RNA–Protein interactions for RNA: ENST00000546840.2

AC002996.1-201, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AC002996.1, Length 784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002996.1-201ENST00000546840 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
AC002996.1-201ENST00000546840 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
AC002996.1-201ENST00000546840 ABCC9O60706 1549 aa28.64■■■□□ 2.17
AC002996.1-201ENST00000546840 RB1CC1Q8TDY2 1594 aa27.28■■□□□ 1.96
AC002996.1-201ENST00000546840 NACADO15069 1562 aa27.03■■□□□ 1.92
AC002996.1-201ENST00000546840 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
AC002996.1-201ENST00000546840 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
AC002996.1-201ENST00000546840 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
AC002996.1-201ENST00000546840 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
AC002996.1-201ENST00000546840 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
AC002996.1-201ENST00000546840 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
AC002996.1-201ENST00000546840 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
AC002996.1-201ENST00000546840 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
AC002996.1-201ENST00000546840 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
AC002996.1-201ENST00000546840 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
AC002996.1-201ENST00000546840 CC2D2AQ9P2K1 1620 aa25.95■■□□□ 1.74
AC002996.1-201ENST00000546840 EIF4G1Q04637 1599 aaKnown RBP25.85■■□□□ 1.73
AC002996.1-201ENST00000546840 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
AC002996.1-201ENST00000546840 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
AC002996.1-201ENST00000546840 CUX2O14529 1486 aa24.89■■□□□ 1.57
AC002996.1-201ENST00000546840 NCAPD3P42695 1498 aa24.87■■□□□ 1.57
AC002996.1-201ENST00000546840 ERCC6Q03468 1493 aa24.79■■□□□ 1.56
AC002996.1-201ENST00000546840 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
AC002996.1-201ENST00000546840 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
AC002996.1-201ENST00000546840 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
AC002996.1-201ENST00000546840 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
AC002996.1-201ENST00000546840 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
AC002996.1-201ENST00000546840 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
AC002996.1-201ENST00000546840 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
AC002996.1-201ENST00000546840 NESP48681 1621 aa24.53■■□□□ 1.52
AC002996.1-201ENST00000546840 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
AC002996.1-201ENST00000546840 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
AC002996.1-201ENST00000546840 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
AC002996.1-201ENST00000546840 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
AC002996.1-201ENST00000546840 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
AC002996.1-201ENST00000546840 WDR62O43379 1518 aa24.07■■□□□ 1.44
AC002996.1-201ENST00000546840 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
AC002996.1-201ENST00000546840 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
AC002996.1-201ENST00000546840 WIZO95785 1651 aa24.06■■□□□ 1.44
AC002996.1-201ENST00000546840 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
AC002996.1-201ENST00000546840 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
AC002996.1-201ENST00000546840 CFTRP13569 1480 aa23.8■■□□□ 1.4
AC002996.1-201ENST00000546840 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
AC002996.1-201ENST00000546840 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
AC002996.1-201ENST00000546840 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
AC002996.1-201ENST00000546840 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
AC002996.1-201ENST00000546840 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
AC002996.1-201ENST00000546840 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
AC002996.1-201ENST00000546840 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
AC002996.1-201ENST00000546840 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
AC002996.1-201ENST00000546840 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
AC002996.1-201ENST00000546840 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
AC002996.1-201ENST00000546840 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
AC002996.1-201ENST00000546840 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
AC002996.1-201ENST00000546840 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
AC002996.1-201ENST00000546840 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
AC002996.1-201ENST00000546840 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
AC002996.1-201ENST00000546840 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
AC002996.1-201ENST00000546840 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
AC002996.1-201ENST00000546840 CHD1O14646 1710 aa23.27■■□□□ 1.32
AC002996.1-201ENST00000546840 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
AC002996.1-201ENST00000546840 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
AC002996.1-201ENST00000546840 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
AC002996.1-201ENST00000546840 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.295e-6■■□□□ 14.3
AC002996.1-201ENST00000546840 ARAP1Q96P48 1450 aa23.04■■□□□ 1.28
AC002996.1-201ENST00000546840 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
AC002996.1-201ENST00000546840 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
AC002996.1-201ENST00000546840 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
AC002996.1-201ENST00000546840 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
AC002996.1-201ENST00000546840 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
AC002996.1-201ENST00000546840 SOGA1O94964 1423 aa22.93■■□□□ 1.26
AC002996.1-201ENST00000546840 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
AC002996.1-201ENST00000546840 MAGI1Q96QZ7 1491 aaPredicted RBP22.91■■□□□ 1.26
AC002996.1-201ENST00000546840 FBLN2P98095 1184 aa22.9■■□□□ 1.26
AC002996.1-201ENST00000546840 CUX1P39880 1505 aa22.88■■□□□ 1.25
AC002996.1-201ENST00000546840 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
AC002996.1-201ENST00000546840 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
AC002996.1-201ENST00000546840 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
AC002996.1-201ENST00000546840 SYNJ2O15056 1496 aa22.8■■□□□ 1.24
AC002996.1-201ENST00000546840 TRHP20396 242 aaPredicted RBP22.79■■□□□ 1.24
AC002996.1-201ENST00000546840 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
AC002996.1-201ENST00000546840 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
AC002996.1-201ENST00000546840 GAPVD1Q14C86 1478 aa22.71■■□□□ 1.23
AC002996.1-201ENST00000546840 ABCA10Q8WWZ4 1543 aa22.68■■□□□ 1.22
AC002996.1-201ENST00000546840 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
AC002996.1-201ENST00000546840 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
AC002996.1-201ENST00000546840 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
AC002996.1-201ENST00000546840 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
AC002996.1-201ENST00000546840 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
AC002996.1-201ENST00000546840 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
AC002996.1-201ENST00000546840 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.191e-6■■■■■ 58.5
AC002996.1-201ENST00000546840 ERCC6L2Q5T890 1561 aa22.49■■□□□ 1.19
AC002996.1-201ENST00000546840 NUP160Q12769 1436 aa22.48■■□□□ 1.19
AC002996.1-201ENST00000546840 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
AC002996.1-201ENST00000546840 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
AC002996.1-201ENST00000546840 KIF13AQ9H1H9 1805 aa22.36■■□□□ 1.17
AC002996.1-201ENST00000546840 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
AC002996.1-201ENST00000546840 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
AC002996.1-201ENST00000546840 RUSC2Q8N2Y8 1516 aa22.3■■□□□ 1.16
AC002996.1-201ENST00000546840 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms