RNA–Protein interactions for RNA: ENST00000546177.1

JRKL-202, Transcript of JRK like, humanhuman

TSL 1 (best)

Gene JRKL, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRKL-202ENST00000546177 NISCHQ9Y2I1 1504 aa45.06■■■■■ 4.8
JRKL-202ENST00000546177 ABCC9O60706 1549 aa41.28■■■■■ 4.2
JRKL-202ENST00000546177 CCDC180Q9P1Z9 1646 aa40.71■■■■■ 4.11
JRKL-202ENST00000546177 DNAJC5BQ9UF47 199 aa39.24■■■■□ 3.87
JRKL-202ENST00000546177 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
JRKL-202ENST00000546177 NACADO15069 1562 aa38.58■■■■□ 3.77
JRKL-202ENST00000546177 PABPN1Q86U42 306 aaKnown RBP eCLIP38.33■■■■□ 3.73
JRKL-202ENST00000546177 UNC13AQ9UPW8 1703 aa38.27■■■■□ 3.72
JRKL-202ENST00000546177 DCAF8L2P0C7V8 631 aa38.24■■■■□ 3.71
JRKL-202ENST00000546177 BICRAQ9NZM4 1560 aa37.97■■■■□ 3.67
JRKL-202ENST00000546177 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.64
JRKL-202ENST00000546177 CC2D2AQ9P2K1 1620 aa37.28■■■■□ 3.56
JRKL-202ENST00000546177 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.56
JRKL-202ENST00000546177 ZCCHC6Q5VYS8 1495 aaKnown RBP37.25■■■■□ 3.55
JRKL-202ENST00000546177 CECR2Q9BXF3 1484 aa37.23■■■■□ 3.55
JRKL-202ENST00000546177 DCAF1Q9Y4B6 1507 aa37.15■■■■□ 3.54
JRKL-202ENST00000546177 SCRIBQ14160 1630 aa37.12■■■■□ 3.53
JRKL-202ENST00000546177 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
JRKL-202ENST00000546177 DNAJC5Q9H3Z4 198 aa36.37■■■■□ 3.41
JRKL-202ENST00000546177 CUX2O14529 1486 aa35.75■■■■□ 3.31
JRKL-202ENST00000546177 ERCC6Q03468 1493 aa35.65■■■■□ 3.3
JRKL-202ENST00000546177 NCAPD3P42695 1498 aa35.6■■■■□ 3.29
JRKL-202ENST00000546177 ATAD2BQ9ULI0 1458 aa35.46■■■■□ 3.27
JRKL-202ENST00000546177 NESP48681 1621 aa35.34■■■■□ 3.25
JRKL-202ENST00000546177 HMGXB3Q12766 1538 aa35.32■■■■□ 3.25
JRKL-202ENST00000546177 SMARCA4P51532 1647 aa35.32■■■■□ 3.25
JRKL-202ENST00000546177 SMARCA2P51531 1590 aa35.3■■■■□ 3.24
JRKL-202ENST00000546177 THOC2Q8NI27 1593 aaKnown RBP35.1■■■■□ 3.21
JRKL-202ENST00000546177 BAZ1BQ9UIG0 1483 aaKnown RBP35.08■■■■□ 3.21
JRKL-202ENST00000546177 BAZ1AQ9NRL2 1556 aaPredicted RBP35■■■■□ 3.19
JRKL-202ENST00000546177 PEG3Q9GZU2 1588 aa34.94■■■■□ 3.18
JRKL-202ENST00000546177 LAMC3Q9Y6N6 1575 aa34.92■■■■□ 3.18
JRKL-202ENST00000546177 KIF21AQ7Z4S6 1674 aa34.9■■■■□ 3.18
JRKL-202ENST00000546177 MROH2BQ7Z745 1585 aa34.76■■■■□ 3.16
JRKL-202ENST00000546177 PDS5BQ9NTI5 1447 aa34.7■■■■□ 3.15
JRKL-202ENST00000546177 TRIM41Q8WV44 630 aa34.59■■■■□ 3.13
JRKL-202ENST00000546177 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
JRKL-202ENST00000546177 MRC2Q9UBG0 1479 aa34.49■■■■□ 3.11
JRKL-202ENST00000546177 WDR62O43379 1518 aa34.45■■■■□ 3.11
JRKL-202ENST00000546177 WIZO95785 1651 aa34.35■■■■□ 3.09
JRKL-202ENST00000546177 CEP164Q9UPV0 1460 aa34.23■■■■□ 3.07
JRKL-202ENST00000546177 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
JRKL-202ENST00000546177 CFTRP13569 1480 aa34.01■■■■□ 3.03
JRKL-202ENST00000546177 OSCARQ8IYS5 282 aa33.97■■■■□ 3.03
JRKL-202ENST00000546177 URB2Q14146 1524 aaKnown RBP33.94■■■■□ 3.02
JRKL-202ENST00000546177 TOP2AP11388 1531 aaKnown RBP33.83■■■■□ 3.01
JRKL-202ENST00000546177 RSF1Q96T23 1441 aaPredicted RBP33.79■■■■□ 3
JRKL-202ENST00000546177 RIMBP3CA6NJZ7 1639 aa33.74■■■□□ 2.99
JRKL-202ENST00000546177 RIMBP3BA6NNM3 1639 aa33.74■■■□□ 2.99
JRKL-202ENST00000546177 RIMBP3Q9UFD9 1639 aa33.74■■■□□ 2.99
JRKL-202ENST00000546177 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
JRKL-202ENST00000546177 ZNF608Q9ULD9 1512 aaPredicted RBP33.63■■■□□ 2.97
JRKL-202ENST00000546177 IFT140Q96RY7 1462 aa33.55■■■□□ 2.96
JRKL-202ENST00000546177 ARHGEF11O15085 1522 aa33.54■■■□□ 2.96
JRKL-202ENST00000546177 TOPBP1Q92547 1522 aa33.45■■■□□ 2.95
JRKL-202ENST00000546177 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
JRKL-202ENST00000546177 EIF4G3O43432 1585 aaKnown RBP33.43■■■□□ 2.94
JRKL-202ENST00000546177 CHD1O14646 1710 aa33.33■■■□□ 2.93
JRKL-202ENST00000546177 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
JRKL-202ENST00000546177 CYB5RLQ6IPT4 315 aa33.27■■■□□ 2.92
JRKL-202ENST00000546177 ABCC8Q09428 1581 aa33.24■■■□□ 2.91
JRKL-202ENST00000546177 TARBP1Q13395 1621 aaKnown RBP33.23■■■□□ 2.91
JRKL-202ENST00000546177 AQRO60306 1485 aaKnown RBP eCLIP33.22■■■□□ 2.91
JRKL-202ENST00000546177 ARAP1Q96P48 1450 aa33.19■■■□□ 2.9
JRKL-202ENST00000546177 POLA1P09884 1462 aaPredicted RBP33.08■■■□□ 2.89
JRKL-202ENST00000546177 TRHP20396 242 aaPredicted RBP33.08■■■□□ 2.89
JRKL-202ENST00000546177 FBLN2P98095 1184 aa33.07■■■□□ 2.88
JRKL-202ENST00000546177 RAD54L2Q9Y4B4 1467 aa32.99■■■□□ 2.87
JRKL-202ENST00000546177 TDRD9Q8NDG6 1382 aaKnown RBP32.91■■■□□ 2.86
JRKL-202ENST00000546177 SNAPC4Q5SXM2 1469 aa32.88■■■□□ 2.85
JRKL-202ENST00000546177 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
JRKL-202ENST00000546177 SOGA1O94964 1423 aa32.86■■■□□ 2.85
JRKL-202ENST00000546177 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
JRKL-202ENST00000546177 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
JRKL-202ENST00000546177 SYNJ1O43426 1573 aa32.76■■■□□ 2.84
JRKL-202ENST00000546177 MAGI1Q96QZ7 1491 aaPredicted RBP32.72■■■□□ 2.83
JRKL-202ENST00000546177 CHMP7Q8WUX9 453 aaPredicted RBP32.7■■■□□ 2.83
JRKL-202ENST00000546177 CUX1P39880 1505 aa32.7■■■□□ 2.83
JRKL-202ENST00000546177 GRIN2BQ13224 1484 aa32.66■■■□□ 2.82
JRKL-202ENST00000546177 SYNJ2O15056 1496 aa32.62■■■□□ 2.81
JRKL-202ENST00000546177 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
JRKL-202ENST00000546177 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
JRKL-202ENST00000546177 AEBP2Q6ZN18 517 aaPredicted RBP32.5■■■□□ 2.79
JRKL-202ENST00000546177 ABCA5Q8WWZ7 1642 aa32.42■■■□□ 2.78
JRKL-202ENST00000546177 ERCC6L2Q5T890 1561 aa32.37■■■□□ 2.77
JRKL-202ENST00000546177 ABCA10Q8WWZ4 1543 aa32.36■■■□□ 2.77
JRKL-202ENST00000546177 GRIN2AQ12879 1464 aa32.27■■■□□ 2.76
JRKL-202ENST00000546177 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
JRKL-202ENST00000546177 CEP170Q5SW79 1584 aa32.23■■■□□ 2.75
JRKL-202ENST00000546177 NUP160Q12769 1436 aa32.17■■■□□ 2.74
JRKL-202ENST00000546177 SHROOM2Q13796 1616 aa32.14■■■□□ 2.74
JRKL-202ENST00000546177 KIF13AQ9H1H9 1805 aa32.08■■■□□ 2.73
JRKL-202ENST00000546177 WRNQ14191 1432 aaPredicted RBP eCLIP32.08■■■□□ 2.73
JRKL-202ENST00000546177 BIVM-ERCC5R4GMW8 1640 aa32.02■■■□□ 2.72
JRKL-202ENST00000546177 FHAD1B1AJZ9 1412 aa32.01■■■□□ 2.72
JRKL-202ENST00000546177 TOP2BQ02880 1626 aa32■■■□□ 2.71
JRKL-202ENST00000546177 ERICH3Q5RHP9 1530 aa31.93■■■□□ 2.7
JRKL-202ENST00000546177 PRG4Q92954 1404 aaPredicted RBP31.9■■■□□ 2.7
JRKL-202ENST00000546177 SUPT5HO00267 1087 aaKnown RBP31.85■■■□□ 2.69
JRKL-202ENST00000546177 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms