RNA–Protein interactions for RNA: ENST00000543154.1

GTF2H3-211, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-211ENST00000543154 AEBP2Q6ZN18 517 aaPredicted RBP21.67■■□□□ 1.06
GTF2H3-211ENST00000543154 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
GTF2H3-211ENST00000543154 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
GTF2H3-211ENST00000543154 ABCC9O60706 1549 aa18.7■□□□□ 0.58
GTF2H3-211ENST00000543154 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
GTF2H3-211ENST00000543154 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
GTF2H3-211ENST00000543154 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
GTF2H3-211ENST00000543154 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
GTF2H3-211ENST00000543154 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
GTF2H3-211ENST00000543154 NACADO15069 1562 aa17.69■□□□□ 0.42
GTF2H3-211ENST00000543154 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
GTF2H3-211ENST00000543154 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
GTF2H3-211ENST00000543154 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
GTF2H3-211ENST00000543154 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
GTF2H3-211ENST00000543154 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
GTF2H3-211ENST00000543154 FOXD1Q16676 465 aa17.23■□□□□ 0.35
GTF2H3-211ENST00000543154 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
GTF2H3-211ENST00000543154 DCAF1Q9Y4B6 1507 aa17.2■□□□□ 0.34
GTF2H3-211ENST00000543154 SCRIBQ14160 1630 aa17.05■□□□□ 0.32
GTF2H3-211ENST00000543154 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
GTF2H3-211ENST00000543154 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
GTF2H3-211ENST00000543154 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
GTF2H3-211ENST00000543154 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
GTF2H3-211ENST00000543154 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
GTF2H3-211ENST00000543154 NCAPD3P42695 1498 aa16.31■□□□□ 0.2
GTF2H3-211ENST00000543154 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
GTF2H3-211ENST00000543154 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
GTF2H3-211ENST00000543154 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
GTF2H3-211ENST00000543154 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
GTF2H3-211ENST00000543154 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
GTF2H3-211ENST00000543154 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
GTF2H3-211ENST00000543154 MSH5O43196 834 aa16.16■□□□□ 0.18
GTF2H3-211ENST00000543154 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
GTF2H3-211ENST00000543154 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
GTF2H3-211ENST00000543154 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
GTF2H3-211ENST00000543154 CUX2O14529 1486 aa16.12■□□□□ 0.17
GTF2H3-211ENST00000543154 ADRA2BP18089 450 aa16.1■□□□□ 0.17
GTF2H3-211ENST00000543154 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
GTF2H3-211ENST00000543154 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
GTF2H3-211ENST00000543154 NESP48681 1621 aa16.05■□□□□ 0.16
GTF2H3-211ENST00000543154 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
GTF2H3-211ENST00000543154 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
GTF2H3-211ENST00000543154 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
GTF2H3-211ENST00000543154 WIZO95785 1651 aa15.86■□□□□ 0.13
GTF2H3-211ENST00000543154 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
GTF2H3-211ENST00000543154 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
GTF2H3-211ENST00000543154 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
GTF2H3-211ENST00000543154 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
GTF2H3-211ENST00000543154 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
GTF2H3-211ENST00000543154 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
GTF2H3-211ENST00000543154 WDR62O43379 1518 aa15.67■□□□□ 0.1
GTF2H3-211ENST00000543154 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
GTF2H3-211ENST00000543154 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
GTF2H3-211ENST00000543154 CFTRP13569 1480 aa15.64■□□□□ 0.09
GTF2H3-211ENST00000543154 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
GTF2H3-211ENST00000543154 URB2Q14146 1524 aaKnown RBP15.49■□□□□ 0.07
GTF2H3-211ENST00000543154 PRDM2Q13029 1718 aa15.49■□□□□ 0.07
GTF2H3-211ENST00000543154 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
GTF2H3-211ENST00000543154 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
GTF2H3-211ENST00000543154 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
GTF2H3-211ENST00000543154 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
GTF2H3-211ENST00000543154 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
GTF2H3-211ENST00000543154 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
GTF2H3-211ENST00000543154 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
GTF2H3-211ENST00000543154 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
GTF2H3-211ENST00000543154 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
GTF2H3-211ENST00000543154 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■■□□ 15.2
GTF2H3-211ENST00000543154 POLA1P09884 1462 aaPredicted RBP15.19■□□□□ 0.02
GTF2H3-211ENST00000543154 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
GTF2H3-211ENST00000543154 FBLN2P98095 1184 aa15.18■□□□□ 0.02
GTF2H3-211ENST00000543154 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
GTF2H3-211ENST00000543154 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
GTF2H3-211ENST00000543154 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
GTF2H3-211ENST00000543154 SOGA1O94964 1423 aa15.17■□□□□ 0.02
GTF2H3-211ENST00000543154 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
GTF2H3-211ENST00000543154 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
GTF2H3-211ENST00000543154 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
GTF2H3-211ENST00000543154 CHD1O14646 1710 aa15.12■□□□□ 0.01
GTF2H3-211ENST00000543154 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
GTF2H3-211ENST00000543154 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
GTF2H3-211ENST00000543154 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
GTF2H3-211ENST00000543154 CUX1P39880 1505 aa15.07■□□□□ 0
GTF2H3-211ENST00000543154 WDR97A6NE52 1622 aa15.06■□□□□ 0
GTF2H3-211ENST00000543154 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
GTF2H3-211ENST00000543154 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
GTF2H3-211ENST00000543154 GRIN2BQ13224 1484 aa15.01□□□□□ -0.01
GTF2H3-211ENST00000543154 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
GTF2H3-211ENST00000543154 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
GTF2H3-211ENST00000543154 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
GTF2H3-211ENST00000543154 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
GTF2H3-211ENST00000543154 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
GTF2H3-211ENST00000543154 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
GTF2H3-211ENST00000543154 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
GTF2H3-211ENST00000543154 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
GTF2H3-211ENST00000543154 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
GTF2H3-211ENST00000543154 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
GTF2H3-211ENST00000543154 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
GTF2H3-211ENST00000543154 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
GTF2H3-211ENST00000543154 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
GTF2H3-211ENST00000543154 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms