RNA–Protein interactions for RNA: ENST00000546542.1

KRT8-202, Transcript of keratin 8, humanhuman

TSL 3

Gene KRT8, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-202ENST00000546542 NISCHQ9Y2I1 1504 aa43.73■■■■■ 4.59
KRT8-202ENST00000546542 CCDC180Q9P1Z9 1646 aa38.82■■■■□ 3.81
KRT8-202ENST00000546542 ABCC9O60706 1549 aa37.84■■■■□ 3.65
KRT8-202ENST00000546542 NACADO15069 1562 aa36.53■■■■□ 3.44
KRT8-202ENST00000546542 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
KRT8-202ENST00000546542 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
KRT8-202ENST00000546542 ZCCHC6Q5VYS8 1495 aaKnown RBP36.44■■■■□ 3.42
KRT8-202ENST00000546542 MYO15BQ96JP2 1530 aa36.41■■■■□ 3.42
KRT8-202ENST00000546542 DCAF1Q9Y4B6 1507 aa36.26■■■■□ 3.4
KRT8-202ENST00000546542 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
KRT8-202ENST00000546542 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
KRT8-202ENST00000546542 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
KRT8-202ENST00000546542 BICRAQ9NZM4 1560 aa35.32■■■■□ 3.24
KRT8-202ENST00000546542 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
KRT8-202ENST00000546542 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
KRT8-202ENST00000546542 EIF4G1Q04637 1599 aaKnown RBP34.42■■■■□ 3.1
KRT8-202ENST00000546542 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
KRT8-202ENST00000546542 CECR2Q9BXF3 1484 aa34.04■■■■□ 3.04
KRT8-202ENST00000546542 BAZ1AQ9NRL2 1556 aaPredicted RBP33.92■■■■□ 3.02
KRT8-202ENST00000546542 SMARCA4P51532 1647 aa33.87■■■■□ 3.01
KRT8-202ENST00000546542 NCAPD3P42695 1498 aa33.72■■■□□ 2.99
KRT8-202ENST00000546542 SMARCA2P51531 1590 aa33.72■■■□□ 2.99
KRT8-202ENST00000546542 ATAD2BQ9ULI0 1458 aa33.71■■■□□ 2.99
KRT8-202ENST00000546542 MROH2BQ7Z745 1585 aa33.65■■■□□ 2.98
KRT8-202ENST00000546542 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
KRT8-202ENST00000546542 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
KRT8-202ENST00000546542 BAZ1BQ9UIG0 1483 aaKnown RBP33.45■■■□□ 2.95
KRT8-202ENST00000546542 RSF1Q96T23 1441 aaPredicted RBP33.36■■■□□ 2.93
KRT8-202ENST00000546542 WIZO95785 1651 aa33.24■■■□□ 2.91
KRT8-202ENST00000546542 TOP2AP11388 1531 aaKnown RBP33■■■□□ 2.87
KRT8-202ENST00000546542 LAMC3Q9Y6N6 1575 aa32.79■■■□□ 2.84
KRT8-202ENST00000546542 CADPSQ9ULU8 1353 aa32.75■■■□□ 2.83
KRT8-202ENST00000546542 NESP48681 1621 aa32.74■■■□□ 2.83
KRT8-202ENST00000546542 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
KRT8-202ENST00000546542 PDS5BQ9NTI5 1447 aa32.63■■■□□ 2.81
KRT8-202ENST00000546542 CCDC88BA6NC98 1476 aa32.6■■■□□ 2.81
KRT8-202ENST00000546542 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
KRT8-202ENST00000546542 CFTRP13569 1480 aa32.55■■■□□ 2.8
KRT8-202ENST00000546542 CUX2O14529 1486 aa32.33■■■□□ 2.77
KRT8-202ENST00000546542 FANCD2Q9BXW9 1451 aa32.33■■■□□ 2.77
KRT8-202ENST00000546542 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
KRT8-202ENST00000546542 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
KRT8-202ENST00000546542 THOC2Q8NI27 1593 aaKnown RBP32.23■■■□□ 2.75
KRT8-202ENST00000546542 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
KRT8-202ENST00000546542 PRDM2Q13029 1718 aa32.18■■■□□ 2.74
KRT8-202ENST00000546542 WDR62O43379 1518 aa32.08■■■□□ 2.73
KRT8-202ENST00000546542 URB2Q14146 1524 aaKnown RBP31.95■■■□□ 2.7
KRT8-202ENST00000546542 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
KRT8-202ENST00000546542 TOPBP1Q92547 1522 aa31.8■■■□□ 2.68
KRT8-202ENST00000546542 DNMBPQ6XZF7 1577 aa31.79■■■□□ 2.68
KRT8-202ENST00000546542 IFT140Q96RY7 1462 aa31.65■■■□□ 2.66
KRT8-202ENST00000546542 CUX1P39880 1505 aa31.57■■■□□ 2.64
KRT8-202ENST00000546542 POLA1P09884 1462 aaPredicted RBP31.54■■■□□ 2.64
KRT8-202ENST00000546542 WRNQ14191 1432 aaPredicted RBP eCLIP31.49■■■□□ 2.63
KRT8-202ENST00000546542 FGD5Q6ZNL6 1462 aa31.47■■■□□ 2.63
KRT8-202ENST00000546542 SOGA1O94964 1423 aa31.47■■■□□ 2.63
KRT8-202ENST00000546542 TARBP1Q13395 1621 aaKnown RBP31.41■■■□□ 2.62
KRT8-202ENST00000546542 ZNF608Q9ULD9 1512 aaPredicted RBP31.38■■■□□ 2.61
KRT8-202ENST00000546542 TOP2BQ02880 1626 aa31.36■■■□□ 2.61
KRT8-202ENST00000546542 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
KRT8-202ENST00000546542 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
KRT8-202ENST00000546542 WDR97A6NE52 1622 aa31.29■■■□□ 2.6
KRT8-202ENST00000546542 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
KRT8-202ENST00000546542 EIF4G3O43432 1585 aaKnown RBP31.26■■■□□ 2.59
KRT8-202ENST00000546542 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.59
KRT8-202ENST00000546542 TDRD9Q8NDG6 1382 aaKnown RBP31.24■■■□□ 2.59
KRT8-202ENST00000546542 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
KRT8-202ENST00000546542 DNAJC5Q9H3Z4 198 aa31.21■■■□□ 2.59
KRT8-202ENST00000546542 GRIN2BQ13224 1484 aa31.09■■■□□ 2.57
KRT8-202ENST00000546542 GAPVD1Q14C86 1478 aa31.09■■■□□ 2.57
KRT8-202ENST00000546542 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
KRT8-202ENST00000546542 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
KRT8-202ENST00000546542 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.55
KRT8-202ENST00000546542 SNAPC4Q5SXM2 1469 aa30.97■■■□□ 2.55
KRT8-202ENST00000546542 FBLN2P98095 1184 aa30.9■■■□□ 2.54
KRT8-202ENST00000546542 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
KRT8-202ENST00000546542 PBRM1Q86U86 1689 aa30.89■■■□□ 2.54
KRT8-202ENST00000546542 KIF27Q86VH2 1401 aa30.87■■■□□ 2.53
KRT8-202ENST00000546542 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
KRT8-202ENST00000546542 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
KRT8-202ENST00000546542 ERICH3Q5RHP9 1530 aa30.86■■■□□ 2.53
KRT8-202ENST00000546542 CHD1O14646 1710 aa30.78■■■□□ 2.52
KRT8-202ENST00000546542 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
KRT8-202ENST00000546542 ADAMTS12P58397 1594 aa30.72■■■□□ 2.51
KRT8-202ENST00000546542 IGF1RP08069 1367 aa30.68■■■□□ 2.5
KRT8-202ENST00000546542 GRIN2AQ12879 1464 aa30.66■■■□□ 2.5
KRT8-202ENST00000546542 CUL7Q14999 1698 aa30.56■■■□□ 2.48
KRT8-202ENST00000546542 CLASP1Q7Z460 1538 aa30.54■■■□□ 2.48
KRT8-202ENST00000546542 NUP160Q12769 1436 aa30.54■■■□□ 2.48
KRT8-202ENST00000546542 CARMIL1Q5VZK9 1371 aa30.53■■■□□ 2.48
KRT8-202ENST00000546542 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
KRT8-202ENST00000546542 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.47
KRT8-202ENST00000546542 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
KRT8-202ENST00000546542 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
KRT8-202ENST00000546542 EEA1Q15075 1411 aa30.39■■■□□ 2.46
KRT8-202ENST00000546542 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
KRT8-202ENST00000546542 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
KRT8-202ENST00000546542 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
KRT8-202ENST00000546542 RAPGEF2Q9Y4G8 1499 aa30.35■■■□□ 2.45
KRT8-202ENST00000546542 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms