RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 NISCHQ9Y2I1 1504 aa31.87■■■□□ 2.69
CACNA2D4-216ENST00000543405 ABCC9O60706 1549 aa29.22■■■□□ 2.27
CACNA2D4-216ENST00000543405 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
CACNA2D4-216ENST00000543405 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
CACNA2D4-216ENST00000543405 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
CACNA2D4-216ENST00000543405 NACADO15069 1562 aa27.28■■□□□ 1.96
CACNA2D4-216ENST00000543405 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
CACNA2D4-216ENST00000543405 UNC13AQ9UPW8 1703 aa27■■□□□ 1.91
CACNA2D4-216ENST00000543405 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
CACNA2D4-216ENST00000543405 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
CACNA2D4-216ENST00000543405 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
CACNA2D4-216ENST00000543405 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
CACNA2D4-216ENST00000543405 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
CACNA2D4-216ENST00000543405 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
CACNA2D4-216ENST00000543405 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
CACNA2D4-216ENST00000543405 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
CACNA2D4-216ENST00000543405 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
CACNA2D4-216ENST00000543405 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
CACNA2D4-216ENST00000543405 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
CACNA2D4-216ENST00000543405 CUX2O14529 1486 aa25.4■■□□□ 1.66
CACNA2D4-216ENST00000543405 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
CACNA2D4-216ENST00000543405 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
CACNA2D4-216ENST00000543405 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
CACNA2D4-216ENST00000543405 HMGXB3Q12766 1538 aa25■■□□□ 1.59
CACNA2D4-216ENST00000543405 NESP48681 1621 aa24.98■■□□□ 1.59
CACNA2D4-216ENST00000543405 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
CACNA2D4-216ENST00000543405 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
CACNA2D4-216ENST00000543405 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
CACNA2D4-216ENST00000543405 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
CACNA2D4-216ENST00000543405 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
CACNA2D4-216ENST00000543405 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
CACNA2D4-216ENST00000543405 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
CACNA2D4-216ENST00000543405 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
CACNA2D4-216ENST00000543405 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
CACNA2D4-216ENST00000543405 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
CACNA2D4-216ENST00000543405 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
CACNA2D4-216ENST00000543405 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
CACNA2D4-216ENST00000543405 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
CACNA2D4-216ENST00000543405 MRC2Q9UBG0 1479 aa24.41■■□□□ 1.5
CACNA2D4-216ENST00000543405 WDR62O43379 1518 aa24.4■■□□□ 1.5
CACNA2D4-216ENST00000543405 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
CACNA2D4-216ENST00000543405 WIZO95785 1651 aa24.23■■□□□ 1.47
CACNA2D4-216ENST00000543405 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.47
CACNA2D4-216ENST00000543405 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
CACNA2D4-216ENST00000543405 CFTRP13569 1480 aa24.05■■□□□ 1.44
CACNA2D4-216ENST00000543405 OSCARQ8IYS5 282 aa24.04■■□□□ 1.44
CACNA2D4-216ENST00000543405 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
CACNA2D4-216ENST00000543405 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
CACNA2D4-216ENST00000543405 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
CACNA2D4-216ENST00000543405 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
CACNA2D4-216ENST00000543405 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
CACNA2D4-216ENST00000543405 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.41
CACNA2D4-216ENST00000543405 PRDM2Q13029 1718 aa23.82■■□□□ 1.4
CACNA2D4-216ENST00000543405 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
CACNA2D4-216ENST00000543405 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
CACNA2D4-216ENST00000543405 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
CACNA2D4-216ENST00000543405 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
CACNA2D4-216ENST00000543405 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
CACNA2D4-216ENST00000543405 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
CACNA2D4-216ENST00000543405 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
CACNA2D4-216ENST00000543405 CHD1O14646 1710 aa23.53■■□□□ 1.36
CACNA2D4-216ENST00000543405 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
CACNA2D4-216ENST00000543405 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
CACNA2D4-216ENST00000543405 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
CACNA2D4-216ENST00000543405 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
CACNA2D4-216ENST00000543405 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.341e-6■■■■□ 20.3
CACNA2D4-216ENST00000543405 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
CACNA2D4-216ENST00000543405 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
CACNA2D4-216ENST00000543405 FBLN2P98095 1184 aa23.32■■□□□ 1.32
CACNA2D4-216ENST00000543405 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
CACNA2D4-216ENST00000543405 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
CACNA2D4-216ENST00000543405 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
CACNA2D4-216ENST00000543405 WDR97A6NE52 1622 aa23.22■■□□□ 1.31
CACNA2D4-216ENST00000543405 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
CACNA2D4-216ENST00000543405 SOGA1O94964 1423 aa23.18■■□□□ 1.3
CACNA2D4-216ENST00000543405 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
CACNA2D4-216ENST00000543405 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
CACNA2D4-216ENST00000543405 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
CACNA2D4-216ENST00000543405 CUX1P39880 1505 aa23.09■■□□□ 1.29
CACNA2D4-216ENST00000543405 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
CACNA2D4-216ENST00000543405 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
CACNA2D4-216ENST00000543405 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
CACNA2D4-216ENST00000543405 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
CACNA2D4-216ENST00000543405 PBRM1Q86U86 1689 aa23■■□□□ 1.27
CACNA2D4-216ENST00000543405 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
CACNA2D4-216ENST00000543405 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
CACNA2D4-216ENST00000543405 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.25
CACNA2D4-216ENST00000543405 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
CACNA2D4-216ENST00000543405 CEP170Q5SW79 1584 aa22.77■■□□□ 1.24
CACNA2D4-216ENST00000543405 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
CACNA2D4-216ENST00000543405 NUP160Q12769 1436 aa22.74■■□□□ 1.23
CACNA2D4-216ENST00000543405 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
CACNA2D4-216ENST00000543405 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
CACNA2D4-216ENST00000543405 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
CACNA2D4-216ENST00000543405 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
CACNA2D4-216ENST00000543405 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
CACNA2D4-216ENST00000543405 FHAD1B1AJZ9 1412 aa22.63■■□□□ 1.21
CACNA2D4-216ENST00000543405 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
CACNA2D4-216ENST00000543405 PRG4Q92954 1404 aaPredicted RBP22.52■■□□□ 1.2
CACNA2D4-216ENST00000543405 ABCC10Q5T3U5 1492 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms