RNA–Protein interactions for RNA: ENST00000545162.5

SOD2-214, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-214ENST00000545162 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
SOD2-214ENST00000545162 ABCC9O60706 1549 aa26.06■■□□□ 1.76
SOD2-214ENST00000545162 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
SOD2-214ENST00000545162 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
SOD2-214ENST00000545162 DNAJC5BQ9UF47 199 aa24.6■■□□□ 1.53
SOD2-214ENST00000545162 NACADO15069 1562 aa24.53■■□□□ 1.52
SOD2-214ENST00000545162 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
SOD2-214ENST00000545162 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
SOD2-214ENST00000545162 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
SOD2-214ENST00000545162 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
SOD2-214ENST00000545162 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
SOD2-214ENST00000545162 BICRAQ9NZM4 1560 aa24.02■■□□□ 1.44
SOD2-214ENST00000545162 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
SOD2-214ENST00000545162 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
SOD2-214ENST00000545162 SCRIBQ14160 1630 aa23.6■■□□□ 1.37
SOD2-214ENST00000545162 CC2D2AQ9P2K1 1620 aa23.53■■□□□ 1.36
SOD2-214ENST00000545162 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
SOD2-214ENST00000545162 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
SOD2-214ENST00000545162 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
SOD2-214ENST00000545162 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
SOD2-214ENST00000545162 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
SOD2-214ENST00000545162 CUX2O14529 1486 aa22.52■■□□□ 1.2
SOD2-214ENST00000545162 ERCC6Q03468 1493 aa22.52■■□□□ 1.2
SOD2-214ENST00000545162 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
SOD2-214ENST00000545162 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
SOD2-214ENST00000545162 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
SOD2-214ENST00000545162 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
SOD2-214ENST00000545162 NESP48681 1621 aa22.35■■□□□ 1.17
SOD2-214ENST00000545162 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
SOD2-214ENST00000545162 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
SOD2-214ENST00000545162 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
SOD2-214ENST00000545162 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
SOD2-214ENST00000545162 THOC2Q8NI27 1593 aaKnown RBP22.13■■□□□ 1.13
SOD2-214ENST00000545162 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
SOD2-214ENST00000545162 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
SOD2-214ENST00000545162 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
SOD2-214ENST00000545162 WIZO95785 1651 aa21.97■■□□□ 1.11
SOD2-214ENST00000545162 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
SOD2-214ENST00000545162 MRC2Q9UBG0 1479 aa21.86■■□□□ 1.09
SOD2-214ENST00000545162 WDR62O43379 1518 aa21.8■■□□□ 1.08
SOD2-214ENST00000545162 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
SOD2-214ENST00000545162 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
SOD2-214ENST00000545162 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
SOD2-214ENST00000545162 CFTRP13569 1480 aa21.68■■□□□ 1.06
SOD2-214ENST00000545162 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
SOD2-214ENST00000545162 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
SOD2-214ENST00000545162 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
SOD2-214ENST00000545162 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
SOD2-214ENST00000545162 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
SOD2-214ENST00000545162 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
SOD2-214ENST00000545162 IFT140Q96RY7 1462 aa21.32■■□□□ 1
SOD2-214ENST00000545162 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
SOD2-214ENST00000545162 TOPBP1Q92547 1522 aa21.29■■□□□ 1
SOD2-214ENST00000545162 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
SOD2-214ENST00000545162 RIMBP3CA6NJZ7 1639 aa21.2■□□□□ 0.98
SOD2-214ENST00000545162 RIMBP3BA6NNM3 1639 aa21.2■□□□□ 0.98
SOD2-214ENST00000545162 RIMBP3Q9UFD9 1639 aa21.2■□□□□ 0.98
SOD2-214ENST00000545162 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
SOD2-214ENST00000545162 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
SOD2-214ENST00000545162 ARHGEF11O15085 1522 aa21.12■□□□□ 0.97
SOD2-214ENST00000545162 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
SOD2-214ENST00000545162 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.971e-6■■■■■ 33.2
SOD2-214ENST00000545162 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
SOD2-214ENST00000545162 CHD1O14646 1710 aa21.04■□□□□ 0.96
SOD2-214ENST00000545162 FBLN2P98095 1184 aa21.01■□□□□ 0.95
SOD2-214ENST00000545162 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
SOD2-214ENST00000545162 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
SOD2-214ENST00000545162 SOGA1O94964 1423 aa20.96■□□□□ 0.95
SOD2-214ENST00000545162 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
SOD2-214ENST00000545162 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
SOD2-214ENST00000545162 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
SOD2-214ENST00000545162 CUX1P39880 1505 aa20.87■□□□□ 0.93
SOD2-214ENST00000545162 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
SOD2-214ENST00000545162 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
SOD2-214ENST00000545162 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
SOD2-214ENST00000545162 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
SOD2-214ENST00000545162 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
SOD2-214ENST00000545162 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
SOD2-214ENST00000545162 CLASP1Q7Z460 1538 aa20.79■□□□□ 0.92
SOD2-214ENST00000545162 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
SOD2-214ENST00000545162 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
SOD2-214ENST00000545162 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
SOD2-214ENST00000545162 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
SOD2-214ENST00000545162 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
SOD2-214ENST00000545162 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
SOD2-214ENST00000545162 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
SOD2-214ENST00000545162 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
SOD2-214ENST00000545162 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
SOD2-214ENST00000545162 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
SOD2-214ENST00000545162 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
SOD2-214ENST00000545162 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
SOD2-214ENST00000545162 NUP160Q12769 1436 aa20.46■□□□□ 0.87
SOD2-214ENST00000545162 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
SOD2-214ENST00000545162 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
SOD2-214ENST00000545162 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
SOD2-214ENST00000545162 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
SOD2-214ENST00000545162 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
SOD2-214ENST00000545162 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
SOD2-214ENST00000545162 PRG4Q92954 1404 aaPredicted RBP20.29■□□□□ 0.84
SOD2-214ENST00000545162 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms