RNA–Protein interactions for RNA: ENST00000545022.5

KDM2B-218, Transcript of lysine demethylase 2B, humanhuman

TSL 4

Gene KDM2B, Length 544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-218ENST00000545022 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
KDM2B-218ENST00000545022 CCDC180Q9P1Z9 1646 aa14.45□□□□□ -0.1
KDM2B-218ENST00000545022 ABCC9O60706 1549 aa14.33□□□□□ -0.12
KDM2B-218ENST00000545022 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.22
KDM2B-218ENST00000545022 NACADO15069 1562 aa13.63□□□□□ -0.23
KDM2B-218ENST00000545022 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
KDM2B-218ENST00000545022 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
KDM2B-218ENST00000545022 ZCCHC6Q5VYS8 1495 aaKnown RBP13.41□□□□□ -0.26
KDM2B-218ENST00000545022 DCAF1Q9Y4B6 1507 aa13.35□□□□□ -0.27
KDM2B-218ENST00000545022 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
KDM2B-218ENST00000545022 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
KDM2B-218ENST00000545022 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
KDM2B-218ENST00000545022 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
KDM2B-218ENST00000545022 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
KDM2B-218ENST00000545022 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
KDM2B-218ENST00000545022 EIF4G1Q04637 1599 aaKnown RBP12.96□□□□□ -0.33
KDM2B-218ENST00000545022 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
KDM2B-218ENST00000545022 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
KDM2B-218ENST00000545022 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
KDM2B-218ENST00000545022 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
KDM2B-218ENST00000545022 SMARCA4P51532 1647 aa12.57□□□□□ -0.4
KDM2B-218ENST00000545022 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
KDM2B-218ENST00000545022 SMARCA2P51531 1590 aa12.54□□□□□ -0.4
KDM2B-218ENST00000545022 BAZ1AQ9NRL2 1556 aaPredicted RBP12.53□□□□□ -0.4
KDM2B-218ENST00000545022 HMGXB3Q12766 1538 aa12.52□□□□□ -0.41
KDM2B-218ENST00000545022 PEG3Q9GZU2 1588 aa12.46□□□□□ -0.42
KDM2B-218ENST00000545022 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
KDM2B-218ENST00000545022 MROH2BQ7Z745 1585 aa12.42□□□□□ -0.42
KDM2B-218ENST00000545022 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
KDM2B-218ENST00000545022 CUX2O14529 1486 aa12.34□□□□□ -0.43
KDM2B-218ENST00000545022 NESP48681 1621 aa12.33□□□□□ -0.44
KDM2B-218ENST00000545022 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
KDM2B-218ENST00000545022 WIZO95785 1651 aa12.26□□□□□ -0.45
KDM2B-218ENST00000545022 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
KDM2B-218ENST00000545022 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.45
KDM2B-218ENST00000545022 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
KDM2B-218ENST00000545022 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
KDM2B-218ENST00000545022 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
KDM2B-218ENST00000545022 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
KDM2B-218ENST00000545022 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
KDM2B-218ENST00000545022 CFTRP13569 1480 aa12.08□□□□□ -0.47
KDM2B-218ENST00000545022 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.47
KDM2B-218ENST00000545022 WDR62O43379 1518 aa12.07□□□□□ -0.48
KDM2B-218ENST00000545022 FANCD2Q9BXW9 1451 aa12.07□□□□□ -0.48
KDM2B-218ENST00000545022 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
KDM2B-218ENST00000545022 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
KDM2B-218ENST00000545022 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
KDM2B-218ENST00000545022 TOPBP1Q92547 1522 aa11.85□□□□□ -0.51
KDM2B-218ENST00000545022 ABCC8Q09428 1581 aa11.84□□□□□ -0.51
KDM2B-218ENST00000545022 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
KDM2B-218ENST00000545022 DNMBPQ6XZF7 1577 aa11.82□□□□□ -0.52
KDM2B-218ENST00000545022 ZNF608Q9ULD9 1512 aaPredicted RBP11.77□□□□□ -0.52
KDM2B-218ENST00000545022 OSCARQ8IYS5 282 aa11.75□□□□□ -0.53
KDM2B-218ENST00000545022 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
KDM2B-218ENST00000545022 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
KDM2B-218ENST00000545022 TARBP1Q13395 1621 aaKnown RBP11.73□□□□□ -0.53
KDM2B-218ENST00000545022 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
KDM2B-218ENST00000545022 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
KDM2B-218ENST00000545022 AQRO60306 1485 aaKnown RBP eCLIP11.68□□□□□ -0.54
KDM2B-218ENST00000545022 CUX1P39880 1505 aa11.67□□□□□ -0.54
KDM2B-218ENST00000545022 FGD5Q6ZNL6 1462 aa11.67□□□□□ -0.54
KDM2B-218ENST00000545022 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
KDM2B-218ENST00000545022 SOGA1O94964 1423 aa11.67□□□□□ -0.54
KDM2B-218ENST00000545022 WDR97A6NE52 1622 aa11.65□□□□□ -0.54
KDM2B-218ENST00000545022 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
KDM2B-218ENST00000545022 CHD1O14646 1710 aa11.61□□□□□ -0.55
KDM2B-218ENST00000545022 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
KDM2B-218ENST00000545022 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
KDM2B-218ENST00000545022 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
KDM2B-218ENST00000545022 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
KDM2B-218ENST00000545022 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
KDM2B-218ENST00000545022 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
KDM2B-218ENST00000545022 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
KDM2B-218ENST00000545022 FBLN2P98095 1184 aa11.57□□□□□ -0.56
KDM2B-218ENST00000545022 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
KDM2B-218ENST00000545022 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
KDM2B-218ENST00000545022 ABCA5Q8WWZ7 1642 aa11.53□□□□□ -0.56
KDM2B-218ENST00000545022 PBRM1Q86U86 1689 aa11.52□□□□□ -0.56
KDM2B-218ENST00000545022 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.56
KDM2B-218ENST00000545022 SYNJ2O15056 1496 aa11.52□□□□□ -0.56
KDM2B-218ENST00000545022 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.57
KDM2B-218ENST00000545022 TOP2BQ02880 1626 aa11.52□□□□□ -0.57
KDM2B-218ENST00000545022 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
KDM2B-218ENST00000545022 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
KDM2B-218ENST00000545022 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
KDM2B-218ENST00000545022 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
KDM2B-218ENST00000545022 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.57
KDM2B-218ENST00000545022 ADAMTS12P58397 1594 aa11.45□□□□□ -0.58
KDM2B-218ENST00000545022 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
KDM2B-218ENST00000545022 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
KDM2B-218ENST00000545022 FHAD1B1AJZ9 1412 aa11.41□□□□□ -0.58
KDM2B-218ENST00000545022 NUP160Q12769 1436 aa11.38□□□□□ -0.59
KDM2B-218ENST00000545022 CEP170Q5SW79 1584 aa11.37□□□□□ -0.59
KDM2B-218ENST00000545022 SHROOM2Q13796 1616 aa11.31□□□□□ -0.6
KDM2B-218ENST00000545022 ERCC6L2Q5T890 1561 aa11.3□□□□□ -0.6
KDM2B-218ENST00000545022 KIF27Q86VH2 1401 aa11.3□□□□□ -0.6
KDM2B-218ENST00000545022 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
KDM2B-218ENST00000545022 RUSC2Q8N2Y8 1516 aa11.28□□□□□ -0.6
KDM2B-218ENST00000545022 CUL7Q14999 1698 aa11.27□□□□□ -0.6
KDM2B-218ENST00000545022 IGF1RP08069 1367 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms