RNA–Protein interactions for RNA: ENST00000543940.1

EIF2B1-206, Transcript of eukaryotic translation initiation factor 2B subunit alpha, humanhuman

TSL 3

Gene EIF2B1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF2B1-206ENST00000543940 NISCHQ9Y2I1 1504 aa55.47■■■■■ 6.47
EIF2B1-206ENST00000543940 CCDC180Q9P1Z9 1646 aa49.8■■■■■ 5.56
EIF2B1-206ENST00000543940 ABCC9O60706 1549 aa49.47■■■■■ 5.51
EIF2B1-206ENST00000543940 RB1CC1Q8TDY2 1594 aa47.24■■■■■ 5.15
EIF2B1-206ENST00000543940 NACADO15069 1562 aa46.97■■■■■ 5.11
EIF2B1-206ENST00000543940 DCAF8L2P0C7V8 631 aa46.51■■■■■ 5.04
EIF2B1-206ENST00000543940 MYO15BQ96JP2 1530 aa46.41■■■■■ 5.02
EIF2B1-206ENST00000543940 UNC13AQ9UPW8 1703 aa46.26■■■■■ 5
EIF2B1-206ENST00000543940 DNAJC5BQ9UF47 199 aa46.17■■■■■ 4.98
EIF2B1-206ENST00000543940 ZCCHC6Q5VYS8 1495 aaKnown RBP46.06■■■■■ 4.96
EIF2B1-206ENST00000543940 PABPN1Q86U42 306 aaKnown RBP eCLIP45.99■■■■■ 4.95
EIF2B1-206ENST00000543940 BICRAQ9NZM4 1560 aa45.88■■■■■ 4.94
EIF2B1-206ENST00000543940 DCAF1Q9Y4B6 1507 aa45.88■■■■■ 4.94
EIF2B1-206ENST00000543940 SHROOM4Q9ULL8 1493 aa45.32■■■■■ 4.85
EIF2B1-206ENST00000543940 SCRIBQ14160 1630 aa45.31■■■■■ 4.84
EIF2B1-206ENST00000543940 CC2D2AQ9P2K1 1620 aa44.76■■■■■ 4.76
EIF2B1-206ENST00000543940 EIF4G1Q04637 1599 aaKnown RBP44.73■■■■■ 4.75
EIF2B1-206ENST00000543940 CECR2Q9BXF3 1484 aa44.56■■■■■ 4.72
EIF2B1-206ENST00000543940 NCAPD3P42695 1498 aa43.32■■■■■ 4.52
EIF2B1-206ENST00000543940 SMARCA4P51532 1647 aa43.27■■■■■ 4.52
EIF2B1-206ENST00000543940 ATAD2BQ9ULI0 1458 aa43.22■■■■■ 4.51
EIF2B1-206ENST00000543940 SMARCA2P51531 1590 aa43.14■■■■■ 4.5
EIF2B1-206ENST00000543940 HMGXB3Q12766 1538 aa43.09■■■■■ 4.49
EIF2B1-206ENST00000543940 BAZ1AQ9NRL2 1556 aaPredicted RBP43.07■■■■■ 4.48
EIF2B1-206ENST00000543940 PEG3Q9GZU2 1588 aa42.89■■■■■ 4.46
EIF2B1-206ENST00000543940 BAZ1BQ9UIG0 1483 aaKnown RBP42.81■■■■■ 4.44
EIF2B1-206ENST00000543940 MROH2BQ7Z745 1585 aa42.73■■■■■ 4.43
EIF2B1-206ENST00000543940 ERCC6Q03468 1493 aa42.69■■■■■ 4.42
EIF2B1-206ENST00000543940 CUX2O14529 1486 aa42.62■■■■■ 4.41
EIF2B1-206ENST00000543940 NESP48681 1621 aa42.57■■■■■ 4.4
EIF2B1-206ENST00000543940 LAMC3Q9Y6N6 1575 aa42.36■■■■■ 4.37
EIF2B1-206ENST00000543940 DNAJC5Q9H3Z4 198 aa42.27■■■■■ 4.36
EIF2B1-206ENST00000543940 WIZO95785 1651 aa42.25■■■■■ 4.35
EIF2B1-206ENST00000543940 THOC2Q8NI27 1593 aaKnown RBP42.21■■■■■ 4.35
EIF2B1-206ENST00000543940 KIF21AQ7Z4S6 1674 aa42.12■■■■■ 4.33
EIF2B1-206ENST00000543940 PDS5BQ9NTI5 1447 aa42.03■■■■■ 4.32
EIF2B1-206ENST00000543940 CADPSQ9ULU8 1353 aa41.97■■■■■ 4.31
EIF2B1-206ENST00000543940 RSF1Q96T23 1441 aaPredicted RBP41.89■■■■■ 4.3
EIF2B1-206ENST00000543940 TOP2AP11388 1531 aaKnown RBP41.75■■■■■ 4.27
EIF2B1-206ENST00000543940 MRC2Q9UBG0 1479 aa41.71■■■■■ 4.27
EIF2B1-206ENST00000543940 WDR62O43379 1518 aa41.64■■■■■ 4.26
EIF2B1-206ENST00000543940 CFTRP13569 1480 aa41.58■■■■■ 4.25
EIF2B1-206ENST00000543940 CEP164Q9UPV0 1460 aa41.58■■■■■ 4.25
EIF2B1-206ENST00000543940 FANCD2Q9BXW9 1451 aa41.53■■■■■ 4.24
EIF2B1-206ENST00000543940 PRDM2Q13029 1718 aa41.32■■■■■ 4.2
EIF2B1-206ENST00000543940 CCDC88BA6NC98 1476 aa41.21■■■■■ 4.19
EIF2B1-206ENST00000543940 URB2Q14146 1524 aaKnown RBP41.19■■■■■ 4.18
EIF2B1-206ENST00000543940 TOPBP1Q92547 1522 aa40.78■■■■■ 4.12
EIF2B1-206ENST00000543940 IFT140Q96RY7 1462 aa40.72■■■■■ 4.11
EIF2B1-206ENST00000543940 ABCC8Q09428 1581 aa40.69■■■■■ 4.11
EIF2B1-206ENST00000543940 DNMBPQ6XZF7 1577 aa40.68■■■■■ 4.1
EIF2B1-206ENST00000543940 ZNF608Q9ULD9 1512 aaPredicted RBP40.63■■■■■ 4.1
EIF2B1-206ENST00000543940 OSCARQ8IYS5 282 aa40.56■■■■■ 4.08
EIF2B1-206ENST00000543940 EIF4G3O43432 1585 aaKnown RBP40.5■■■■■ 4.07
EIF2B1-206ENST00000543940 TARBP1Q13395 1621 aaKnown RBP40.45■■■■■ 4.07
EIF2B1-206ENST00000543940 TRIM41Q8WV44 630 aa40.45■■■■■ 4.07
EIF2B1-206ENST00000543940 POLA1P09884 1462 aaPredicted RBP40.38■■■■■ 4.05
EIF2B1-206ENST00000543940 AQRO60306 1485 aaKnown RBP eCLIP40.25■■■■■ 4.03
EIF2B1-206ENST00000543940 RAD54L2Q9Y4B4 1467 aa40.19■■■■■ 4.02
EIF2B1-206ENST00000543940 CHD1O14646 1710 aa40.17■■■■■ 4.02
EIF2B1-206ENST00000543940 RIMBP3CA6NJZ7 1639 aa40.16■■■■■ 4.02
EIF2B1-206ENST00000543940 RIMBP3BA6NNM3 1639 aa40.16■■■■■ 4.02
EIF2B1-206ENST00000543940 RIMBP3Q9UFD9 1639 aa40.16■■■■■ 4.02
EIF2B1-206ENST00000543940 CUX1P39880 1505 aa40.16■■■■■ 4.02
EIF2B1-206ENST00000543940 FGD5Q6ZNL6 1462 aa40.14■■■■■ 4.02
EIF2B1-206ENST00000543940 SOGA1O94964 1423 aa40.13■■■■■ 4.01
EIF2B1-206ENST00000543940 WDR97A6NE52 1622 aa40.09■■■■■ 4.01
EIF2B1-206ENST00000543940 ARHGEF11O15085 1522 aa40.05■■■■■ 4
EIF2B1-206ENST00000543940 SUPT5HO00267 1087 aaKnown RBP40.02■■■■■ 4
EIF2B1-206ENST00000543940 TDRD9Q8NDG6 1382 aaKnown RBP40.01■■■■■ 4
EIF2B1-206ENST00000543940 SNAPC4Q5SXM2 1469 aa39.89■■■■□ 3.98
EIF2B1-206ENST00000543940 FBLN2P98095 1184 aa39.85■■■■□ 3.97
EIF2B1-206ENST00000543940 MAGI1Q96QZ7 1491 aaPredicted RBP39.81■■■■□ 3.96
EIF2B1-206ENST00000543940 GRIN2BQ13224 1484 aa39.81■■■■□ 3.96
EIF2B1-206ENST00000543940 PBRM1Q86U86 1689 aa39.76■■■■□ 3.96
EIF2B1-206ENST00000543940 ABCA10Q8WWZ4 1543 aa39.71■■■■□ 3.95
EIF2B1-206ENST00000543940 CLASP1Q7Z460 1538 aa39.7■■■■□ 3.95
EIF2B1-206ENST00000543940 ABCA5Q8WWZ7 1642 aa39.7■■■■□ 3.95
EIF2B1-206ENST00000543940 GAPVD1Q14C86 1478 aa39.68■■■■□ 3.94
EIF2B1-206ENST00000543940 SYNJ2O15056 1496 aa39.68■■■■□ 3.94
EIF2B1-206ENST00000543940 SYNJ1O43426 1573 aa39.67■■■■□ 3.94
EIF2B1-206ENST00000543940 ARAP1Q96P48 1450 aa39.66■■■■□ 3.94
EIF2B1-206ENST00000543940 BIVM-ERCC5R4GMW8 1640 aa39.62■■■■□ 3.93
EIF2B1-206ENST00000543940 CHMP7Q8WUX9 453 aaPredicted RBP39.61■■■■□ 3.93
EIF2B1-206ENST00000543940 TOP2BQ02880 1626 aa39.59■■■■□ 3.93
EIF2B1-206ENST00000543940 CYB5RLQ6IPT4 315 aa39.59■■■■□ 3.93
EIF2B1-206ENST00000543940 WRNQ14191 1432 aaPredicted RBP eCLIP39.54■■■■□ 3.92
EIF2B1-206ENST00000543940 ADAMTS12P58397 1594 aa39.38■■■■□ 3.9
EIF2B1-206ENST00000543940 GRIN2AQ12879 1464 aa39.31■■■■□ 3.88
EIF2B1-206ENST00000543940 ERICH3Q5RHP9 1530 aa39.24■■■■□ 3.87
EIF2B1-206ENST00000543940 CEP170Q5SW79 1584 aa39.2■■■■□ 3.87
EIF2B1-206ENST00000543940 FHAD1B1AJZ9 1412 aa39.19■■■■□ 3.86
EIF2B1-206ENST00000543940 NUP160Q12769 1436 aa39.18■■■■□ 3.86
EIF2B1-206ENST00000543940 TRHP20396 242 aaPredicted RBP39.06■■■■□ 3.84
EIF2B1-206ENST00000543940 ERCC6L2Q5T890 1561 aa39.06■■■■□ 3.84
EIF2B1-206ENST00000543940 SHROOM2Q13796 1616 aa39.05■■■■□ 3.84
EIF2B1-206ENST00000543940 RUSC2Q8N2Y8 1516 aa38.84■■■■□ 3.81
EIF2B1-206ENST00000543940 KIF27Q86VH2 1401 aa38.74■■■■□ 3.79
EIF2B1-206ENST00000543940 CUL7Q14999 1698 aa38.74■■■■□ 3.79
EIF2B1-206ENST00000543940 PRG4Q92954 1404 aaPredicted RBP38.72■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms