RNA–Protein interactions for RNA: ENST00000547440.1

PPHLN1-210, Transcript of periphilin 1, humanhuman

TSL 2

Gene PPHLN1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-210ENST00000547440 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
PPHLN1-210ENST00000547440 CCDC180Q9P1Z9 1646 aa30.38■■■□□ 2.45
PPHLN1-210ENST00000547440 ABCC9O60706 1549 aa29.57■■■□□ 2.32
PPHLN1-210ENST00000547440 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
PPHLN1-210ENST00000547440 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
PPHLN1-210ENST00000547440 NACADO15069 1562 aa28.51■■■□□ 2.15
PPHLN1-210ENST00000547440 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
PPHLN1-210ENST00000547440 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
PPHLN1-210ENST00000547440 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
PPHLN1-210ENST00000547440 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
PPHLN1-210ENST00000547440 SCRIBQ14160 1630 aa27.71■■■□□ 2.03
PPHLN1-210ENST00000547440 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
PPHLN1-210ENST00000547440 BICRAQ9NZM4 1560 aa27.62■■■□□ 2.01
PPHLN1-210ENST00000547440 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
PPHLN1-210ENST00000547440 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
PPHLN1-210ENST00000547440 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
PPHLN1-210ENST00000547440 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
PPHLN1-210ENST00000547440 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
PPHLN1-210ENST00000547440 SMARCA4P51532 1647 aa26.51■■□□□ 1.83
PPHLN1-210ENST00000547440 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
PPHLN1-210ENST00000547440 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
PPHLN1-210ENST00000547440 MROH2BQ7Z745 1585 aa26.32■■□□□ 1.8
PPHLN1-210ENST00000547440 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
PPHLN1-210ENST00000547440 NCAPD3P42695 1498 aa26.27■■□□□ 1.8
PPHLN1-210ENST00000547440 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
PPHLN1-210ENST00000547440 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
PPHLN1-210ENST00000547440 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
PPHLN1-210ENST00000547440 WIZO95785 1651 aa26.08■■□□□ 1.77
PPHLN1-210ENST00000547440 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
PPHLN1-210ENST00000547440 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
PPHLN1-210ENST00000547440 NESP48681 1621 aa25.61■■□□□ 1.69
PPHLN1-210ENST00000547440 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
PPHLN1-210ENST00000547440 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
PPHLN1-210ENST00000547440 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
PPHLN1-210ENST00000547440 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
PPHLN1-210ENST00000547440 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
PPHLN1-210ENST00000547440 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
PPHLN1-210ENST00000547440 CFTRP13569 1480 aa25.39■■□□□ 1.66
PPHLN1-210ENST00000547440 KIF21AQ7Z4S6 1674 aa25.37■■□□□ 1.65
PPHLN1-210ENST00000547440 PRDM2Q13029 1718 aa25.31■■□□□ 1.64
PPHLN1-210ENST00000547440 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
PPHLN1-210ENST00000547440 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
PPHLN1-210ENST00000547440 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
PPHLN1-210ENST00000547440 CUX2O14529 1486 aa25.18■■□□□ 1.62
PPHLN1-210ENST00000547440 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.62
PPHLN1-210ENST00000547440 WDR62O43379 1518 aa25.05■■□□□ 1.6
PPHLN1-210ENST00000547440 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
PPHLN1-210ENST00000547440 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
PPHLN1-210ENST00000547440 TOPBP1Q92547 1522 aa24.85■■□□□ 1.57
PPHLN1-210ENST00000547440 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
PPHLN1-210ENST00000547440 CUX1P39880 1505 aa24.69■■□□□ 1.54
PPHLN1-210ENST00000547440 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
PPHLN1-210ENST00000547440 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
PPHLN1-210ENST00000547440 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
PPHLN1-210ENST00000547440 WRNQ14191 1432 aaPredicted RBP eCLIP24.59■■□□□ 1.53
PPHLN1-210ENST00000547440 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
PPHLN1-210ENST00000547440 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
PPHLN1-210ENST00000547440 SOGA1O94964 1423 aa24.54■■□□□ 1.52
PPHLN1-210ENST00000547440 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
PPHLN1-210ENST00000547440 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
PPHLN1-210ENST00000547440 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
PPHLN1-210ENST00000547440 ZNF608Q9ULD9 1512 aaPredicted RBP24.52■■□□□ 1.52
PPHLN1-210ENST00000547440 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
PPHLN1-210ENST00000547440 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
PPHLN1-210ENST00000547440 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.5
PPHLN1-210ENST00000547440 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
PPHLN1-210ENST00000547440 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
PPHLN1-210ENST00000547440 ABCA5Q8WWZ7 1642 aa24.28■■□□□ 1.48
PPHLN1-210ENST00000547440 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
PPHLN1-210ENST00000547440 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
PPHLN1-210ENST00000547440 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
PPHLN1-210ENST00000547440 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
PPHLN1-210ENST00000547440 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.46
PPHLN1-210ENST00000547440 MAGI1Q96QZ7 1491 aaPredicted RBP24.19■■□□□ 1.46
PPHLN1-210ENST00000547440 CHD1O14646 1710 aa24.18■■□□□ 1.46
PPHLN1-210ENST00000547440 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
PPHLN1-210ENST00000547440 FBLN2P98095 1184 aa24.13■■□□□ 1.45
PPHLN1-210ENST00000547440 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
PPHLN1-210ENST00000547440 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
PPHLN1-210ENST00000547440 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
PPHLN1-210ENST00000547440 KIF27Q86VH2 1401 aa24.08■■□□□ 1.45
PPHLN1-210ENST00000547440 CHMP7Q8WUX9 453 aaPredicted RBP24.08■■□□□ 1.45
PPHLN1-210ENST00000547440 ADAMTS12P58397 1594 aa24.04■■□□□ 1.44
PPHLN1-210ENST00000547440 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
PPHLN1-210ENST00000547440 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
PPHLN1-210ENST00000547440 CUL7Q14999 1698 aa23.93■■□□□ 1.42
PPHLN1-210ENST00000547440 IGF1RP08069 1367 aa23.92■■□□□ 1.42
PPHLN1-210ENST00000547440 CLASP1Q7Z460 1538 aa23.86■■□□□ 1.41
PPHLN1-210ENST00000547440 RUSC2Q8N2Y8 1516 aa23.86■■□□□ 1.41
PPHLN1-210ENST00000547440 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
PPHLN1-210ENST00000547440 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
PPHLN1-210ENST00000547440 CARMIL1Q5VZK9 1371 aa23.81■■□□□ 1.4
PPHLN1-210ENST00000547440 NUP160Q12769 1436 aa23.81■■□□□ 1.4
PPHLN1-210ENST00000547440 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
PPHLN1-210ENST00000547440 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
PPHLN1-210ENST00000547440 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
PPHLN1-210ENST00000547440 ARHGEF11O15085 1522 aa23.76■■□□□ 1.39
PPHLN1-210ENST00000547440 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
PPHLN1-210ENST00000547440 EEA1Q15075 1411 aa23.7■■□□□ 1.38
PPHLN1-210ENST00000547440 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms