RNA–Protein interactions for RNA: ENST00000545035.1

ESRRA-207, Transcript of estrogen related receptor alpha, humanhuman

TSL 2

Gene ESRRA, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-207ENST00000545035 NISCHQ9Y2I1 1504 aa46.59■■■■■ 5.05
ESRRA-207ENST00000545035 ABCC9O60706 1549 aa43.12■■■■■ 4.49
ESRRA-207ENST00000545035 CCDC180Q9P1Z9 1646 aa42.17■■■■■ 4.34
ESRRA-207ENST00000545035 DNAJC5BQ9UF47 199 aa41.17■■■■■ 4.18
ESRRA-207ENST00000545035 RB1CC1Q8TDY2 1594 aa40.58■■■■■ 4.09
ESRRA-207ENST00000545035 NACADO15069 1562 aa40.05■■■■■ 4
ESRRA-207ENST00000545035 PABPN1Q86U42 306 aaKnown RBP eCLIP40.03■■■■■ 4
ESRRA-207ENST00000545035 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
ESRRA-207ENST00000545035 UNC13AQ9UPW8 1703 aa39.74■■■■□ 3.95
ESRRA-207ENST00000545035 BICRAQ9NZM4 1560 aa39.44■■■■□ 3.9
ESRRA-207ENST00000545035 MYO15BQ96JP2 1530 aa39.19■■■■□ 3.86
ESRRA-207ENST00000545035 CECR2Q9BXF3 1484 aa38.87■■■■□ 3.81
ESRRA-207ENST00000545035 CC2D2AQ9P2K1 1620 aa38.87■■■■□ 3.81
ESRRA-207ENST00000545035 SHROOM4Q9ULL8 1493 aa38.78■■■■□ 3.8
ESRRA-207ENST00000545035 EIF4G1Q04637 1599 aaKnown RBP38.54■■■■□ 3.76
ESRRA-207ENST00000545035 SCRIBQ14160 1630 aa38.5■■■■□ 3.75
ESRRA-207ENST00000545035 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
ESRRA-207ENST00000545035 DNAJC5Q9H3Z4 198 aa38.36■■■■□ 3.73
ESRRA-207ENST00000545035 DCAF1Q9Y4B6 1507 aa38.34■■■■□ 3.73
ESRRA-207ENST00000545035 CUX2O14529 1486 aa37.39■■■■□ 3.58
ESRRA-207ENST00000545035 ERCC6Q03468 1493 aa37.27■■■■□ 3.56
ESRRA-207ENST00000545035 NCAPD3P42695 1498 aa36.97■■■■□ 3.51
ESRRA-207ENST00000545035 NESP48681 1621 aa36.8■■■■□ 3.48
ESRRA-207ENST00000545035 ATAD2BQ9ULI0 1458 aa36.78■■■■□ 3.48
ESRRA-207ENST00000545035 HMGXB3Q12766 1538 aa36.64■■■■□ 3.46
ESRRA-207ENST00000545035 SMARCA2P51531 1590 aa36.62■■■■□ 3.45
ESRRA-207ENST00000545035 SMARCA4P51532 1647 aa36.56■■■■□ 3.44
ESRRA-207ENST00000545035 THOC2Q8NI27 1593 aaKnown RBP36.54■■■■□ 3.44
ESRRA-207ENST00000545035 TRIM41Q8WV44 630 aa36.49■■■■□ 3.43
ESRRA-207ENST00000545035 BAZ1BQ9UIG0 1483 aaKnown RBP36.42■■■■□ 3.42
ESRRA-207ENST00000545035 KIF21AQ7Z4S6 1674 aa36.31■■■■□ 3.4
ESRRA-207ENST00000545035 LAMC3Q9Y6N6 1575 aa36.31■■■■□ 3.4
ESRRA-207ENST00000545035 BAZ1AQ9NRL2 1556 aaPredicted RBP36.23■■■■□ 3.39
ESRRA-207ENST00000545035 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
ESRRA-207ENST00000545035 PDS5BQ9NTI5 1447 aa36.12■■■■□ 3.37
ESRRA-207ENST00000545035 MROH2BQ7Z745 1585 aa35.94■■■■□ 3.34
ESRRA-207ENST00000545035 MRC2Q9UBG0 1479 aa35.89■■■■□ 3.34
ESRRA-207ENST00000545035 CADPSQ9ULU8 1353 aa35.84■■■■□ 3.33
ESRRA-207ENST00000545035 WDR62O43379 1518 aa35.82■■■■□ 3.32
ESRRA-207ENST00000545035 CEP164Q9UPV0 1460 aa35.6■■■■□ 3.29
ESRRA-207ENST00000545035 OSCARQ8IYS5 282 aa35.59■■■■□ 3.29
ESRRA-207ENST00000545035 WIZO95785 1651 aa35.52■■■■□ 3.28
ESRRA-207ENST00000545035 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
ESRRA-207ENST00000545035 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
ESRRA-207ENST00000545035 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
ESRRA-207ENST00000545035 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
ESRRA-207ENST00000545035 URB2Q14146 1524 aaKnown RBP35.25■■■■□ 3.23
ESRRA-207ENST00000545035 CFTRP13569 1480 aa35.23■■■■□ 3.23
ESRRA-207ENST00000545035 ARHGEF11O15085 1522 aa35.04■■■■□ 3.2
ESRRA-207ENST00000545035 ZNF608Q9ULD9 1512 aaPredicted RBP34.97■■■■□ 3.19
ESRRA-207ENST00000545035 TOP2AP11388 1531 aaKnown RBP34.94■■■■□ 3.18
ESRRA-207ENST00000545035 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
ESRRA-207ENST00000545035 CYB5RLQ6IPT4 315 aa34.88■■■■□ 3.17
ESRRA-207ENST00000545035 IFT140Q96RY7 1462 aa34.88■■■■□ 3.17
ESRRA-207ENST00000545035 RSF1Q96T23 1441 aaPredicted RBP34.85■■■■□ 3.17
ESRRA-207ENST00000545035 TRHP20396 242 aaPredicted RBP34.82■■■■□ 3.16
ESRRA-207ENST00000545035 EIF4G3O43432 1585 aaKnown RBP34.74■■■■□ 3.15
ESRRA-207ENST00000545035 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
ESRRA-207ENST00000545035 CHD1O14646 1710 aa34.69■■■■□ 3.14
ESRRA-207ENST00000545035 ARAP1Q96P48 1450 aa34.65■■■■□ 3.14
ESRRA-207ENST00000545035 FBLN2P98095 1184 aa34.57■■■■□ 3.12
ESRRA-207ENST00000545035 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
ESRRA-207ENST00000545035 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.12
ESRRA-207ENST00000545035 ABCC8Q09428 1581 aa34.5■■■■□ 3.11
ESRRA-207ENST00000545035 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
ESRRA-207ENST00000545035 TARBP1Q13395 1621 aaKnown RBP34.45■■■■□ 3.11
ESRRA-207ENST00000545035 AEBP2Q6ZN18 517 aaPredicted RBP34.42■■■■□ 3.1
ESRRA-207ENST00000545035 POLA1P09884 1462 aaPredicted RBP34.29■■■■□ 3.08
ESRRA-207ENST00000545035 RAD54L2Q9Y4B4 1467 aa34.25■■■■□ 3.07
ESRRA-207ENST00000545035 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
ESRRA-207ENST00000545035 SNAPC4Q5SXM2 1469 aa34.18■■■■□ 3.06
ESRRA-207ENST00000545035 CLASP1Q7Z460 1538 aa34.18■■■■□ 3.06
ESRRA-207ENST00000545035 SOGA1O94964 1423 aa34.13■■■■□ 3.05
ESRRA-207ENST00000545035 SYNJ1O43426 1573 aa34.11■■■■□ 3.05
ESRRA-207ENST00000545035 CHMP7Q8WUX9 453 aaPredicted RBP34.1■■■■□ 3.05
ESRRA-207ENST00000545035 FGD5Q6ZNL6 1462 aa33.99■■■■□ 3.03
ESRRA-207ENST00000545035 WDR97A6NE52 1622 aa33.98■■■■□ 3.03
ESRRA-207ENST00000545035 MAGI1Q96QZ7 1491 aaPredicted RBP33.97■■■■□ 3.03
ESRRA-207ENST00000545035 GRIN2BQ13224 1484 aa33.91■■■■□ 3.02
ESRRA-207ENST00000545035 GAPVD1Q14C86 1478 aa33.9■■■■□ 3.02
ESRRA-207ENST00000545035 SYNJ2O15056 1496 aa33.89■■■■□ 3.02
ESRRA-207ENST00000545035 CUX1P39880 1505 aa33.81■■■■□ 3
ESRRA-207ENST00000545035 PBRM1Q86U86 1689 aa33.8■■■■□ 3
ESRRA-207ENST00000545035 ERCC6L2Q5T890 1561 aa33.67■■■□□ 2.98
ESRRA-207ENST00000545035 ABCA5Q8WWZ7 1642 aa33.55■■■□□ 2.96
ESRRA-207ENST00000545035 ABCA10Q8WWZ4 1543 aa33.49■■■□□ 2.95
ESRRA-207ENST00000545035 CEP170Q5SW79 1584 aa33.49■■■□□ 2.95
ESRRA-207ENST00000545035 GRIN2AQ12879 1464 aa33.49■■■□□ 2.95
ESRRA-207ENST00000545035 KIF13AQ9H1H9 1805 aa33.44■■■□□ 2.94
ESRRA-207ENST00000545035 ADAMTS12P58397 1594 aa33.38■■■□□ 2.93
ESRRA-207ENST00000545035 NUP160Q12769 1436 aa33.36■■■□□ 2.93
ESRRA-207ENST00000545035 SHROOM2Q13796 1616 aa33.34■■■□□ 2.93
ESRRA-207ENST00000545035 FHAD1B1AJZ9 1412 aa33.21■■■□□ 2.91
ESRRA-207ENST00000545035 WRNQ14191 1432 aaPredicted RBP eCLIP33.2■■■□□ 2.91
ESRRA-207ENST00000545035 PRG4Q92954 1404 aaPredicted RBP33.19■■■□□ 2.9
ESRRA-207ENST00000545035 FAM69CQ0P6D2 419 aa33.17■■■□□ 2.9
ESRRA-207ENST00000545035 ABCC10Q5T3U5 1492 aa33.09■■■□□ 2.89
ESRRA-207ENST00000545035 JPH4Q96JJ6 628 aa33.07■■■□□ 2.88
ESRRA-207ENST00000545035 NPM1P06748 294 aaKnown RBP eCLIP33.05■■■□□ 2.88
ESRRA-207ENST00000545035 ERICH3Q5RHP9 1530 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms