547955 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
TPCN1-210ENST00000547955 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
TPCN1-210ENST00000547955 KIF21BO75037 1637 aa18.41■□□□□ 0.54
TPCN1-210ENST00000547955 FBLN2P98095 1184 aa18.39■□□□□ 0.53
TPCN1-210ENST00000547955 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.53
TPCN1-210ENST00000547955 PRXQ9BXM0 1461 aa18.39■□□□□ 0.53
TPCN1-210ENST00000547955 RAPGEF2Q9Y4G8 1499 aa18.38■□□□□ 0.53
TPCN1-210ENST00000547955 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
TPCN1-210ENST00000547955 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
TPCN1-210ENST00000547955 CTTNBP2Q8WZ74 1663 aa18.32■□□□□ 0.52
TPCN1-210ENST00000547955 GOLGA3Q08378 1498 aa18.3■□□□□ 0.52
TPCN1-210ENST00000547955 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms