RNA–Protein interactions for RNA: ENST00000544515.1

AC087863.1-201, humanhuman

TSL 4 BASIC

Gene AC087863.1, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087863.1-201ENST00000544515 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
AC087863.1-201ENST00000544515 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
AC087863.1-201ENST00000544515 ABCC9O60706 1549 aa20.04■□□□□ 0.8
AC087863.1-201ENST00000544515 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
AC087863.1-201ENST00000544515 NACADO15069 1562 aa19.1■□□□□ 0.65
AC087863.1-201ENST00000544515 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
AC087863.1-201ENST00000544515 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
AC087863.1-201ENST00000544515 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
AC087863.1-201ENST00000544515 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
AC087863.1-201ENST00000544515 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
AC087863.1-201ENST00000544515 ZCCHC6Q5VYS8 1495 aaKnown RBP18.56■□□□□ 0.56
AC087863.1-201ENST00000544515 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
AC087863.1-201ENST00000544515 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
AC087863.1-201ENST00000544515 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
AC087863.1-201ENST00000544515 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
AC087863.1-201ENST00000544515 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.5
AC087863.1-201ENST00000544515 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
AC087863.1-201ENST00000544515 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
AC087863.1-201ENST00000544515 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
AC087863.1-201ENST00000544515 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
AC087863.1-201ENST00000544515 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
AC087863.1-201ENST00000544515 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
AC087863.1-201ENST00000544515 CUX2O14529 1486 aa17.46■□□□□ 0.39
AC087863.1-201ENST00000544515 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
AC087863.1-201ENST00000544515 DNAJC5Q9H3Z4 198 aa17.43■□□□□ 0.38
AC087863.1-201ENST00000544515 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
AC087863.1-201ENST00000544515 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
AC087863.1-201ENST00000544515 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
AC087863.1-201ENST00000544515 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
AC087863.1-201ENST00000544515 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
AC087863.1-201ENST00000544515 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
AC087863.1-201ENST00000544515 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
AC087863.1-201ENST00000544515 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
AC087863.1-201ENST00000544515 NESP48681 1621 aa17.15■□□□□ 0.34
AC087863.1-201ENST00000544515 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
AC087863.1-201ENST00000544515 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
AC087863.1-201ENST00000544515 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
AC087863.1-201ENST00000544515 WIZO95785 1651 aa16.91■□□□□ 0.3
AC087863.1-201ENST00000544515 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
AC087863.1-201ENST00000544515 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
AC087863.1-201ENST00000544515 WDR62O43379 1518 aa16.89■□□□□ 0.29
AC087863.1-201ENST00000544515 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
AC087863.1-201ENST00000544515 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
AC087863.1-201ENST00000544515 CFTRP13569 1480 aa16.87■□□□□ 0.29
AC087863.1-201ENST00000544515 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
AC087863.1-201ENST00000544515 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
AC087863.1-201ENST00000544515 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
AC087863.1-201ENST00000544515 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
AC087863.1-201ENST00000544515 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
AC087863.1-201ENST00000544515 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
AC087863.1-201ENST00000544515 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
AC087863.1-201ENST00000544515 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
AC087863.1-201ENST00000544515 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
AC087863.1-201ENST00000544515 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
AC087863.1-201ENST00000544515 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
AC087863.1-201ENST00000544515 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
AC087863.1-201ENST00000544515 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.2
AC087863.1-201ENST00000544515 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
AC087863.1-201ENST00000544515 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
AC087863.1-201ENST00000544515 SOGA1O94964 1423 aa16.31■□□□□ 0.2
AC087863.1-201ENST00000544515 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
AC087863.1-201ENST00000544515 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
AC087863.1-201ENST00000544515 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
AC087863.1-201ENST00000544515 RIMBP3CA6NJZ7 1639 aa16.26■□□□□ 0.19
AC087863.1-201ENST00000544515 RIMBP3BA6NNM3 1639 aa16.26■□□□□ 0.19
AC087863.1-201ENST00000544515 RIMBP3Q9UFD9 1639 aa16.26■□□□□ 0.19
AC087863.1-201ENST00000544515 FBLN2P98095 1184 aa16.25■□□□□ 0.19
AC087863.1-201ENST00000544515 CHMP7Q8WUX9 453 aaPredicted RBP16.21■□□□□ 0.19
AC087863.1-201ENST00000544515 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
AC087863.1-201ENST00000544515 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
AC087863.1-201ENST00000544515 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
AC087863.1-201ENST00000544515 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
AC087863.1-201ENST00000544515 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
AC087863.1-201ENST00000544515 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
AC087863.1-201ENST00000544515 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
AC087863.1-201ENST00000544515 CUX1P39880 1505 aa16.14■□□□□ 0.18
AC087863.1-201ENST00000544515 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
AC087863.1-201ENST00000544515 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
AC087863.1-201ENST00000544515 CHD1O14646 1710 aa16.13■□□□□ 0.17
AC087863.1-201ENST00000544515 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
AC087863.1-201ENST00000544515 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
AC087863.1-201ENST00000544515 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
AC087863.1-201ENST00000544515 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
AC087863.1-201ENST00000544515 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
AC087863.1-201ENST00000544515 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
AC087863.1-201ENST00000544515 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
AC087863.1-201ENST00000544515 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
AC087863.1-201ENST00000544515 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
AC087863.1-201ENST00000544515 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
AC087863.1-201ENST00000544515 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
AC087863.1-201ENST00000544515 GRIN2AQ12879 1464 aa15.94■□□□□ 0.14
AC087863.1-201ENST00000544515 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
AC087863.1-201ENST00000544515 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
AC087863.1-201ENST00000544515 NUP160Q12769 1436 aa15.9■□□□□ 0.14
AC087863.1-201ENST00000544515 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
AC087863.1-201ENST00000544515 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
AC087863.1-201ENST00000544515 JPH4Q96JJ6 628 aa15.78■□□□□ 0.12
AC087863.1-201ENST00000544515 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
AC087863.1-201ENST00000544515 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
AC087863.1-201ENST00000544515 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms