RNA–Protein interactions for RNA: ENST00000542982.1

POLD4-212, Transcript of DNA polymerase delta 4, accessory subunit, humanhuman

TSL 1 (best)

Gene POLD4, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD4-212ENST00000542982 NISCHQ9Y2I1 1504 aa41.28■■■■■ 4.2
POLD4-212ENST00000542982 CCDC180Q9P1Z9 1646 aa37.22■■■■□ 3.55
POLD4-212ENST00000542982 ABCC9O60706 1549 aa36.94■■■■□ 3.5
POLD4-212ENST00000542982 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
POLD4-212ENST00000542982 NACADO15069 1562 aa34.99■■■■□ 3.19
POLD4-212ENST00000542982 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
POLD4-212ENST00000542982 MYO15BQ96JP2 1530 aa34.5■■■■□ 3.11
POLD4-212ENST00000542982 DCAF8L2P0C7V8 631 aa34.48■■■■□ 3.11
POLD4-212ENST00000542982 DNAJC5BQ9UF47 199 aa34.39■■■■□ 3.1
POLD4-212ENST00000542982 ZCCHC6Q5VYS8 1495 aaKnown RBP34.31■■■■□ 3.08
POLD4-212ENST00000542982 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
POLD4-212ENST00000542982 PABPN1Q86U42 306 aaKnown RBP eCLIP34.21■■■■□ 3.07
POLD4-212ENST00000542982 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
POLD4-212ENST00000542982 SCRIBQ14160 1630 aa33.87■■■■□ 3.01
POLD4-212ENST00000542982 SHROOM4Q9ULL8 1493 aa33.76■■■■□ 3
POLD4-212ENST00000542982 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
POLD4-212ENST00000542982 EIF4G1Q04637 1599 aaKnown RBP33.4■■■□□ 2.94
POLD4-212ENST00000542982 CECR2Q9BXF3 1484 aa33.24■■■□□ 2.91
POLD4-212ENST00000542982 SMARCA4P51532 1647 aa32.3■■■□□ 2.76
POLD4-212ENST00000542982 NCAPD3P42695 1498 aa32.2■■■□□ 2.75
POLD4-212ENST00000542982 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
POLD4-212ENST00000542982 HMGXB3Q12766 1538 aa32.14■■■□□ 2.74
POLD4-212ENST00000542982 SMARCA2P51531 1590 aa32.14■■■□□ 2.74
POLD4-212ENST00000542982 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
POLD4-212ENST00000542982 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
POLD4-212ENST00000542982 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
POLD4-212ENST00000542982 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
POLD4-212ENST00000542982 MROH2BQ7Z745 1585 aa31.84■■■□□ 2.69
POLD4-212ENST00000542982 CUX2O14529 1486 aa31.8■■■□□ 2.68
POLD4-212ENST00000542982 NESP48681 1621 aa31.78■■■□□ 2.68
POLD4-212ENST00000542982 THOC2Q8NI27 1593 aaKnown RBP31.62■■■□□ 2.65
POLD4-212ENST00000542982 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
POLD4-212ENST00000542982 KIF21AQ7Z4S6 1674 aa31.56■■■□□ 2.64
POLD4-212ENST00000542982 WIZO95785 1651 aa31.54■■■□□ 2.64
POLD4-212ENST00000542982 DNAJC5Q9H3Z4 198 aa31.46■■■□□ 2.63
POLD4-212ENST00000542982 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
POLD4-212ENST00000542982 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
POLD4-212ENST00000542982 TOP2AP11388 1531 aaKnown RBP31.13■■■□□ 2.57
POLD4-212ENST00000542982 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
POLD4-212ENST00000542982 WDR62O43379 1518 aa31.1■■■□□ 2.57
POLD4-212ENST00000542982 RSF1Q96T23 1441 aaPredicted RBP31.1■■■□□ 2.57
POLD4-212ENST00000542982 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.55
POLD4-212ENST00000542982 PRDM2Q13029 1718 aa30.97■■■□□ 2.55
POLD4-212ENST00000542982 FANCD2Q9BXW9 1451 aa30.94■■■□□ 2.54
POLD4-212ENST00000542982 CFTRP13569 1480 aa30.92■■■□□ 2.54
POLD4-212ENST00000542982 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
POLD4-212ENST00000542982 CCDC88BA6NC98 1476 aa30.63■■■□□ 2.49
POLD4-212ENST00000542982 TOPBP1Q92547 1522 aa30.4■■■□□ 2.46
POLD4-212ENST00000542982 DNMBPQ6XZF7 1577 aa30.35■■■□□ 2.45
POLD4-212ENST00000542982 IFT140Q96RY7 1462 aa30.32■■■□□ 2.44
POLD4-212ENST00000542982 EIF4G3O43432 1585 aaKnown RBP30.32■■■□□ 2.44
POLD4-212ENST00000542982 ZNF608Q9ULD9 1512 aaPredicted RBP30.31■■■□□ 2.44
POLD4-212ENST00000542982 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
POLD4-212ENST00000542982 TARBP1Q13395 1621 aaKnown RBP30.21■■■□□ 2.43
POLD4-212ENST00000542982 TRIM41Q8WV44 630 aa30.17■■■□□ 2.42
POLD4-212ENST00000542982 CHD1O14646 1710 aa30.12■■■□□ 2.41
POLD4-212ENST00000542982 POLA1P09884 1462 aaPredicted RBP30.09■■■□□ 2.41
POLD4-212ENST00000542982 OSCARQ8IYS5 282 aa30.09■■■□□ 2.41
POLD4-212ENST00000542982 RIMBP3CA6NJZ7 1639 aa30.07■■■□□ 2.4
POLD4-212ENST00000542982 RIMBP3BA6NNM3 1639 aa30.07■■■□□ 2.4
POLD4-212ENST00000542982 RIMBP3Q9UFD9 1639 aa30.07■■■□□ 2.4
POLD4-212ENST00000542982 AQRO60306 1485 aaKnown RBP eCLIP29.95■■■□□ 2.392e-8■■■■■ 82.8
POLD4-212ENST00000542982 CUX1P39880 1505 aa29.94■■■□□ 2.38
POLD4-212ENST00000542982 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
POLD4-212ENST00000542982 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
POLD4-212ENST00000542982 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
POLD4-212ENST00000542982 ARHGEF11O15085 1522 aa29.92■■■□□ 2.38
POLD4-212ENST00000542982 SOGA1O94964 1423 aa29.8■■■□□ 2.36
POLD4-212ENST00000542982 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
POLD4-212ENST00000542982 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
POLD4-212ENST00000542982 TDRD9Q8NDG6 1382 aaKnown RBP29.74■■■□□ 2.35
POLD4-212ENST00000542982 CLASP1Q7Z460 1538 aa29.67■■■□□ 2.34
POLD4-212ENST00000542982 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
POLD4-212ENST00000542982 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
POLD4-212ENST00000542982 ARAP1Q96P48 1450 aa29.64■■■□□ 2.34
POLD4-212ENST00000542982 GRIN2BQ13224 1484 aa29.62■■■□□ 2.33
POLD4-212ENST00000542982 SYNJ1O43426 1573 aa29.61■■■□□ 2.33
POLD4-212ENST00000542982 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
POLD4-212ENST00000542982 FBLN2P98095 1184 aa29.6■■■□□ 2.33
POLD4-212ENST00000542982 BIVM-ERCC5R4GMW8 1640 aa29.58■■■□□ 2.33
POLD4-212ENST00000542982 ABCA10Q8WWZ4 1543 aa29.55■■■□□ 2.32
POLD4-212ENST00000542982 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
POLD4-212ENST00000542982 GAPVD1Q14C86 1478 aa29.53■■■□□ 2.32
POLD4-212ENST00000542982 TOP2BQ02880 1626 aa29.49■■■□□ 2.31
POLD4-212ENST00000542982 ADAMTS12P58397 1594 aa29.44■■■□□ 2.3
POLD4-212ENST00000542982 CYB5RLQ6IPT4 315 aa29.42■■■□□ 2.3
POLD4-212ENST00000542982 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
POLD4-212ENST00000542982 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
POLD4-212ENST00000542982 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
POLD4-212ENST00000542982 CEP170Q5SW79 1584 aa29.29■■■□□ 2.28
POLD4-212ENST00000542982 ERCC6L2Q5T890 1561 aa29.21■■■□□ 2.27
POLD4-212ENST00000542982 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.27
POLD4-212ENST00000542982 SHROOM2Q13796 1616 aa29.18■■■□□ 2.26
POLD4-212ENST00000542982 NUP160Q12769 1436 aa29.17■■■□□ 2.26
POLD4-212ENST00000542982 FHAD1B1AJZ9 1412 aa29.13■■■□□ 2.25
POLD4-212ENST00000542982 TRHP20396 242 aaPredicted RBP29.07■■■□□ 2.24
POLD4-212ENST00000542982 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
POLD4-212ENST00000542982 CUL7Q14999 1698 aa28.91■■■□□ 2.22
POLD4-212ENST00000542982 PRG4Q92954 1404 aaPredicted RBP28.81■■■□□ 2.2
POLD4-212ENST00000542982 KIF13AQ9H1H9 1805 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms