RNA–Protein interactions for RNA: ENST00000543226.1

AC003002.1-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC003002.1, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003002.1-201ENST00000543226 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
AC003002.1-201ENST00000543226 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
AC003002.1-201ENST00000543226 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
AC003002.1-201ENST00000543226 ABCC9O60706 1549 aa21.83■■□□□ 1.09
AC003002.1-201ENST00000543226 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
AC003002.1-201ENST00000543226 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
AC003002.1-201ENST00000543226 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
AC003002.1-201ENST00000543226 NACADO15069 1562 aa20.47■□□□□ 0.87
AC003002.1-201ENST00000543226 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
AC003002.1-201ENST00000543226 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
AC003002.1-201ENST00000543226 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
AC003002.1-201ENST00000543226 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
AC003002.1-201ENST00000543226 BICRAQ9NZM4 1560 aa20.11■□□□□ 0.81
AC003002.1-201ENST00000543226 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
AC003002.1-201ENST00000543226 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
AC003002.1-201ENST00000543226 SHROOM4Q9ULL8 1493 aa19.87■□□□□ 0.77
AC003002.1-201ENST00000543226 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
AC003002.1-201ENST00000543226 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
AC003002.1-201ENST00000543226 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
AC003002.1-201ENST00000543226 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
AC003002.1-201ENST00000543226 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
AC003002.1-201ENST00000543226 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
AC003002.1-201ENST00000543226 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
AC003002.1-201ENST00000543226 CUX2O14529 1486 aa19.05■□□□□ 0.64
AC003002.1-201ENST00000543226 FOXD1Q16676 465 aa18.99■□□□□ 0.63
AC003002.1-201ENST00000543226 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
AC003002.1-201ENST00000543226 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
AC003002.1-201ENST00000543226 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
AC003002.1-201ENST00000543226 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
AC003002.1-201ENST00000543226 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
AC003002.1-201ENST00000543226 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
AC003002.1-201ENST00000543226 NESP48681 1621 aa18.66■□□□□ 0.58
AC003002.1-201ENST00000543226 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
AC003002.1-201ENST00000543226 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
AC003002.1-201ENST00000543226 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
AC003002.1-201ENST00000543226 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
AC003002.1-201ENST00000543226 BAZ1AQ9NRL2 1556 aaPredicted RBP18.52■□□□□ 0.56
AC003002.1-201ENST00000543226 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
AC003002.1-201ENST00000543226 POTEDQ86YR6 584 aa18.43■□□□□ 0.54
AC003002.1-201ENST00000543226 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
AC003002.1-201ENST00000543226 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
AC003002.1-201ENST00000543226 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
AC003002.1-201ENST00000543226 WDR62O43379 1518 aa18.28■□□□□ 0.52
AC003002.1-201ENST00000543226 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.52
AC003002.1-201ENST00000543226 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
AC003002.1-201ENST00000543226 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
AC003002.1-201ENST00000543226 WIZO95785 1651 aa18.09■□□□□ 0.49
AC003002.1-201ENST00000543226 FANCD2Q9BXW9 1451 aa18.06■□□□□ 0.48
AC003002.1-201ENST00000543226 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
AC003002.1-201ENST00000543226 CFTRP13569 1480 aa18.01■□□□□ 0.47
AC003002.1-201ENST00000543226 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
AC003002.1-201ENST00000543226 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
AC003002.1-201ENST00000543226 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
AC003002.1-201ENST00000543226 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
AC003002.1-201ENST00000543226 MSH5O43196 834 aa17.88■□□□□ 0.45
AC003002.1-201ENST00000543226 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
AC003002.1-201ENST00000543226 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
AC003002.1-201ENST00000543226 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
AC003002.1-201ENST00000543226 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
AC003002.1-201ENST00000543226 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
AC003002.1-201ENST00000543226 ZNF608Q9ULD9 1512 aaPredicted RBP17.76■□□□□ 0.43
AC003002.1-201ENST00000543226 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
AC003002.1-201ENST00000543226 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
AC003002.1-201ENST00000543226 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
AC003002.1-201ENST00000543226 CHD1O14646 1710 aa17.64■□□□□ 0.41
AC003002.1-201ENST00000543226 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
AC003002.1-201ENST00000543226 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
AC003002.1-201ENST00000543226 CYB5RLQ6IPT4 315 aa17.6■□□□□ 0.41
AC003002.1-201ENST00000543226 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
AC003002.1-201ENST00000543226 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
AC003002.1-201ENST00000543226 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
AC003002.1-201ENST00000543226 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
AC003002.1-201ENST00000543226 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
AC003002.1-201ENST00000543226 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
AC003002.1-201ENST00000543226 WDR97A6NE52 1622 aa17.44■□□□□ 0.38
AC003002.1-201ENST00000543226 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
AC003002.1-201ENST00000543226 FBLN2P98095 1184 aa17.42■□□□□ 0.38
AC003002.1-201ENST00000543226 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
AC003002.1-201ENST00000543226 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
AC003002.1-201ENST00000543226 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
AC003002.1-201ENST00000543226 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
AC003002.1-201ENST00000543226 SOGA1O94964 1423 aa17.36■□□□□ 0.37
AC003002.1-201ENST00000543226 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
AC003002.1-201ENST00000543226 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
AC003002.1-201ENST00000543226 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
AC003002.1-201ENST00000543226 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
AC003002.1-201ENST00000543226 ADRA2BP18089 450 aa17.28■□□□□ 0.36
AC003002.1-201ENST00000543226 SYNJ2O15056 1496 aa17.28■□□□□ 0.36
AC003002.1-201ENST00000543226 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
AC003002.1-201ENST00000543226 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
AC003002.1-201ENST00000543226 CUX1P39880 1505 aa17.24■□□□□ 0.35
AC003002.1-201ENST00000543226 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
AC003002.1-201ENST00000543226 GAPVD1Q14C86 1478 aa17.23■□□□□ 0.35
AC003002.1-201ENST00000543226 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
AC003002.1-201ENST00000543226 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
AC003002.1-201ENST00000543226 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
AC003002.1-201ENST00000543226 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
AC003002.1-201ENST00000543226 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
AC003002.1-201ENST00000543226 SHROOM2Q13796 1616 aa17.04■□□□□ 0.32
AC003002.1-201ENST00000543226 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms