RNA–Protein interactions for RNA: ENST00000547029.5

LETMD1-207, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-207ENST00000547029 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
LETMD1-207ENST00000547029 ABCC9O60706 1549 aa13.77□□□□□ -0.21
LETMD1-207ENST00000547029 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
LETMD1-207ENST00000547029 CCDC180Q9P1Z9 1646 aa13.06□□□□□ -0.32
LETMD1-207ENST00000547029 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
LETMD1-207ENST00000547029 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
LETMD1-207ENST00000547029 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
LETMD1-207ENST00000547029 NACADO15069 1562 aa12.6□□□□□ -0.39
LETMD1-207ENST00000547029 BICRAQ9NZM4 1560 aa12.47□□□□□ -0.41
LETMD1-207ENST00000547029 DNAJC5Q9H3Z4 198 aa12.39□□□□□ -0.43
LETMD1-207ENST00000547029 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
LETMD1-207ENST00000547029 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
LETMD1-207ENST00000547029 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
LETMD1-207ENST00000547029 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
LETMD1-207ENST00000547029 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
LETMD1-207ENST00000547029 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
LETMD1-207ENST00000547029 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
LETMD1-207ENST00000547029 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
LETMD1-207ENST00000547029 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
LETMD1-207ENST00000547029 CHIC1Q5VXU3 224 aa12.04□□□□□ -0.48
LETMD1-207ENST00000547029 AEBP2Q6ZN18 517 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-207ENST00000547029 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
LETMD1-207ENST00000547029 CUX2O14529 1486 aa11.82□□□□□ -0.52
LETMD1-207ENST00000547029 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
LETMD1-207ENST00000547029 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
LETMD1-207ENST00000547029 NESP48681 1621 aa11.75□□□□□ -0.53
LETMD1-207ENST00000547029 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
LETMD1-207ENST00000547029 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
LETMD1-207ENST00000547029 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
LETMD1-207ENST00000547029 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
LETMD1-207ENST00000547029 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
LETMD1-207ENST00000547029 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
LETMD1-207ENST00000547029 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
LETMD1-207ENST00000547029 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
LETMD1-207ENST00000547029 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
LETMD1-207ENST00000547029 MROH2BQ7Z745 1585 aa11.44□□□□□ -0.58
LETMD1-207ENST00000547029 BAZ1AQ9NRL2 1556 aaPredicted RBP11.4□□□□□ -0.58
LETMD1-207ENST00000547029 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
LETMD1-207ENST00000547029 MRC2Q9UBG0 1479 aa11.37□□□□□ -0.59
LETMD1-207ENST00000547029 PEG3Q9GZU2 1588 aa11.34□□□□□ -0.59
LETMD1-207ENST00000547029 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
LETMD1-207ENST00000547029 WDR62O43379 1518 aa11.29□□□□□ -0.6
LETMD1-207ENST00000547029 FANCD2Q9BXW9 1451 aa11.28□□□□□ -0.6
LETMD1-207ENST00000547029 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
LETMD1-207ENST00000547029 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
LETMD1-207ENST00000547029 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
LETMD1-207ENST00000547029 URB2Q14146 1524 aaKnown RBP11.21□□□□□ -0.61
LETMD1-207ENST00000547029 CFTRP13569 1480 aa11.2□□□□□ -0.62
LETMD1-207ENST00000547029 ZNF608Q9ULD9 1512 aaPredicted RBP11.18□□□□□ -0.62
LETMD1-207ENST00000547029 WIZO95785 1651 aa11.17□□□□□ -0.62
LETMD1-207ENST00000547029 RSF1Q96T23 1441 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-207ENST00000547029 FBLN2P98095 1184 aa11.15□□□□□ -0.62
LETMD1-207ENST00000547029 ARHGEF11O15085 1522 aa11.11□□□□□ -0.63
LETMD1-207ENST00000547029 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
LETMD1-207ENST00000547029 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
LETMD1-207ENST00000547029 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
LETMD1-207ENST00000547029 AQRO60306 1485 aaKnown RBP eCLIP11.09□□□□□ -0.631e-6■■□□□ 12.7
LETMD1-207ENST00000547029 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
LETMD1-207ENST00000547029 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
LETMD1-207ENST00000547029 ARAP1Q96P48 1450 aa11.03□□□□□ -0.64
LETMD1-207ENST00000547029 TDRD9Q8NDG6 1382 aaKnown RBP11.02□□□□□ -0.65
LETMD1-207ENST00000547029 TOPBP1Q92547 1522 aa11□□□□□ -0.65
LETMD1-207ENST00000547029 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
LETMD1-207ENST00000547029 RAD54L2Q9Y4B4 1467 aa10.96□□□□□ -0.65
LETMD1-207ENST00000547029 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.65
LETMD1-207ENST00000547029 SOGA1O94964 1423 aa10.92□□□□□ -0.66
LETMD1-207ENST00000547029 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
LETMD1-207ENST00000547029 EIF4G3O43432 1585 aaKnown RBP10.88□□□□□ -0.67
LETMD1-207ENST00000547029 ABCC8Q09428 1581 aa10.86□□□□□ -0.67
LETMD1-207ENST00000547029 SNAPC4Q5SXM2 1469 aa10.85□□□□□ -0.67
LETMD1-207ENST00000547029 DNMBPQ6XZF7 1577 aa10.84□□□□□ -0.67
LETMD1-207ENST00000547029 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
LETMD1-207ENST00000547029 GAPVD1Q14C86 1478 aa10.8□□□□□ -0.68
LETMD1-207ENST00000547029 FGD5Q6ZNL6 1462 aa10.79□□□□□ -0.68
LETMD1-207ENST00000547029 CLASP1Q7Z460 1538 aa10.78□□□□□ -0.68
LETMD1-207ENST00000547029 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
LETMD1-207ENST00000547029 CHD1O14646 1710 aa10.76□□□□□ -0.69
LETMD1-207ENST00000547029 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
LETMD1-207ENST00000547029 PHF23Q9BUL5 403 aaPredicted RBP10.74□□□□□ -0.69
LETMD1-207ENST00000547029 CUX1P39880 1505 aa10.73□□□□□ -0.69
LETMD1-207ENST00000547029 MAGI1Q96QZ7 1491 aaPredicted RBP10.72□□□□□ -0.69
LETMD1-207ENST00000547029 ERCC6L2Q5T890 1561 aa10.71□□□□□ -0.69
LETMD1-207ENST00000547029 KDM4FA0A1W2PPD8 638 aa10.69□□□□□ -0.7
LETMD1-207ENST00000547029 FAM69CQ0P6D2 419 aa10.69□□□□□ -0.7
LETMD1-207ENST00000547029 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
LETMD1-207ENST00000547029 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
LETMD1-207ENST00000547029 JPH4Q96JJ6 628 aa10.66□□□□□ -0.7
LETMD1-207ENST00000547029 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
LETMD1-207ENST00000547029 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
LETMD1-207ENST00000547029 NUP160Q12769 1436 aa10.61□□□□□ -0.71
LETMD1-207ENST00000547029 PRG4Q92954 1404 aaPredicted RBP10.61□□□□□ -0.71
LETMD1-207ENST00000547029 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
LETMD1-207ENST00000547029 PRDM2Q13029 1718 aa10.6□□□□□ -0.71
LETMD1-207ENST00000547029 NPM1P06748 294 aaKnown RBP eCLIP10.59□□□□□ -0.71
LETMD1-207ENST00000547029 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
LETMD1-207ENST00000547029 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
LETMD1-207ENST00000547029 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
LETMD1-207ENST00000547029 FHAD1B1AJZ9 1412 aa10.56□□□□□ -0.72
LETMD1-207ENST00000547029 WDR97A6NE52 1622 aa10.54□□□□□ -0.72
LETMD1-207ENST00000547029 ABCC10Q5T3U5 1492 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms