RNA–Protein interactions for RNA: ENST00000543676.1

ACSF3-214, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 2

Gene ACSF3, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-214ENST00000543676 NISCHQ9Y2I1 1504 aa40.15■■■■■ 4.02
ACSF3-214ENST00000543676 CCDC180Q9P1Z9 1646 aa36.21■■■■□ 3.39
ACSF3-214ENST00000543676 ABCC9O60706 1549 aa36.04■■■■□ 3.36
ACSF3-214ENST00000543676 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
ACSF3-214ENST00000543676 NACADO15069 1562 aa34.12■■■■□ 3.05
ACSF3-214ENST00000543676 DCAF8L2P0C7V8 631 aa33.84■■■■□ 3.01
ACSF3-214ENST00000543676 UNC13AQ9UPW8 1703 aa33.75■■■□□ 2.99
ACSF3-214ENST00000543676 DNAJC5BQ9UF47 199 aa33.62■■■□□ 2.97
ACSF3-214ENST00000543676 MYO15BQ96JP2 1530 aa33.59■■■□□ 2.97
ACSF3-214ENST00000543676 PABPN1Q86U42 306 aaKnown RBP eCLIP33.45■■■□□ 2.95
ACSF3-214ENST00000543676 BICRAQ9NZM4 1560 aa33.32■■■□□ 2.92
ACSF3-214ENST00000543676 ZCCHC6Q5VYS8 1495 aaKnown RBP33.3■■■□□ 2.92
ACSF3-214ENST00000543676 DCAF1Q9Y4B6 1507 aa33.18■■■□□ 2.9
ACSF3-214ENST00000543676 SCRIBQ14160 1630 aa32.94■■■□□ 2.86
ACSF3-214ENST00000543676 SHROOM4Q9ULL8 1493 aa32.92■■■□□ 2.86
ACSF3-214ENST00000543676 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
ACSF3-214ENST00000543676 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
ACSF3-214ENST00000543676 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
ACSF3-214ENST00000543676 SMARCA4P51532 1647 aa31.41■■■□□ 2.62
ACSF3-214ENST00000543676 NCAPD3P42695 1498 aa31.4■■■□□ 2.62
ACSF3-214ENST00000543676 SMARCA2P51531 1590 aa31.34■■■□□ 2.61
ACSF3-214ENST00000543676 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
ACSF3-214ENST00000543676 HMGXB3Q12766 1538 aa31.28■■■□□ 2.6
ACSF3-214ENST00000543676 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
ACSF3-214ENST00000543676 ERCC6Q03468 1493 aa31.18■■■□□ 2.58
ACSF3-214ENST00000543676 CUX2O14529 1486 aa31.09■■■□□ 2.57
ACSF3-214ENST00000543676 BAZ1BQ9UIG0 1483 aaKnown RBP31.09■■■□□ 2.57
ACSF3-214ENST00000543676 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
ACSF3-214ENST00000543676 NESP48681 1621 aa30.94■■■□□ 2.54
ACSF3-214ENST00000543676 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
ACSF3-214ENST00000543676 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
ACSF3-214ENST00000543676 LAMC3Q9Y6N6 1575 aa30.82■■■□□ 2.52
ACSF3-214ENST00000543676 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
ACSF3-214ENST00000543676 KIF21AQ7Z4S6 1674 aa30.72■■■□□ 2.51
ACSF3-214ENST00000543676 WIZO95785 1651 aa30.65■■■□□ 2.5
ACSF3-214ENST00000543676 PDS5BQ9NTI5 1447 aa30.57■■■□□ 2.48
ACSF3-214ENST00000543676 CADPSQ9ULU8 1353 aa30.44■■■□□ 2.46
ACSF3-214ENST00000543676 MRC2Q9UBG0 1479 aa30.33■■■□□ 2.45
ACSF3-214ENST00000543676 WDR62O43379 1518 aa30.27■■■□□ 2.44
ACSF3-214ENST00000543676 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
ACSF3-214ENST00000543676 TOP2AP11388 1531 aaKnown RBP30.24■■■□□ 2.43
ACSF3-214ENST00000543676 RSF1Q96T23 1441 aaPredicted RBP30.23■■■□□ 2.43
ACSF3-214ENST00000543676 FANCD2Q9BXW9 1451 aa30.16■■■□□ 2.42
ACSF3-214ENST00000543676 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
ACSF3-214ENST00000543676 CFTRP13569 1480 aa30.12■■■□□ 2.41
ACSF3-214ENST00000543676 URB2Q14146 1524 aaKnown RBP29.9■■■□□ 2.38
ACSF3-214ENST00000543676 CCDC88BA6NC98 1476 aa29.81■■■□□ 2.36
ACSF3-214ENST00000543676 TRIM41Q8WV44 630 aa29.67■■■□□ 2.34
ACSF3-214ENST00000543676 IFT140Q96RY7 1462 aa29.6■■■□□ 2.33
ACSF3-214ENST00000543676 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
ACSF3-214ENST00000543676 OSCARQ8IYS5 282 aa29.58■■■□□ 2.33
ACSF3-214ENST00000543676 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
ACSF3-214ENST00000543676 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
ACSF3-214ENST00000543676 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
ACSF3-214ENST00000543676 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
ACSF3-214ENST00000543676 TARBP1Q13395 1621 aaKnown RBP29.37■■■□□ 2.29
ACSF3-214ENST00000543676 RIMBP3CA6NJZ7 1639 aa29.34■■■□□ 2.29
ACSF3-214ENST00000543676 RIMBP3BA6NNM3 1639 aa29.34■■■□□ 2.29
ACSF3-214ENST00000543676 RIMBP3Q9UFD9 1639 aa29.34■■■□□ 2.29
ACSF3-214ENST00000543676 CHD1O14646 1710 aa29.34■■■□□ 2.29
ACSF3-214ENST00000543676 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
ACSF3-214ENST00000543676 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.27
ACSF3-214ENST00000543676 ARHGEF11O15085 1522 aa29.2■■■□□ 2.26
ACSF3-214ENST00000543676 RAD54L2Q9Y4B4 1467 aa29.15■■■□□ 2.26
ACSF3-214ENST00000543676 WDR97A6NE52 1622 aa29.13■■■□□ 2.25
ACSF3-214ENST00000543676 FGD5Q6ZNL6 1462 aa29.12■■■□□ 2.25
ACSF3-214ENST00000543676 SOGA1O94964 1423 aa29.11■■■□□ 2.25
ACSF3-214ENST00000543676 CUX1P39880 1505 aa29.08■■■□□ 2.25
ACSF3-214ENST00000543676 FBLN2P98095 1184 aa29.06■■■□□ 2.24
ACSF3-214ENST00000543676 TDRD9Q8NDG6 1382 aaKnown RBP29.02■■■□□ 2.24
ACSF3-214ENST00000543676 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
ACSF3-214ENST00000543676 PBRM1Q86U86 1689 aa28.98■■■□□ 2.23
ACSF3-214ENST00000543676 MAGI1Q96QZ7 1491 aaPredicted RBP28.93■■■□□ 2.22
ACSF3-214ENST00000543676 SUPT5HO00267 1087 aaKnown RBP28.91■■■□□ 2.22
ACSF3-214ENST00000543676 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
ACSF3-214ENST00000543676 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
ACSF3-214ENST00000543676 CYB5RLQ6IPT4 315 aa28.89■■■□□ 2.22
ACSF3-214ENST00000543676 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
ACSF3-214ENST00000543676 CLASP1Q7Z460 1538 aa28.86■■■□□ 2.21
ACSF3-214ENST00000543676 CHMP7Q8WUX9 453 aaPredicted RBP28.83■■■□□ 2.21
ACSF3-214ENST00000543676 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
ACSF3-214ENST00000543676 SYNJ2O15056 1496 aa28.81■■■□□ 2.2
ACSF3-214ENST00000543676 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
ACSF3-214ENST00000543676 ABCA10Q8WWZ4 1543 aa28.78■■■□□ 2.2
ACSF3-214ENST00000543676 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
ACSF3-214ENST00000543676 TOP2BQ02880 1626 aa28.66■■■□□ 2.18
ACSF3-214ENST00000543676 WRNQ14191 1432 aaPredicted RBP eCLIP28.64■■■□□ 2.18
ACSF3-214ENST00000543676 TRHP20396 242 aaPredicted RBP28.62■■■□□ 2.17
ACSF3-214ENST00000543676 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
ACSF3-214ENST00000543676 GRIN2AQ12879 1464 aa28.54■■■□□ 2.16
ACSF3-214ENST00000543676 CEP170Q5SW79 1584 aa28.46■■■□□ 2.15
ACSF3-214ENST00000543676 ERICH3Q5RHP9 1530 aa28.45■■■□□ 2.15
ACSF3-214ENST00000543676 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
ACSF3-214ENST00000543676 NUP160Q12769 1436 aa28.41■■■□□ 2.14
ACSF3-214ENST00000543676 ERCC6L2Q5T890 1561 aa28.38■■■□□ 2.13
ACSF3-214ENST00000543676 SHROOM2Q13796 1616 aa28.37■■■□□ 2.13
ACSF3-214ENST00000543676 RUSC2Q8N2Y8 1516 aa28.2■■■□□ 2.1
ACSF3-214ENST00000543676 CUL7Q14999 1698 aa28.13■■■□□ 2.09
ACSF3-214ENST00000543676 PRG4Q92954 1404 aaPredicted RBP28.13■■■□□ 2.09
ACSF3-214ENST00000543676 KIF13AQ9H1H9 1805 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms