RNA–Protein interactions for RNA: ENST00000542822.5

HMBS-215, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-215ENST00000542822 NISCHQ9Y2I1 1504 aa47.4■■■■■ 5.18
HMBS-215ENST00000542822 CCDC180Q9P1Z9 1646 aa42.05■■■■■ 4.32
HMBS-215ENST00000542822 ABCC9O60706 1549 aa41.48■■■■■ 4.23
HMBS-215ENST00000542822 ZCCHC6Q5VYS8 1495 aaKnown RBP39.52■■■■□ 3.92
HMBS-215ENST00000542822 NACADO15069 1562 aa39.5■■■■□ 3.91
HMBS-215ENST00000542822 RB1CC1Q8TDY2 1594 aa39.47■■■■□ 3.91
HMBS-215ENST00000542822 DCAF8L2P0C7V8 631 aa39.46■■■■□ 3.91
HMBS-215ENST00000542822 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
HMBS-215ENST00000542822 MYO15BQ96JP2 1530 aa39.38■■■■□ 3.89
HMBS-215ENST00000542822 DCAF1Q9Y4B6 1507 aa39.29■■■■□ 3.88
HMBS-215ENST00000542822 PABPN1Q86U42 306 aaKnown RBP eCLIP38.64■■■■□ 3.78
HMBS-215ENST00000542822 UNC13AQ9UPW8 1703 aa38.55■■■■□ 3.76
HMBS-215ENST00000542822 SCRIBQ14160 1630 aa38.31■■■■□ 3.72
HMBS-215ENST00000542822 BICRAQ9NZM4 1560 aa38.25■■■■□ 3.71
HMBS-215ENST00000542822 SHROOM4Q9ULL8 1493 aa37.94■■■■□ 3.66
HMBS-215ENST00000542822 CECR2Q9BXF3 1484 aa37.43■■■■□ 3.58
HMBS-215ENST00000542822 CC2D2AQ9P2K1 1620 aa37.38■■■■□ 3.57
HMBS-215ENST00000542822 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
HMBS-215ENST00000542822 BAZ1AQ9NRL2 1556 aaPredicted RBP36.73■■■■□ 3.47
HMBS-215ENST00000542822 SMARCA4P51532 1647 aa36.71■■■■□ 3.47
HMBS-215ENST00000542822 DNAJC5Q9H3Z4 198 aa36.57■■■■□ 3.44
HMBS-215ENST00000542822 MROH2BQ7Z745 1585 aa36.51■■■■□ 3.44
HMBS-215ENST00000542822 ATAD2BQ9ULI0 1458 aa36.48■■■■□ 3.43
HMBS-215ENST00000542822 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
HMBS-215ENST00000542822 SMARCA2P51531 1590 aa36.45■■■■□ 3.43
HMBS-215ENST00000542822 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
HMBS-215ENST00000542822 HMGXB3Q12766 1538 aa36.28■■■■□ 3.4
HMBS-215ENST00000542822 RSF1Q96T23 1441 aaPredicted RBP36.2■■■■□ 3.39
HMBS-215ENST00000542822 BAZ1BQ9UIG0 1483 aaKnown RBP36.18■■■■□ 3.38
HMBS-215ENST00000542822 WIZO95785 1651 aa36.11■■■■□ 3.37
HMBS-215ENST00000542822 CUX2O14529 1486 aa35.95■■■■□ 3.35
HMBS-215ENST00000542822 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
HMBS-215ENST00000542822 TOP2AP11388 1531 aaKnown RBP35.77■■■■□ 3.32
HMBS-215ENST00000542822 NESP48681 1621 aa35.47■■■■□ 3.27
HMBS-215ENST00000542822 LAMC3Q9Y6N6 1575 aa35.44■■■■□ 3.26
HMBS-215ENST00000542822 SUPT5HO00267 1087 aaKnown RBP35.4■■■■□ 3.26
HMBS-215ENST00000542822 CADPSQ9ULU8 1353 aa35.39■■■■□ 3.26
HMBS-215ENST00000542822 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
HMBS-215ENST00000542822 CFTRP13569 1480 aa35.22■■■■□ 3.23
HMBS-215ENST00000542822 PDS5BQ9NTI5 1447 aa35.21■■■■□ 3.23
HMBS-215ENST00000542822 THOC2Q8NI27 1593 aaKnown RBP35.11■■■■□ 3.21
HMBS-215ENST00000542822 KIF21AQ7Z4S6 1674 aa35.02■■■■□ 3.2
HMBS-215ENST00000542822 PRDM2Q13029 1718 aa34.96■■■■□ 3.19
HMBS-215ENST00000542822 FANCD2Q9BXW9 1451 aa34.96■■■■□ 3.19
HMBS-215ENST00000542822 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
HMBS-215ENST00000542822 MRC2Q9UBG0 1479 aa34.8■■■■□ 3.16
HMBS-215ENST00000542822 TRIM41Q8WV44 630 aa34.77■■■■□ 3.16
HMBS-215ENST00000542822 WDR62O43379 1518 aa34.68■■■■□ 3.14
HMBS-215ENST00000542822 URB2Q14146 1524 aaKnown RBP34.58■■■■□ 3.13
HMBS-215ENST00000542822 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
HMBS-215ENST00000542822 TOPBP1Q92547 1522 aa34.43■■■■□ 3.1
HMBS-215ENST00000542822 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
HMBS-215ENST00000542822 OSCARQ8IYS5 282 aa34.35■■■■□ 3.09
HMBS-215ENST00000542822 CUX1P39880 1505 aa34.24■■■■□ 3.07
HMBS-215ENST00000542822 IFT140Q96RY7 1462 aa34.17■■■■□ 3.06
HMBS-215ENST00000542822 POLA1P09884 1462 aaPredicted RBP34.14■■■■□ 3.06
HMBS-215ENST00000542822 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
HMBS-215ENST00000542822 FGD5Q6ZNL6 1462 aa34.08■■■■□ 3.05
HMBS-215ENST00000542822 TARBP1Q13395 1621 aaKnown RBP34.04■■■■□ 3.04
HMBS-215ENST00000542822 SOGA1O94964 1423 aa34.03■■■■□ 3.04
HMBS-215ENST00000542822 TOP2BQ02880 1626 aa34.02■■■■□ 3.04
HMBS-215ENST00000542822 BIVM-ERCC5R4GMW8 1640 aa34.01■■■■□ 3.04
HMBS-215ENST00000542822 SYNJ1O43426 1573 aa33.98■■■■□ 3.03
HMBS-215ENST00000542822 RAD54L2Q9Y4B4 1467 aa33.97■■■■□ 3.03
HMBS-215ENST00000542822 ZNF608Q9ULD9 1512 aaPredicted RBP33.95■■■■□ 3.03
HMBS-215ENST00000542822 WDR97A6NE52 1622 aa33.82■■■■□ 3.01
HMBS-215ENST00000542822 EIF4G3O43432 1585 aaKnown RBP33.82■■■■□ 3
HMBS-215ENST00000542822 AQRO60306 1485 aaKnown RBP eCLIP33.81■■■■□ 32e-8■■■■■ 29.8
HMBS-215ENST00000542822 ABCA10Q8WWZ4 1543 aa33.8■■■■□ 3
HMBS-215ENST00000542822 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
HMBS-215ENST00000542822 RIMBP3CA6NJZ7 1639 aa33.74■■■□□ 2.99
HMBS-215ENST00000542822 RIMBP3BA6NNM3 1639 aa33.74■■■□□ 2.99
HMBS-215ENST00000542822 RIMBP3Q9UFD9 1639 aa33.74■■■□□ 2.99
HMBS-215ENST00000542822 ARHGEF11O15085 1522 aa33.65■■■□□ 2.98
HMBS-215ENST00000542822 GAPVD1Q14C86 1478 aa33.63■■■□□ 2.97
HMBS-215ENST00000542822 ABCA5Q8WWZ7 1642 aa33.62■■■□□ 2.97
HMBS-215ENST00000542822 GRIN2BQ13224 1484 aa33.61■■■□□ 2.97
HMBS-215ENST00000542822 CYB5RLQ6IPT4 315 aa33.57■■■□□ 2.96
HMBS-215ENST00000542822 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
HMBS-215ENST00000542822 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
HMBS-215ENST00000542822 SNAPC4Q5SXM2 1469 aa33.49■■■□□ 2.95
HMBS-215ENST00000542822 FBLN2P98095 1184 aa33.44■■■□□ 2.94
HMBS-215ENST00000542822 ERICH3Q5RHP9 1530 aa33.4■■■□□ 2.94
HMBS-215ENST00000542822 KIF27Q86VH2 1401 aa33.4■■■□□ 2.94
HMBS-215ENST00000542822 TRHP20396 242 aaPredicted RBP33.37■■■□□ 2.93
HMBS-215ENST00000542822 SYNJ2O15056 1496 aa33.36■■■□□ 2.93
HMBS-215ENST00000542822 CHD1O14646 1710 aa33.36■■■□□ 2.93
HMBS-215ENST00000542822 CHMP7Q8WUX9 453 aaPredicted RBP33.33■■■□□ 2.93
HMBS-215ENST00000542822 ARAP1Q96P48 1450 aa33.29■■■□□ 2.92
HMBS-215ENST00000542822 ADAMTS12P58397 1594 aa33.27■■■□□ 2.92
HMBS-215ENST00000542822 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
HMBS-215ENST00000542822 IGF1RP08069 1367 aa33.25■■■□□ 2.91
HMBS-215ENST00000542822 CHIC1Q5VXU3 224 aa33.22■■■□□ 2.91
HMBS-215ENST00000542822 GRIN2AQ12879 1464 aa33.16■■■□□ 2.9
HMBS-215ENST00000542822 CUL7Q14999 1698 aa33.13■■■□□ 2.89
HMBS-215ENST00000542822 RUSC2Q8N2Y8 1516 aa33.12■■■□□ 2.89
HMBS-215ENST00000542822 CARMIL1Q5VZK9 1371 aa33.05■■■□□ 2.88
HMBS-215ENST00000542822 CLASP1Q7Z460 1538 aa33.03■■■□□ 2.88
HMBS-215ENST00000542822 NUP160Q12769 1436 aa33.02■■■□□ 2.88
HMBS-215ENST00000542822 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms