RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
CDK2AP1-206ENST00000544658 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
CDK2AP1-206ENST00000544658 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
CDK2AP1-206ENST00000544658 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
CDK2AP1-206ENST00000544658 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
CDK2AP1-206ENST00000544658 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
CDK2AP1-206ENST00000544658 FOXD1Q16676 465 aa19.41■□□□□ 0.7
CDK2AP1-206ENST00000544658 ABCC9O60706 1549 aa19.25■□□□□ 0.67
CDK2AP1-206ENST00000544658 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
CDK2AP1-206ENST00000544658 DCAF8L2P0C7V8 631 aa18.76■□□□□ 0.59
CDK2AP1-206ENST00000544658 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
CDK2AP1-206ENST00000544658 NACADO15069 1562 aa18.58■□□□□ 0.56
CDK2AP1-206ENST00000544658 MYO15BQ96JP2 1530 aa18.53■□□□□ 0.56
CDK2AP1-206ENST00000544658 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
CDK2AP1-206ENST00000544658 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
CDK2AP1-206ENST00000544658 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
CDK2AP1-206ENST00000544658 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
CDK2AP1-206ENST00000544658 MSH5O43196 834 aa18.21■□□□□ 0.51
CDK2AP1-206ENST00000544658 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
CDK2AP1-206ENST00000544658 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
CDK2AP1-206ENST00000544658 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
CDK2AP1-206ENST00000544658 PABPN1Q86U42 306 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDK2AP1-206ENST00000544658 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
CDK2AP1-206ENST00000544658 PPP6R1Q9UPN7 881 aa17.93■□□□□ 0.46
CDK2AP1-206ENST00000544658 ADRA2BP18089 450 aa17.8■□□□□ 0.44
CDK2AP1-206ENST00000544658 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
CDK2AP1-206ENST00000544658 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
CDK2AP1-206ENST00000544658 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
CDK2AP1-206ENST00000544658 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
CDK2AP1-206ENST00000544658 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
CDK2AP1-206ENST00000544658 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
CDK2AP1-206ENST00000544658 BAZ1AQ9NRL2 1556 aaPredicted RBP17.39■□□□□ 0.37
CDK2AP1-206ENST00000544658 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
CDK2AP1-206ENST00000544658 WIZO95785 1651 aa17.29■□□□□ 0.36
CDK2AP1-206ENST00000544658 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
CDK2AP1-206ENST00000544658 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
CDK2AP1-206ENST00000544658 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
CDK2AP1-206ENST00000544658 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
CDK2AP1-206ENST00000544658 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
CDK2AP1-206ENST00000544658 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
CDK2AP1-206ENST00000544658 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
CDK2AP1-206ENST00000544658 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
CDK2AP1-206ENST00000544658 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
CDK2AP1-206ENST00000544658 NESP48681 1621 aa16.81■□□□□ 0.28
CDK2AP1-206ENST00000544658 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
CDK2AP1-206ENST00000544658 CFTRP13569 1480 aa16.67■□□□□ 0.26
CDK2AP1-206ENST00000544658 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
CDK2AP1-206ENST00000544658 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
CDK2AP1-206ENST00000544658 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
CDK2AP1-206ENST00000544658 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
CDK2AP1-206ENST00000544658 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
CDK2AP1-206ENST00000544658 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
CDK2AP1-206ENST00000544658 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
CDK2AP1-206ENST00000544658 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
CDK2AP1-206ENST00000544658 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
CDK2AP1-206ENST00000544658 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
CDK2AP1-206ENST00000544658 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
CDK2AP1-206ENST00000544658 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
CDK2AP1-206ENST00000544658 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
CDK2AP1-206ENST00000544658 CUX1P39880 1505 aa16.35■□□□□ 0.21
CDK2AP1-206ENST00000544658 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
CDK2AP1-206ENST00000544658 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
CDK2AP1-206ENST00000544658 WDR62O43379 1518 aa16.31■□□□□ 0.2
CDK2AP1-206ENST00000544658 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
CDK2AP1-206ENST00000544658 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
CDK2AP1-206ENST00000544658 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
CDK2AP1-206ENST00000544658 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
CDK2AP1-206ENST00000544658 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
CDK2AP1-206ENST00000544658 CUX2O14529 1486 aa16.22■□□□□ 0.19
CDK2AP1-206ENST00000544658 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
CDK2AP1-206ENST00000544658 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
CDK2AP1-206ENST00000544658 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
CDK2AP1-206ENST00000544658 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
CDK2AP1-206ENST00000544658 SOGA1O94964 1423 aa16.11■□□□□ 0.17
CDK2AP1-206ENST00000544658 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
CDK2AP1-206ENST00000544658 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
CDK2AP1-206ENST00000544658 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
CDK2AP1-206ENST00000544658 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
CDK2AP1-206ENST00000544658 TDRD9Q8NDG6 1382 aaKnown RBP16.04■□□□□ 0.16
CDK2AP1-206ENST00000544658 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDK2AP1-206ENST00000544658 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
CDK2AP1-206ENST00000544658 ABCA10Q8WWZ4 1543 aa16.02■□□□□ 0.15
CDK2AP1-206ENST00000544658 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
CDK2AP1-206ENST00000544658 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
CDK2AP1-206ENST00000544658 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
CDK2AP1-206ENST00000544658 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
CDK2AP1-206ENST00000544658 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
CDK2AP1-206ENST00000544658 PBRM1Q86U86 1689 aa15.9■□□□□ 0.14
CDK2AP1-206ENST00000544658 FAM9AQ8IZU1 332 aaPredicted RBP15.88■□□□□ 0.13
CDK2AP1-206ENST00000544658 KIF27Q86VH2 1401 aa15.87■□□□□ 0.13
CDK2AP1-206ENST00000544658 IGF1RP08069 1367 aa15.87■□□□□ 0.13
CDK2AP1-206ENST00000544658 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
CDK2AP1-206ENST00000544658 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
CDK2AP1-206ENST00000544658 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
CDK2AP1-206ENST00000544658 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
CDK2AP1-206ENST00000544658 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
CDK2AP1-206ENST00000544658 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
CDK2AP1-206ENST00000544658 CHD1O14646 1710 aa15.77■□□□□ 0.11
CDK2AP1-206ENST00000544658 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
CDK2AP1-206ENST00000544658 MAGI1Q96QZ7 1491 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms