RNA–Protein interactions for RNA: ENST00000542438.1

RNF10-216, Transcript of ring finger protein 10, humanhuman

TSL 4

Gene RNF10, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF10-216ENST00000542438 NISCHQ9Y2I1 1504 aa32.9■■■□□ 2.86
RNF10-216ENST00000542438 CCDC180Q9P1Z9 1646 aa29.3■■■□□ 2.28
RNF10-216ENST00000542438 ABCC9O60706 1549 aa28.48■■■□□ 2.15
RNF10-216ENST00000542438 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
RNF10-216ENST00000542438 NACADO15069 1562 aa27.5■■□□□ 1.99
RNF10-216ENST00000542438 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
RNF10-216ENST00000542438 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
RNF10-216ENST00000542438 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
RNF10-216ENST00000542438 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.96
RNF10-216ENST00000542438 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
RNF10-216ENST00000542438 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
RNF10-216ENST00000542438 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
RNF10-216ENST00000542438 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
RNF10-216ENST00000542438 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
RNF10-216ENST00000542438 DNAJC5BQ9UF47 199 aa26.02■■□□□ 1.76
RNF10-216ENST00000542438 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
RNF10-216ENST00000542438 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
RNF10-216ENST00000542438 CECR2Q9BXF3 1484 aa25.61■■□□□ 1.69
RNF10-216ENST00000542438 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
RNF10-216ENST00000542438 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
RNF10-216ENST00000542438 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
RNF10-216ENST00000542438 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
RNF10-216ENST00000542438 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
RNF10-216ENST00000542438 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
RNF10-216ENST00000542438 PEG3Q9GZU2 1588 aa25.3■■□□□ 1.64
RNF10-216ENST00000542438 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
RNF10-216ENST00000542438 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
RNF10-216ENST00000542438 WIZO95785 1651 aa25.1■■□□□ 1.61
RNF10-216ENST00000542438 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
RNF10-216ENST00000542438 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
RNF10-216ENST00000542438 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
RNF10-216ENST00000542438 NESP48681 1621 aa24.66■■□□□ 1.54
RNF10-216ENST00000542438 CADPSQ9ULU8 1353 aa24.59■■□□□ 1.53
RNF10-216ENST00000542438 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
RNF10-216ENST00000542438 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
RNF10-216ENST00000542438 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
RNF10-216ENST00000542438 CFTRP13569 1480 aa24.46■■□□□ 1.51
RNF10-216ENST00000542438 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
RNF10-216ENST00000542438 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
RNF10-216ENST00000542438 PRDM2Q13029 1718 aa24.41■■□□□ 1.5
RNF10-216ENST00000542438 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
RNF10-216ENST00000542438 CUX2O14529 1486 aa24.32■■□□□ 1.48
RNF10-216ENST00000542438 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
RNF10-216ENST00000542438 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
RNF10-216ENST00000542438 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
RNF10-216ENST00000542438 WDR62O43379 1518 aa24.17■■□□□ 1.46
RNF10-216ENST00000542438 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
RNF10-216ENST00000542438 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
RNF10-216ENST00000542438 DNMBPQ6XZF7 1577 aa23.94■■□□□ 1.42
RNF10-216ENST00000542438 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
RNF10-216ENST00000542438 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
RNF10-216ENST00000542438 CUX1P39880 1505 aa23.77■■□□□ 1.4
RNF10-216ENST00000542438 POLA1P09884 1462 aaPredicted RBP23.73■■□□□ 1.39
RNF10-216ENST00000542438 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
RNF10-216ENST00000542438 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
RNF10-216ENST00000542438 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
RNF10-216ENST00000542438 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.38
RNF10-216ENST00000542438 SOGA1O94964 1423 aa23.63■■□□□ 1.37
RNF10-216ENST00000542438 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
RNF10-216ENST00000542438 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
RNF10-216ENST00000542438 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
RNF10-216ENST00000542438 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
RNF10-216ENST00000542438 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
RNF10-216ENST00000542438 WDR97A6NE52 1622 aa23.57■■□□□ 1.36
RNF10-216ENST00000542438 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.353e-6■■■■□ 24.7
RNF10-216ENST00000542438 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
RNF10-216ENST00000542438 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
RNF10-216ENST00000542438 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
RNF10-216ENST00000542438 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
RNF10-216ENST00000542438 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
RNF10-216ENST00000542438 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
RNF10-216ENST00000542438 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
RNF10-216ENST00000542438 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
RNF10-216ENST00000542438 CHD1O14646 1710 aa23.3■■□□□ 1.32
RNF10-216ENST00000542438 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
RNF10-216ENST00000542438 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
RNF10-216ENST00000542438 ERICH3Q5RHP9 1530 aa23.22■■□□□ 1.31
RNF10-216ENST00000542438 SYNJ2O15056 1496 aa23.21■■□□□ 1.31
RNF10-216ENST00000542438 FBLN2P98095 1184 aa23.2■■□□□ 1.3
RNF10-216ENST00000542438 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
RNF10-216ENST00000542438 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
RNF10-216ENST00000542438 ADAMTS12P58397 1594 aa23.16■■□□□ 1.3
RNF10-216ENST00000542438 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
RNF10-216ENST00000542438 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
RNF10-216ENST00000542438 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
RNF10-216ENST00000542438 CUL7Q14999 1698 aa23.05■■□□□ 1.28
RNF10-216ENST00000542438 IGF1RP08069 1367 aa23.02■■□□□ 1.28
RNF10-216ENST00000542438 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
RNF10-216ENST00000542438 NUP160Q12769 1436 aa22.95■■□□□ 1.26
RNF10-216ENST00000542438 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
RNF10-216ENST00000542438 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
RNF10-216ENST00000542438 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
RNF10-216ENST00000542438 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
RNF10-216ENST00000542438 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
RNF10-216ENST00000542438 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
RNF10-216ENST00000542438 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
RNF10-216ENST00000542438 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
RNF10-216ENST00000542438 RAPGEF2Q9Y4G8 1499 aa22.8■■□□□ 1.24
RNF10-216ENST00000542438 SHROOM2Q13796 1616 aa22.8■■□□□ 1.24
RNF10-216ENST00000542438 EEA1Q15075 1411 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms