RNA–Protein interactions for RNA: ENST00000544360.5

HMBS-220, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 3

Gene HMBS, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-220ENST00000544360 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
HMBS-220ENST00000544360 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
HMBS-220ENST00000544360 ABCC9O60706 1549 aa24.1■■□□□ 1.45
HMBS-220ENST00000544360 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
HMBS-220ENST00000544360 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
HMBS-220ENST00000544360 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
HMBS-220ENST00000544360 NACADO15069 1562 aa23.44■■□□□ 1.34
HMBS-220ENST00000544360 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
HMBS-220ENST00000544360 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
HMBS-220ENST00000544360 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
HMBS-220ENST00000544360 SCRIBQ14160 1630 aa23■■□□□ 1.27
HMBS-220ENST00000544360 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
HMBS-220ENST00000544360 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
HMBS-220ENST00000544360 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
HMBS-220ENST00000544360 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
HMBS-220ENST00000544360 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
HMBS-220ENST00000544360 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
HMBS-220ENST00000544360 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.12
HMBS-220ENST00000544360 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
HMBS-220ENST00000544360 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
HMBS-220ENST00000544360 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
HMBS-220ENST00000544360 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
HMBS-220ENST00000544360 WIZO95785 1651 aa21.78■■□□□ 1.08
HMBS-220ENST00000544360 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
HMBS-220ENST00000544360 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
HMBS-220ENST00000544360 CC2D2AQ9P2K1 1620 aa21.72■■□□□ 1.07
HMBS-220ENST00000544360 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
HMBS-220ENST00000544360 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
HMBS-220ENST00000544360 NCAPD3P42695 1498 aa21.64■■□□□ 1.05
HMBS-220ENST00000544360 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
HMBS-220ENST00000544360 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
HMBS-220ENST00000544360 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
HMBS-220ENST00000544360 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
HMBS-220ENST00000544360 CFTRP13569 1480 aa21.04■□□□□ 0.96
HMBS-220ENST00000544360 NESP48681 1621 aa20.98■□□□□ 0.95
HMBS-220ENST00000544360 LAMC3Q9Y6N6 1575 aa20.94■□□□□ 0.94
HMBS-220ENST00000544360 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
HMBS-220ENST00000544360 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.94
HMBS-220ENST00000544360 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
HMBS-220ENST00000544360 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
HMBS-220ENST00000544360 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
HMBS-220ENST00000544360 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
HMBS-220ENST00000544360 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
HMBS-220ENST00000544360 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.91
HMBS-220ENST00000544360 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
HMBS-220ENST00000544360 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.9
HMBS-220ENST00000544360 CUX1P39880 1505 aa20.61■□□□□ 0.89
HMBS-220ENST00000544360 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
HMBS-220ENST00000544360 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
HMBS-220ENST00000544360 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
HMBS-220ENST00000544360 DNAJC5Q9H3Z4 198 aa20.56■□□□□ 0.88
HMBS-220ENST00000544360 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
HMBS-220ENST00000544360 TOPBP1Q92547 1522 aa20.56■□□□□ 0.88
HMBS-220ENST00000544360 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
HMBS-220ENST00000544360 BIVM-ERCC5R4GMW8 1640 aa20.5■□□□□ 0.87
HMBS-220ENST00000544360 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
HMBS-220ENST00000544360 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
HMBS-220ENST00000544360 WDR62O43379 1518 aa20.44■□□□□ 0.86
HMBS-220ENST00000544360 SOGA1O94964 1423 aa20.43■□□□□ 0.86
HMBS-220ENST00000544360 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
HMBS-220ENST00000544360 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
HMBS-220ENST00000544360 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
HMBS-220ENST00000544360 CUX2O14529 1486 aa20.36■□□□□ 0.85
HMBS-220ENST00000544360 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
HMBS-220ENST00000544360 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
HMBS-220ENST00000544360 EEA1Q15075 1411 aa20.29■□□□□ 0.84
HMBS-220ENST00000544360 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
HMBS-220ENST00000544360 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
HMBS-220ENST00000544360 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
HMBS-220ENST00000544360 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
HMBS-220ENST00000544360 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
HMBS-220ENST00000544360 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
HMBS-220ENST00000544360 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.822e-8■■■■■ 30.1
HMBS-220ENST00000544360 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
HMBS-220ENST00000544360 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
HMBS-220ENST00000544360 IGF1RP08069 1367 aa20.13■□□□□ 0.81
HMBS-220ENST00000544360 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
HMBS-220ENST00000544360 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
HMBS-220ENST00000544360 GRIN2BQ13224 1484 aa20.08■□□□□ 0.81
HMBS-220ENST00000544360 ABCA5Q8WWZ7 1642 aa20.07■□□□□ 0.8
HMBS-220ENST00000544360 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
HMBS-220ENST00000544360 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
HMBS-220ENST00000544360 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
HMBS-220ENST00000544360 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
HMBS-220ENST00000544360 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
HMBS-220ENST00000544360 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
HMBS-220ENST00000544360 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
HMBS-220ENST00000544360 FBLN2P98095 1184 aa19.97■□□□□ 0.79
HMBS-220ENST00000544360 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
HMBS-220ENST00000544360 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
HMBS-220ENST00000544360 KIF21BO75037 1637 aa19.95■□□□□ 0.78
HMBS-220ENST00000544360 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
HMBS-220ENST00000544360 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
HMBS-220ENST00000544360 CUL7Q14999 1698 aa19.94■□□□□ 0.78
HMBS-220ENST00000544360 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
HMBS-220ENST00000544360 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
HMBS-220ENST00000544360 TNIKQ9UKE5 1360 aa19.85■□□□□ 0.77
HMBS-220ENST00000544360 RANGAP1P46060 587 aaPredicted RBP19.85■□□□□ 0.77
HMBS-220ENST00000544360 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
HMBS-220ENST00000544360 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms