RNA–Protein interactions for RNA: ENST00000541649.1

SLC3A2-218, Transcript of solute carrier family 3 member 2, humanhuman

TSL 3

Gene SLC3A2, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-218ENST00000541649 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
SLC3A2-218ENST00000541649 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
SLC3A2-218ENST00000541649 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
SLC3A2-218ENST00000541649 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
SLC3A2-218ENST00000541649 FOXD1Q16676 465 aa18.03■□□□□ 0.48
SLC3A2-218ENST00000541649 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
SLC3A2-218ENST00000541649 MSH5O43196 834 aa17.12■□□□□ 0.33
SLC3A2-218ENST00000541649 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
SLC3A2-218ENST00000541649 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
SLC3A2-218ENST00000541649 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
SLC3A2-218ENST00000541649 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
SLC3A2-218ENST00000541649 ADRA2BP18089 450 aa16.59■□□□□ 0.25
SLC3A2-218ENST00000541649 ABCC9O60706 1549 aa15.87■□□□□ 0.13
SLC3A2-218ENST00000541649 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
SLC3A2-218ENST00000541649 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
SLC3A2-218ENST00000541649 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.04
SLC3A2-218ENST00000541649 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
SLC3A2-218ENST00000541649 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
SLC3A2-218ENST00000541649 NACADO15069 1562 aa15.07■□□□□ 0
SLC3A2-218ENST00000541649 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
SLC3A2-218ENST00000541649 MYO15BQ96JP2 1530 aa14.98□□□□□ -0.01
SLC3A2-218ENST00000541649 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
SLC3A2-218ENST00000541649 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
SLC3A2-218ENST00000541649 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
SLC3A2-218ENST00000541649 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
SLC3A2-218ENST00000541649 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
SLC3A2-218ENST00000541649 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
SLC3A2-218ENST00000541649 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
SLC3A2-218ENST00000541649 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
SLC3A2-218ENST00000541649 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
SLC3A2-218ENST00000541649 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
SLC3A2-218ENST00000541649 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
SLC3A2-218ENST00000541649 UNC13AQ9UPW8 1703 aa14.56□□□□□ -0.08
SLC3A2-218ENST00000541649 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
SLC3A2-218ENST00000541649 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
SLC3A2-218ENST00000541649 SCRIBQ14160 1630 aa14.42□□□□□ -0.1
SLC3A2-218ENST00000541649 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
SLC3A2-218ENST00000541649 CECR2Q9BXF3 1484 aa14.33□□□□□ -0.12
SLC3A2-218ENST00000541649 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
SLC3A2-218ENST00000541649 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
SLC3A2-218ENST00000541649 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
SLC3A2-218ENST00000541649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.162e-10■■■■■ 27.4
SLC3A2-218ENST00000541649 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
SLC3A2-218ENST00000541649 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
SLC3A2-218ENST00000541649 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
SLC3A2-218ENST00000541649 SMARCA2P51531 1590 aa13.83□□□□□ -0.19
SLC3A2-218ENST00000541649 HMGXB3Q12766 1538 aa13.81□□□□□ -0.2
SLC3A2-218ENST00000541649 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
SLC3A2-218ENST00000541649 SMARCA4P51532 1647 aa13.81□□□□□ -0.2
SLC3A2-218ENST00000541649 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
SLC3A2-218ENST00000541649 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
SLC3A2-218ENST00000541649 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
SLC3A2-218ENST00000541649 CUX2O14529 1486 aa13.73□□□□□ -0.21
SLC3A2-218ENST00000541649 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
SLC3A2-218ENST00000541649 MROH2BQ7Z745 1585 aa13.69□□□□□ -0.22
SLC3A2-218ENST00000541649 NESP48681 1621 aa13.64□□□□□ -0.23
SLC3A2-218ENST00000541649 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
SLC3A2-218ENST00000541649 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
SLC3A2-218ENST00000541649 CAPN15O75808 1086 aa13.57□□□□□ -0.24
SLC3A2-218ENST00000541649 LAMC3Q9Y6N6 1575 aa13.57□□□□□ -0.24
SLC3A2-218ENST00000541649 CADPSQ9ULU8 1353 aa13.57□□□□□ -0.24
SLC3A2-218ENST00000541649 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
SLC3A2-218ENST00000541649 DSG3P32926 999 aa13.48□□□□□ -0.25
SLC3A2-218ENST00000541649 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
SLC3A2-218ENST00000541649 APLP2Q06481 763 aa13.45□□□□□ -0.26
SLC3A2-218ENST00000541649 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
SLC3A2-218ENST00000541649 WIZO95785 1651 aa13.43□□□□□ -0.26
SLC3A2-218ENST00000541649 CFTRP13569 1480 aa13.41□□□□□ -0.26
SLC3A2-218ENST00000541649 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
SLC3A2-218ENST00000541649 KCNA4P22459 653 aa13.39□□□□□ -0.27
SLC3A2-218ENST00000541649 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
SLC3A2-218ENST00000541649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
SLC3A2-218ENST00000541649 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
SLC3A2-218ENST00000541649 FANCD2Q9BXW9 1451 aa13.35□□□□□ -0.27
SLC3A2-218ENST00000541649 WDR62O43379 1518 aa13.34□□□□□ -0.27
SLC3A2-218ENST00000541649 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
SLC3A2-218ENST00000541649 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
SLC3A2-218ENST00000541649 POTEHQ6S545 545 aa13.31□□□□□ -0.28
SLC3A2-218ENST00000541649 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
SLC3A2-218ENST00000541649 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
SLC3A2-218ENST00000541649 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
SLC3A2-218ENST00000541649 CCDC88BA6NC98 1476 aa13.24□□□□□ -0.29
SLC3A2-218ENST00000541649 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
SLC3A2-218ENST00000541649 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
SLC3A2-218ENST00000541649 ABCB7O75027 752 aa13.16□□□□□ -0.3
SLC3A2-218ENST00000541649 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
SLC3A2-218ENST00000541649 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
SLC3A2-218ENST00000541649 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
SLC3A2-218ENST00000541649 TOPBP1Q92547 1522 aa13.08□□□□□ -0.31
SLC3A2-218ENST00000541649 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
SLC3A2-218ENST00000541649 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
SLC3A2-218ENST00000541649 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
SLC3A2-218ENST00000541649 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
SLC3A2-218ENST00000541649 PRDM2Q13029 1718 aa12.98□□□□□ -0.33
SLC3A2-218ENST00000541649 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
SLC3A2-218ENST00000541649 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
SLC3A2-218ENST00000541649 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.343e-9■■■■■ 27.8
SLC3A2-218ENST00000541649 SOGA1O94964 1423 aa12.94□□□□□ -0.34
SLC3A2-218ENST00000541649 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
SLC3A2-218ENST00000541649 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms