RNA–Protein interactions for RNA: ENST00000544804.5

TSG101-209, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-209ENST00000544804 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
TSG101-209ENST00000544804 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
TSG101-209ENST00000544804 ABCC9O60706 1549 aa33.48■■■□□ 2.95
TSG101-209ENST00000544804 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
TSG101-209ENST00000544804 NACADO15069 1562 aa31.9■■■□□ 2.7
TSG101-209ENST00000544804 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
TSG101-209ENST00000544804 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
TSG101-209ENST00000544804 DCAF8L2P0C7V8 631 aa31.47■■■□□ 2.63
TSG101-209ENST00000544804 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
TSG101-209ENST00000544804 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
TSG101-209ENST00000544804 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
TSG101-209ENST00000544804 PABPN1Q86U42 306 aaKnown RBP eCLIP31.07■■■□□ 2.56
TSG101-209ENST00000544804 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
TSG101-209ENST00000544804 SCRIBQ14160 1630 aa30.88■■■□□ 2.53
TSG101-209ENST00000544804 SHROOM4Q9ULL8 1493 aa30.74■■■□□ 2.51
TSG101-209ENST00000544804 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
TSG101-209ENST00000544804 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
TSG101-209ENST00000544804 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
TSG101-209ENST00000544804 SMARCA4P51532 1647 aa29.51■■■□□ 2.31
TSG101-209ENST00000544804 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
TSG101-209ENST00000544804 ATAD2BQ9ULI0 1458 aa29.34■■■□□ 2.29
TSG101-209ENST00000544804 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
TSG101-209ENST00000544804 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
TSG101-209ENST00000544804 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
TSG101-209ENST00000544804 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
TSG101-209ENST00000544804 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
TSG101-209ENST00000544804 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
TSG101-209ENST00000544804 DNAJC5Q9H3Z4 198 aa28.95■■■□□ 2.22
TSG101-209ENST00000544804 NESP48681 1621 aa28.87■■■□□ 2.21
TSG101-209ENST00000544804 WIZO95785 1651 aa28.86■■■□□ 2.21
TSG101-209ENST00000544804 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
TSG101-209ENST00000544804 CUX2O14529 1486 aa28.77■■■□□ 2.2
TSG101-209ENST00000544804 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
TSG101-209ENST00000544804 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
TSG101-209ENST00000544804 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
TSG101-209ENST00000544804 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
TSG101-209ENST00000544804 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
TSG101-209ENST00000544804 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
TSG101-209ENST00000544804 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
TSG101-209ENST00000544804 PRDM2Q13029 1718 aa28.32■■■□□ 2.12
TSG101-209ENST00000544804 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
TSG101-209ENST00000544804 WDR62O43379 1518 aa28.27■■■□□ 2.12
TSG101-209ENST00000544804 CFTRP13569 1480 aa28.24■■■□□ 2.11
TSG101-209ENST00000544804 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
TSG101-209ENST00000544804 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
TSG101-209ENST00000544804 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
TSG101-209ENST00000544804 URB2Q14146 1524 aaKnown RBP27.98■■■□□ 2.07
TSG101-209ENST00000544804 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
TSG101-209ENST00000544804 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
TSG101-209ENST00000544804 IFT140Q96RY7 1462 aa27.61■■■□□ 2.01
TSG101-209ENST00000544804 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
TSG101-209ENST00000544804 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
TSG101-209ENST00000544804 EIF4G3O43432 1585 aaKnown RBP27.56■■■□□ 2
TSG101-209ENST00000544804 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
TSG101-209ENST00000544804 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
TSG101-209ENST00000544804 CHD1O14646 1710 aa27.38■■□□□ 1.97
TSG101-209ENST00000544804 CUX1P39880 1505 aa27.36■■□□□ 1.97
TSG101-209ENST00000544804 WDR97A6NE52 1622 aa27.33■■□□□ 1.97
TSG101-209ENST00000544804 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
TSG101-209ENST00000544804 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
TSG101-209ENST00000544804 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
TSG101-209ENST00000544804 RAD54L2Q9Y4B4 1467 aa27.3■■□□□ 1.96
TSG101-209ENST00000544804 OSCARQ8IYS5 282 aa27.29■■□□□ 1.96
TSG101-209ENST00000544804 AQRO60306 1485 aaKnown RBP eCLIP27.28■■□□□ 1.96
TSG101-209ENST00000544804 RIMBP3CA6NJZ7 1639 aa27.21■■□□□ 1.95
TSG101-209ENST00000544804 RIMBP3BA6NNM3 1639 aa27.21■■□□□ 1.95
TSG101-209ENST00000544804 RIMBP3Q9UFD9 1639 aa27.21■■□□□ 1.95
TSG101-209ENST00000544804 SOGA1O94964 1423 aa27.21■■□□□ 1.95
TSG101-209ENST00000544804 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
TSG101-209ENST00000544804 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
TSG101-209ENST00000544804 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
TSG101-209ENST00000544804 SNAPC4Q5SXM2 1469 aa27.09■■□□□ 1.93
TSG101-209ENST00000544804 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
TSG101-209ENST00000544804 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
TSG101-209ENST00000544804 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
TSG101-209ENST00000544804 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
TSG101-209ENST00000544804 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
TSG101-209ENST00000544804 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
TSG101-209ENST00000544804 GRIN2BQ13224 1484 aa27.01■■□□□ 1.91
TSG101-209ENST00000544804 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
TSG101-209ENST00000544804 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.91
TSG101-209ENST00000544804 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.97e-7■■■■■ 52.5
TSG101-209ENST00000544804 FBLN2P98095 1184 aa26.91■■□□□ 1.9
TSG101-209ENST00000544804 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
TSG101-209ENST00000544804 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
TSG101-209ENST00000544804 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
TSG101-209ENST00000544804 CHMP7Q8WUX9 453 aaPredicted RBP26.77■■□□□ 1.88
TSG101-209ENST00000544804 GRIN2AQ12879 1464 aa26.71■■□□□ 1.87
TSG101-209ENST00000544804 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
TSG101-209ENST00000544804 CEP170Q5SW79 1584 aa26.67■■□□□ 1.86
TSG101-209ENST00000544804 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.86
TSG101-209ENST00000544804 FHAD1B1AJZ9 1412 aa26.6■■□□□ 1.85
TSG101-209ENST00000544804 NUP160Q12769 1436 aa26.6■■□□□ 1.85
TSG101-209ENST00000544804 SHROOM2Q13796 1616 aa26.58■■□□□ 1.85
TSG101-209ENST00000544804 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
TSG101-209ENST00000544804 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
TSG101-209ENST00000544804 CUL7Q14999 1698 aa26.46■■□□□ 1.83
TSG101-209ENST00000544804 KIF27Q86VH2 1401 aa26.36■■□□□ 1.81
TSG101-209ENST00000544804 IGF1RP08069 1367 aa26.27■■□□□ 1.8
TSG101-209ENST00000544804 PRG4Q92954 1404 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms