RNA–Protein interactions for RNA: ENST00000544905.1

BCKDHA-207, Transcript of branched chain keto acid dehydrogenase E1, alpha polypeptide, humanhuman

TSL 2

Gene BCKDHA, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHA-207ENST00000544905 NISCHQ9Y2I1 1504 aa24.47■■□□□ 1.51
BCKDHA-207ENST00000544905 ABCC9O60706 1549 aa22.63■■□□□ 1.21
BCKDHA-207ENST00000544905 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
BCKDHA-207ENST00000544905 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
BCKDHA-207ENST00000544905 RB1CC1Q8TDY2 1594 aa21.34■■□□□ 1.01
BCKDHA-207ENST00000544905 NACADO15069 1562 aa21.1■□□□□ 0.97
BCKDHA-207ENST00000544905 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.96
BCKDHA-207ENST00000544905 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
BCKDHA-207ENST00000544905 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
BCKDHA-207ENST00000544905 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
BCKDHA-207ENST00000544905 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.9
BCKDHA-207ENST00000544905 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
BCKDHA-207ENST00000544905 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
BCKDHA-207ENST00000544905 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
BCKDHA-207ENST00000544905 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
BCKDHA-207ENST00000544905 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
BCKDHA-207ENST00000544905 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
BCKDHA-207ENST00000544905 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
BCKDHA-207ENST00000544905 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
BCKDHA-207ENST00000544905 CUX2O14529 1486 aa19.74■□□□□ 0.75
BCKDHA-207ENST00000544905 ERCC6Q03468 1493 aa19.65■□□□□ 0.74
BCKDHA-207ENST00000544905 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
BCKDHA-207ENST00000544905 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
BCKDHA-207ENST00000544905 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
BCKDHA-207ENST00000544905 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
BCKDHA-207ENST00000544905 NESP48681 1621 aa19.27■□□□□ 0.68
BCKDHA-207ENST00000544905 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
BCKDHA-207ENST00000544905 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
BCKDHA-207ENST00000544905 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
BCKDHA-207ENST00000544905 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
BCKDHA-207ENST00000544905 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
BCKDHA-207ENST00000544905 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
BCKDHA-207ENST00000544905 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
BCKDHA-207ENST00000544905 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
BCKDHA-207ENST00000544905 KIF21AQ7Z4S6 1674 aa18.93■□□□□ 0.62
BCKDHA-207ENST00000544905 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
BCKDHA-207ENST00000544905 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
BCKDHA-207ENST00000544905 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
BCKDHA-207ENST00000544905 WDR62O43379 1518 aa18.83■□□□□ 0.6
BCKDHA-207ENST00000544905 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
BCKDHA-207ENST00000544905 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
BCKDHA-207ENST00000544905 FANCD2Q9BXW9 1451 aa18.66■□□□□ 0.58
BCKDHA-207ENST00000544905 CFTRP13569 1480 aa18.56■□□□□ 0.56
BCKDHA-207ENST00000544905 WIZO95785 1651 aa18.54■□□□□ 0.56
BCKDHA-207ENST00000544905 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
BCKDHA-207ENST00000544905 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
BCKDHA-207ENST00000544905 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
BCKDHA-207ENST00000544905 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
BCKDHA-207ENST00000544905 ARHGEF11O15085 1522 aa18.43■□□□□ 0.54
BCKDHA-207ENST00000544905 CYB5RLQ6IPT4 315 aa18.41■□□□□ 0.54
BCKDHA-207ENST00000544905 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
BCKDHA-207ENST00000544905 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
BCKDHA-207ENST00000544905 ZNF608Q9ULD9 1512 aaPredicted RBP18.34■□□□□ 0.53
BCKDHA-207ENST00000544905 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
BCKDHA-207ENST00000544905 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
BCKDHA-207ENST00000544905 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
BCKDHA-207ENST00000544905 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
BCKDHA-207ENST00000544905 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
BCKDHA-207ENST00000544905 FBLN2P98095 1184 aa18.23■□□□□ 0.51
BCKDHA-207ENST00000544905 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
BCKDHA-207ENST00000544905 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
BCKDHA-207ENST00000544905 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
BCKDHA-207ENST00000544905 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■■■■■ 34.2
BCKDHA-207ENST00000544905 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
BCKDHA-207ENST00000544905 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
BCKDHA-207ENST00000544905 CHD1O14646 1710 aa18.09■□□□□ 0.49
BCKDHA-207ENST00000544905 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
BCKDHA-207ENST00000544905 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
BCKDHA-207ENST00000544905 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
BCKDHA-207ENST00000544905 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
BCKDHA-207ENST00000544905 SOGA1O94964 1423 aa17.98■□□□□ 0.47
BCKDHA-207ENST00000544905 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
BCKDHA-207ENST00000544905 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
BCKDHA-207ENST00000544905 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
BCKDHA-207ENST00000544905 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
BCKDHA-207ENST00000544905 MAGI1Q96QZ7 1491 aaPredicted RBP17.91■□□□□ 0.46
BCKDHA-207ENST00000544905 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
BCKDHA-207ENST00000544905 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
BCKDHA-207ENST00000544905 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
BCKDHA-207ENST00000544905 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
BCKDHA-207ENST00000544905 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
BCKDHA-207ENST00000544905 CUX1P39880 1505 aa17.72■□□□□ 0.43
BCKDHA-207ENST00000544905 PBRM1Q86U86 1689 aa17.63■□□□□ 0.41
BCKDHA-207ENST00000544905 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
BCKDHA-207ENST00000544905 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
BCKDHA-207ENST00000544905 ERCC6L2Q5T890 1561 aa17.58■□□□□ 0.41
BCKDHA-207ENST00000544905 NUP160Q12769 1436 aa17.57■□□□□ 0.4
BCKDHA-207ENST00000544905 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
BCKDHA-207ENST00000544905 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
BCKDHA-207ENST00000544905 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
BCKDHA-207ENST00000544905 FAM69CQ0P6D2 419 aa17.52■□□□□ 0.4
BCKDHA-207ENST00000544905 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.4
BCKDHA-207ENST00000544905 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
BCKDHA-207ENST00000544905 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
BCKDHA-207ENST00000544905 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
BCKDHA-207ENST00000544905 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
BCKDHA-207ENST00000544905 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
BCKDHA-207ENST00000544905 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
BCKDHA-207ENST00000544905 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
BCKDHA-207ENST00000544905 KDM4FA0A1W2PPD8 638 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms