RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 NISCHQ9Y2I1 1504 aa41.57■■■■■ 4.25
CHERP-202ENST00000544299 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
CHERP-202ENST00000544299 ZCCHC6Q5VYS8 1495 aaKnown RBP34.92■■■■□ 3.18
CHERP-202ENST00000544299 ABCC9O60706 1549 aa34.43■■■■□ 3.1
CHERP-202ENST00000544299 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
CHERP-202ENST00000544299 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
CHERP-202ENST00000544299 MYO15BQ96JP2 1530 aa34.03■■■■□ 3.04
CHERP-202ENST00000544299 NACADO15069 1562 aa33.84■■■■□ 3.01
CHERP-202ENST00000544299 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
CHERP-202ENST00000544299 RB1CC1Q8TDY2 1594 aa33.57■■■□□ 2.96
CHERP-202ENST00000544299 SCRIBQ14160 1630 aa33.37■■■□□ 2.93
CHERP-202ENST00000544299 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
CHERP-202ENST00000544299 BICRAQ9NZM4 1560 aa32.64■■■□□ 2.82
CHERP-202ENST00000544299 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
CHERP-202ENST00000544299 SUPT5HO00267 1087 aaKnown RBP32.34■■■□□ 2.77
CHERP-202ENST00000544299 CECR2Q9BXF3 1484 aa32.32■■■□□ 2.77
CHERP-202ENST00000544299 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
CHERP-202ENST00000544299 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
CHERP-202ENST00000544299 BAZ1AQ9NRL2 1556 aaPredicted RBP32.08■■■□□ 2.73
CHERP-202ENST00000544299 SMARCA4P51532 1647 aa32■■■□□ 2.71
CHERP-202ENST00000544299 WIZO95785 1651 aa31.85■■■□□ 2.69
CHERP-202ENST00000544299 PEG3Q9GZU2 1588 aa31.63■■■□□ 2.65
CHERP-202ENST00000544299 EIF4G1Q04637 1599 aaKnown RBP31.62■■■□□ 2.65
CHERP-202ENST00000544299 TOP2AP11388 1531 aaKnown RBP31.52■■■□□ 2.64
CHERP-202ENST00000544299 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
CHERP-202ENST00000544299 SMARCA2P51531 1590 aa31.45■■■□□ 2.62
CHERP-202ENST00000544299 BAZ1BQ9UIG0 1483 aaKnown RBP31.27■■■□□ 2.6
CHERP-202ENST00000544299 NCAPD3P42695 1498 aa31.24■■■□□ 2.59
CHERP-202ENST00000544299 HMGXB3Q12766 1538 aa31.2■■■□□ 2.59
CHERP-202ENST00000544299 CC2D2AQ9P2K1 1620 aa31.18■■■□□ 2.58
CHERP-202ENST00000544299 CCDC88BA6NC98 1476 aa31.18■■■□□ 2.58
CHERP-202ENST00000544299 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
CHERP-202ENST00000544299 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.48
CHERP-202ENST00000544299 CFTRP13569 1480 aa30.51■■■□□ 2.47
CHERP-202ENST00000544299 ABCC8Q09428 1581 aa30.48■■■□□ 2.47
CHERP-202ENST00000544299 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
CHERP-202ENST00000544299 CADPSQ9ULU8 1353 aa30.39■■■□□ 2.46
CHERP-202ENST00000544299 PRDM2Q13029 1718 aa30.38■■■□□ 2.45
CHERP-202ENST00000544299 WRNQ14191 1432 aaPredicted RBP eCLIP30.26■■■□□ 2.44
CHERP-202ENST00000544299 NESP48681 1621 aa30.22■■■□□ 2.43
CHERP-202ENST00000544299 SYNJ1O43426 1573 aa30.21■■■□□ 2.43
CHERP-202ENST00000544299 LAMC3Q9Y6N6 1575 aa30.19■■■□□ 2.42
CHERP-202ENST00000544299 TOP2BQ02880 1626 aa30.08■■■□□ 2.41
CHERP-202ENST00000544299 FANCD2Q9BXW9 1451 aa30.08■■■□□ 2.41
CHERP-202ENST00000544299 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
CHERP-202ENST00000544299 CUX1P39880 1505 aa30.05■■■□□ 2.4
CHERP-202ENST00000544299 PDS5BQ9NTI5 1447 aa29.9■■■□□ 2.38
CHERP-202ENST00000544299 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
CHERP-202ENST00000544299 KIF21AQ7Z4S6 1674 aa29.87■■■□□ 2.37
CHERP-202ENST00000544299 SOGA1O94964 1423 aa29.87■■■□□ 2.37
CHERP-202ENST00000544299 FAM9AQ8IZU1 332 aaPredicted RBP29.85■■■□□ 2.37
CHERP-202ENST00000544299 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
CHERP-202ENST00000544299 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
CHERP-202ENST00000544299 TOPBP1Q92547 1522 aa29.76■■■□□ 2.36
CHERP-202ENST00000544299 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
CHERP-202ENST00000544299 EEA1Q15075 1411 aa29.74■■■□□ 2.35
CHERP-202ENST00000544299 LOC105371045A0A1W2PR82 267 aa29.74■■■□□ 2.35
CHERP-202ENST00000544299 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
CHERP-202ENST00000544299 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
CHERP-202ENST00000544299 MRC2Q9UBG0 1479 aa29.59■■■□□ 2.33
CHERP-202ENST00000544299 CSRNP3Q8WYN3 585 aa29.57■■■□□ 2.32
CHERP-202ENST00000544299 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
CHERP-202ENST00000544299 KIF27Q86VH2 1401 aa29.49■■■□□ 2.31
CHERP-202ENST00000544299 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
CHERP-202ENST00000544299 CUX2O14529 1486 aa29.47■■■□□ 2.31
CHERP-202ENST00000544299 WDR62O43379 1518 aa29.47■■■□□ 2.31
CHERP-202ENST00000544299 ABCA10Q8WWZ4 1543 aa29.46■■■□□ 2.31
CHERP-202ENST00000544299 THOC2Q8NI27 1593 aaKnown RBP29.44■■■□□ 2.3
CHERP-202ENST00000544299 WDR97A6NE52 1622 aa29.44■■■□□ 2.3
CHERP-202ENST00000544299 KIF21BO75037 1637 aa29.43■■■□□ 2.3
CHERP-202ENST00000544299 EHMT2Q96KQ7 1210 aa29.41■■■□□ 2.3
CHERP-202ENST00000544299 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
CHERP-202ENST00000544299 GOLGA3Q08378 1498 aa29.34■■■□□ 2.29
CHERP-202ENST00000544299 PRXQ9BXM0 1461 aa29.32■■■□□ 2.28
CHERP-202ENST00000544299 IGF1RP08069 1367 aa29.27■■■□□ 2.28
CHERP-202ENST00000544299 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
CHERP-202ENST00000544299 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
CHERP-202ENST00000544299 ERICH3Q5RHP9 1530 aa29.24■■■□□ 2.27
CHERP-202ENST00000544299 TNIKQ9UKE5 1360 aa29.22■■■□□ 2.27
CHERP-202ENST00000544299 IFT140Q96RY7 1462 aa29.19■■■□□ 2.26
CHERP-202ENST00000544299 TDRD9Q8NDG6 1382 aaKnown RBP29.18■■■□□ 2.26
CHERP-202ENST00000544299 GAPVD1Q14C86 1478 aa29.14■■■□□ 2.26
CHERP-202ENST00000544299 UBTFP17480 764 aaKnown RBP29.11■■■□□ 2.25
CHERP-202ENST00000544299 CARMIL1Q5VZK9 1371 aa29.1■■■□□ 2.25
CHERP-202ENST00000544299 CUL7Q14999 1698 aa29.08■■■□□ 2.25
CHERP-202ENST00000544299 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
CHERP-202ENST00000544299 CEP162Q5TB80 1403 aa29.06■■■□□ 2.24
CHERP-202ENST00000544299 PBRM1Q86U86 1689 aa29.04■■■□□ 2.24
CHERP-202ENST00000544299 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.242e-7■■■■□ 25.2
CHERP-202ENST00000544299 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
CHERP-202ENST00000544299 GRIN2BQ13224 1484 aa28.94■■■□□ 2.22
CHERP-202ENST00000544299 ADAMTS12P58397 1594 aa28.89■■■□□ 2.22
CHERP-202ENST00000544299 CLIP1P30622 1438 aa28.86■■■□□ 2.21
CHERP-202ENST00000544299 FHAD1B1AJZ9 1412 aa28.83■■■□□ 2.21
CHERP-202ENST00000544299 SNAPC4Q5SXM2 1469 aa28.79■■■□□ 2.2
CHERP-202ENST00000544299 CTTNBP2Q8WZ74 1663 aa28.75■■■□□ 2.19
CHERP-202ENST00000544299 MAGI1Q96QZ7 1491 aaPredicted RBP28.72■■■□□ 2.19
CHERP-202ENST00000544299 RANGAP1P46060 587 aaPredicted RBP28.68■■■□□ 2.18
CHERP-202ENST00000544299 ARAP1Q96P48 1450 aa28.66■■■□□ 2.18
CHERP-202ENST00000544299 ARHGAP35Q9NRY4 1499 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms