RNA–Protein interactions for RNA: ENST00000541645.1

UBC-210, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-210ENST00000541645 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.52
UBC-210ENST00000541645 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
UBC-210ENST00000541645 ABCC9O60706 1549 aa37.48■■■■□ 3.59
UBC-210ENST00000541645 NACADO15069 1562 aa36.15■■■■□ 3.38
UBC-210ENST00000541645 RB1CC1Q8TDY2 1594 aa36.14■■■■□ 3.38
UBC-210ENST00000541645 ZCCHC6Q5VYS8 1495 aaKnown RBP36.11■■■■□ 3.37
UBC-210ENST00000541645 DCAF8L2P0C7V8 631 aa36.1■■■■□ 3.37
UBC-210ENST00000541645 MYO15BQ96JP2 1530 aa36.06■■■■□ 3.36
UBC-210ENST00000541645 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
UBC-210ENST00000541645 UNC13AQ9UPW8 1703 aa35.15■■■■□ 3.22
UBC-210ENST00000541645 PABPN1Q86U42 306 aaKnown RBP eCLIP35.07■■■■□ 3.2
UBC-210ENST00000541645 BICRAQ9NZM4 1560 aa35.02■■■■□ 3.2
UBC-210ENST00000541645 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
UBC-210ENST00000541645 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
UBC-210ENST00000541645 DNAJC5BQ9UF47 199 aa34.37■■■■□ 3.09
UBC-210ENST00000541645 EIF4G1Q04637 1599 aaKnown RBP34.1■■■■□ 3.05
UBC-210ENST00000541645 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
UBC-210ENST00000541645 CECR2Q9BXF3 1484 aa33.71■■■□□ 2.99
UBC-210ENST00000541645 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
UBC-210ENST00000541645 SMARCA4P51532 1647 aa33.53■■■□□ 2.96
UBC-210ENST00000541645 NCAPD3P42695 1498 aa33.41■■■□□ 2.94
UBC-210ENST00000541645 ATAD2BQ9ULI0 1458 aa33.39■■■□□ 2.94
UBC-210ENST00000541645 SMARCA2P51531 1590 aa33.35■■■□□ 2.93
UBC-210ENST00000541645 MROH2BQ7Z745 1585 aa33.35■■■□□ 2.93
UBC-210ENST00000541645 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
UBC-210ENST00000541645 HMGXB3Q12766 1538 aa33.2■■■□□ 2.91
UBC-210ENST00000541645 BAZ1BQ9UIG0 1483 aaKnown RBP33.1■■■□□ 2.89
UBC-210ENST00000541645 RSF1Q96T23 1441 aaPredicted RBP33.06■■■□□ 2.88
UBC-210ENST00000541645 WIZO95785 1651 aa32.92■■■□□ 2.86
UBC-210ENST00000541645 TOP2AP11388 1531 aaKnown RBP32.67■■■□□ 2.82
UBC-210ENST00000541645 NESP48681 1621 aa32.46■■■□□ 2.79
UBC-210ENST00000541645 LAMC3Q9Y6N6 1575 aa32.44■■■□□ 2.78
UBC-210ENST00000541645 CADPSQ9ULU8 1353 aa32.43■■■□□ 2.78
UBC-210ENST00000541645 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
UBC-210ENST00000541645 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
UBC-210ENST00000541645 PDS5BQ9NTI5 1447 aa32.27■■■□□ 2.76
UBC-210ENST00000541645 CFTRP13569 1480 aa32.25■■■□□ 2.75
UBC-210ENST00000541645 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
UBC-210ENST00000541645 CUX2O14529 1486 aa32■■■□□ 2.71
UBC-210ENST00000541645 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
UBC-210ENST00000541645 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
UBC-210ENST00000541645 CEP164Q9UPV0 1460 aa31.95■■■□□ 2.7
UBC-210ENST00000541645 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
UBC-210ENST00000541645 MRC2Q9UBG0 1479 aa31.89■■■□□ 2.7
UBC-210ENST00000541645 PRDM2Q13029 1718 aa31.82■■■□□ 2.68
UBC-210ENST00000541645 WDR62O43379 1518 aa31.78■■■□□ 2.68
UBC-210ENST00000541645 URB2Q14146 1524 aaKnown RBP31.66■■■□□ 2.66
UBC-210ENST00000541645 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
UBC-210ENST00000541645 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
UBC-210ENST00000541645 DNMBPQ6XZF7 1577 aa31.46■■■□□ 2.63
UBC-210ENST00000541645 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
UBC-210ENST00000541645 CUX1P39880 1505 aa31.28■■■□□ 2.6
UBC-210ENST00000541645 POLA1P09884 1462 aaPredicted RBP31.24■■■□□ 2.59
UBC-210ENST00000541645 FGD5Q6ZNL6 1462 aa31.16■■■□□ 2.58
UBC-210ENST00000541645 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
UBC-210ENST00000541645 SOGA1O94964 1423 aa31.14■■■□□ 2.58
UBC-210ENST00000541645 TARBP1Q13395 1621 aaKnown RBP31.12■■■□□ 2.57
UBC-210ENST00000541645 ZNF608Q9ULD9 1512 aaPredicted RBP31.1■■■□□ 2.57
UBC-210ENST00000541645 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
UBC-210ENST00000541645 TOP2BQ02880 1626 aa31.05■■■□□ 2.56
UBC-210ENST00000541645 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
UBC-210ENST00000541645 SYNJ1O43426 1573 aa31■■■□□ 2.55
UBC-210ENST00000541645 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.558e-18■■■■■ 28.7
UBC-210ENST00000541645 EIF4G3O43432 1585 aaKnown RBP30.95■■■□□ 2.54
UBC-210ENST00000541645 DNAJC5Q9H3Z4 198 aa30.94■■■□□ 2.54
UBC-210ENST00000541645 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
UBC-210ENST00000541645 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
UBC-210ENST00000541645 ABCA10Q8WWZ4 1543 aa30.91■■■□□ 2.54
UBC-210ENST00000541645 GRIN2BQ13224 1484 aa30.76■■■□□ 2.52
UBC-210ENST00000541645 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.52
UBC-210ENST00000541645 OSCARQ8IYS5 282 aa30.73■■■□□ 2.51
UBC-210ENST00000541645 ABCA5Q8WWZ7 1642 aa30.71■■■□□ 2.51
UBC-210ENST00000541645 MAGI1Q96QZ7 1491 aaPredicted RBP30.68■■■□□ 2.5
UBC-210ENST00000541645 SNAPC4Q5SXM2 1469 aa30.66■■■□□ 2.5
UBC-210ENST00000541645 FBLN2P98095 1184 aa30.56■■■□□ 2.48
UBC-210ENST00000541645 SYNJ2O15056 1496 aa30.56■■■□□ 2.48
UBC-210ENST00000541645 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
UBC-210ENST00000541645 CHMP7Q8WUX9 453 aaPredicted RBP30.55■■■□□ 2.48
UBC-210ENST00000541645 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
UBC-210ENST00000541645 KIF27Q86VH2 1401 aa30.51■■■□□ 2.47
UBC-210ENST00000541645 TRIM41Q8WV44 630 aa30.5■■■□□ 2.47
UBC-210ENST00000541645 CHD1O14646 1710 aa30.46■■■□□ 2.47
UBC-210ENST00000541645 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.46
UBC-210ENST00000541645 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
UBC-210ENST00000541645 IGF1RP08069 1367 aa30.41■■■□□ 2.46
UBC-210ENST00000541645 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
UBC-210ENST00000541645 CLASP1Q7Z460 1538 aa30.26■■■□□ 2.43
UBC-210ENST00000541645 NUP160Q12769 1436 aa30.24■■■□□ 2.43
UBC-210ENST00000541645 CUL7Q14999 1698 aa30.22■■■□□ 2.43
UBC-210ENST00000541645 CARMIL1Q5VZK9 1371 aa30.2■■■□□ 2.43
UBC-210ENST00000541645 RUSC2Q8N2Y8 1516 aa30.19■■■□□ 2.42
UBC-210ENST00000541645 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
UBC-210ENST00000541645 ARHGEF11O15085 1522 aa30.15■■■□□ 2.42
UBC-210ENST00000541645 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
UBC-210ENST00000541645 RIMBP3CA6NJZ7 1639 aa30.08■■■□□ 2.41
UBC-210ENST00000541645 RIMBP3BA6NNM3 1639 aa30.08■■■□□ 2.41
UBC-210ENST00000541645 RIMBP3Q9UFD9 1639 aa30.08■■■□□ 2.41
UBC-210ENST00000541645 EEA1Q15075 1411 aa30.03■■■□□ 2.4
UBC-210ENST00000541645 RAPGEF2Q9Y4G8 1499 aa30.02■■■□□ 2.4
UBC-210ENST00000541645 KIAA0586Q9BVV6 1533 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms