RNA–Protein interactions for RNA: ENST00000546328.1

ACACB-215, Transcript of acetyl-CoA carboxylase beta, humanhuman

TSL 3

Gene ACACB, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACB-215ENST00000546328 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
ACACB-215ENST00000546328 ABCC9O60706 1549 aa17■□□□□ 0.31
ACACB-215ENST00000546328 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
ACACB-215ENST00000546328 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
ACACB-215ENST00000546328 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.16
ACACB-215ENST00000546328 NACADO15069 1562 aa15.87■□□□□ 0.13
ACACB-215ENST00000546328 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
ACACB-215ENST00000546328 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
ACACB-215ENST00000546328 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
ACACB-215ENST00000546328 UNC13AQ9UPW8 1703 aa15.72■□□□□ 0.11
ACACB-215ENST00000546328 DCAF1Q9Y4B6 1507 aa15.69■□□□□ 0.1
ACACB-215ENST00000546328 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
ACACB-215ENST00000546328 BICRAQ9NZM4 1560 aa15.64■□□□□ 0.09
ACACB-215ENST00000546328 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
ACACB-215ENST00000546328 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
ACACB-215ENST00000546328 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
ACACB-215ENST00000546328 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
ACACB-215ENST00000546328 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
ACACB-215ENST00000546328 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
ACACB-215ENST00000546328 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
ACACB-215ENST00000546328 CUX2O14529 1486 aa14.64□□□□□ -0.07
ACACB-215ENST00000546328 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
ACACB-215ENST00000546328 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
ACACB-215ENST00000546328 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
ACACB-215ENST00000546328 NESP48681 1621 aa14.57□□□□□ -0.08
ACACB-215ENST00000546328 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
ACACB-215ENST00000546328 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
ACACB-215ENST00000546328 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
ACACB-215ENST00000546328 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
ACACB-215ENST00000546328 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
ACACB-215ENST00000546328 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
ACACB-215ENST00000546328 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
ACACB-215ENST00000546328 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
ACACB-215ENST00000546328 WIZO95785 1651 aa14.36□□□□□ -0.11
ACACB-215ENST00000546328 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
ACACB-215ENST00000546328 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
ACACB-215ENST00000546328 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
ACACB-215ENST00000546328 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
ACACB-215ENST00000546328 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
ACACB-215ENST00000546328 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
ACACB-215ENST00000546328 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
ACACB-215ENST00000546328 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
ACACB-215ENST00000546328 WDR62O43379 1518 aa14.17□□□□□ -0.14
ACACB-215ENST00000546328 CEP164Q9UPV0 1460 aa14.08□□□□□ -0.16
ACACB-215ENST00000546328 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
ACACB-215ENST00000546328 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
ACACB-215ENST00000546328 CFTRP13569 1480 aa14.03□□□□□ -0.16
ACACB-215ENST00000546328 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
ACACB-215ENST00000546328 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
ACACB-215ENST00000546328 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
ACACB-215ENST00000546328 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
ACACB-215ENST00000546328 RIMBP3CA6NJZ7 1639 aa13.83□□□□□ -0.2
ACACB-215ENST00000546328 RIMBP3BA6NNM3 1639 aa13.83□□□□□ -0.2
ACACB-215ENST00000546328 RIMBP3Q9UFD9 1639 aa13.83□□□□□ -0.2
ACACB-215ENST00000546328 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
ACACB-215ENST00000546328 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
ACACB-215ENST00000546328 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
ACACB-215ENST00000546328 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
ACACB-215ENST00000546328 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
ACACB-215ENST00000546328 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.21
ACACB-215ENST00000546328 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.22
ACACB-215ENST00000546328 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
ACACB-215ENST00000546328 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
ACACB-215ENST00000546328 CYB5RLQ6IPT4 315 aa13.68□□□□□ -0.22
ACACB-215ENST00000546328 CHD1O14646 1710 aa13.67□□□□□ -0.22
ACACB-215ENST00000546328 POLA1P09884 1462 aaPredicted RBP13.65□□□□□ -0.22
ACACB-215ENST00000546328 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
ACACB-215ENST00000546328 RAD54L2Q9Y4B4 1467 aa13.62□□□□□ -0.23
ACACB-215ENST00000546328 FBLN2P98095 1184 aa13.62□□□□□ -0.23
ACACB-215ENST00000546328 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
ACACB-215ENST00000546328 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
ACACB-215ENST00000546328 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
ACACB-215ENST00000546328 CUX1P39880 1505 aa13.59□□□□□ -0.23
ACACB-215ENST00000546328 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
ACACB-215ENST00000546328 SOGA1O94964 1423 aa13.56□□□□□ -0.24
ACACB-215ENST00000546328 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
ACACB-215ENST00000546328 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
ACACB-215ENST00000546328 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
ACACB-215ENST00000546328 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
ACACB-215ENST00000546328 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
ACACB-215ENST00000546328 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
ACACB-215ENST00000546328 CHMP7Q8WUX9 453 aaPredicted RBP13.47□□□□□ -0.25
ACACB-215ENST00000546328 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
ACACB-215ENST00000546328 WDR97A6NE52 1622 aa13.46□□□□□ -0.26
ACACB-215ENST00000546328 GRIN2BQ13224 1484 aa13.45□□□□□ -0.26
ACACB-215ENST00000546328 SYNJ2O15056 1496 aa13.43□□□□□ -0.26
ACACB-215ENST00000546328 ABCA10Q8WWZ4 1543 aa13.42□□□□□ -0.26
ACACB-215ENST00000546328 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
ACACB-215ENST00000546328 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
ACACB-215ENST00000546328 ABCA5Q8WWZ7 1642 aa13.36□□□□□ -0.27
ACACB-215ENST00000546328 ERCC6L2Q5T890 1561 aa13.36□□□□□ -0.27
ACACB-215ENST00000546328 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
ACACB-215ENST00000546328 EEA1Q15075 1411 aa13.32□□□□□ -0.28
ACACB-215ENST00000546328 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
ACACB-215ENST00000546328 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
ACACB-215ENST00000546328 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
ACACB-215ENST00000546328 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
ACACB-215ENST00000546328 NUP160Q12769 1436 aa13.26□□□□□ -0.29
ACACB-215ENST00000546328 CUL7Q14999 1698 aa13.23□□□□□ -0.29
ACACB-215ENST00000546328 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1218.2 ms