RNA–Protein interactions for RNA: ENST00000542851.5

MAP3K4-212, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 2

Gene MAP3K4, Length 625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-212ENST00000542851 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
MAP3K4-212ENST00000542851 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
MAP3K4-212ENST00000542851 ABCC9O60706 1549 aa24.69■■□□□ 1.54
MAP3K4-212ENST00000542851 ZCCHC6Q5VYS8 1495 aaKnown RBP24.54■■□□□ 1.52
MAP3K4-212ENST00000542851 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
MAP3K4-212ENST00000542851 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
MAP3K4-212ENST00000542851 NACADO15069 1562 aa24.22■■□□□ 1.47
MAP3K4-212ENST00000542851 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
MAP3K4-212ENST00000542851 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
MAP3K4-212ENST00000542851 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
MAP3K4-212ENST00000542851 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
MAP3K4-212ENST00000542851 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
MAP3K4-212ENST00000542851 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
MAP3K4-212ENST00000542851 PABPN1Q86U42 306 aaKnown RBP eCLIP23.17■■□□□ 1.3
MAP3K4-212ENST00000542851 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
MAP3K4-212ENST00000542851 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
MAP3K4-212ENST00000542851 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
MAP3K4-212ENST00000542851 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
MAP3K4-212ENST00000542851 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
MAP3K4-212ENST00000542851 RSF1Q96T23 1441 aaPredicted RBP22.55■■□□□ 1.2
MAP3K4-212ENST00000542851 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
MAP3K4-212ENST00000542851 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
MAP3K4-212ENST00000542851 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
MAP3K4-212ENST00000542851 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
MAP3K4-212ENST00000542851 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
MAP3K4-212ENST00000542851 WIZO95785 1651 aa22.33■■□□□ 1.17
MAP3K4-212ENST00000542851 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
MAP3K4-212ENST00000542851 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
MAP3K4-212ENST00000542851 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
MAP3K4-212ENST00000542851 BAZ1BQ9UIG0 1483 aaKnown RBP22.21■■□□□ 1.15
MAP3K4-212ENST00000542851 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
MAP3K4-212ENST00000542851 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
MAP3K4-212ENST00000542851 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
MAP3K4-212ENST00000542851 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
MAP3K4-212ENST00000542851 CFTRP13569 1480 aa21.7■■□□□ 1.06
MAP3K4-212ENST00000542851 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
MAP3K4-212ENST00000542851 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
MAP3K4-212ENST00000542851 NESP48681 1621 aa21.53■■□□□ 1.04
MAP3K4-212ENST00000542851 PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
MAP3K4-212ENST00000542851 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
MAP3K4-212ENST00000542851 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
MAP3K4-212ENST00000542851 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
MAP3K4-212ENST00000542851 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
MAP3K4-212ENST00000542851 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
MAP3K4-212ENST00000542851 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
MAP3K4-212ENST00000542851 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
MAP3K4-212ENST00000542851 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
MAP3K4-212ENST00000542851 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.98
MAP3K4-212ENST00000542851 CUX1P39880 1505 aa21.14■□□□□ 0.98
MAP3K4-212ENST00000542851 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
MAP3K4-212ENST00000542851 TOP2BQ02880 1626 aa21.14■□□□□ 0.97
MAP3K4-212ENST00000542851 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
MAP3K4-212ENST00000542851 THOC2Q8NI27 1593 aaKnown RBP21.13■□□□□ 0.97
MAP3K4-212ENST00000542851 WDR62O43379 1518 aa21.13■□□□□ 0.97
MAP3K4-212ENST00000542851 TOPBP1Q92547 1522 aa21.13■□□□□ 0.97
MAP3K4-212ENST00000542851 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
MAP3K4-212ENST00000542851 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
MAP3K4-212ENST00000542851 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
MAP3K4-212ENST00000542851 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
MAP3K4-212ENST00000542851 CUX2O14529 1486 aa20.94■□□□□ 0.94
MAP3K4-212ENST00000542851 SOGA1O94964 1423 aa20.92■□□□□ 0.94
MAP3K4-212ENST00000542851 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
MAP3K4-212ENST00000542851 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
MAP3K4-212ENST00000542851 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
MAP3K4-212ENST00000542851 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
MAP3K4-212ENST00000542851 WDR97A6NE52 1622 aa20.81■□□□□ 0.92
MAP3K4-212ENST00000542851 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
MAP3K4-212ENST00000542851 EEA1Q15075 1411 aa20.75■□□□□ 0.91
MAP3K4-212ENST00000542851 ABCA5Q8WWZ7 1642 aa20.7■□□□□ 0.9
MAP3K4-212ENST00000542851 TDRD9Q8NDG6 1382 aaKnown RBP20.7■□□□□ 0.9
MAP3K4-212ENST00000542851 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
MAP3K4-212ENST00000542851 GAPVD1Q14C86 1478 aa20.68■□□□□ 0.9
MAP3K4-212ENST00000542851 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
MAP3K4-212ENST00000542851 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.9
MAP3K4-212ENST00000542851 IGF1RP08069 1367 aa20.64■□□□□ 0.89
MAP3K4-212ENST00000542851 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
MAP3K4-212ENST00000542851 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
MAP3K4-212ENST00000542851 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
MAP3K4-212ENST00000542851 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
MAP3K4-212ENST00000542851 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
MAP3K4-212ENST00000542851 CUL7Q14999 1698 aa20.52■□□□□ 0.88
MAP3K4-212ENST00000542851 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
MAP3K4-212ENST00000542851 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
MAP3K4-212ENST00000542851 CARMIL1Q5VZK9 1371 aa20.5■□□□□ 0.87
MAP3K4-212ENST00000542851 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
MAP3K4-212ENST00000542851 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
MAP3K4-212ENST00000542851 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
MAP3K4-212ENST00000542851 KIF21BO75037 1637 aa20.45■□□□□ 0.86
MAP3K4-212ENST00000542851 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
MAP3K4-212ENST00000542851 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
MAP3K4-212ENST00000542851 RAPGEF2Q9Y4G8 1499 aa20.43■□□□□ 0.86
MAP3K4-212ENST00000542851 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
MAP3K4-212ENST00000542851 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
MAP3K4-212ENST00000542851 GRIN2AQ12879 1464 aa20.34■□□□□ 0.85
MAP3K4-212ENST00000542851 CHD1O14646 1710 aa20.26■□□□□ 0.83
MAP3K4-212ENST00000542851 NUP160Q12769 1436 aa20.26■□□□□ 0.83
MAP3K4-212ENST00000542851 FBLN2P98095 1184 aa20.25■□□□□ 0.83
MAP3K4-212ENST00000542851 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
MAP3K4-212ENST00000542851 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
MAP3K4-212ENST00000542851 UBTFP17480 764 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms