RNA–Protein interactions for RNA: ENST00000541425.5

SLC3A2-217, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-217ENST00000541425 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
SLC3A2-217ENST00000541425 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
SLC3A2-217ENST00000541425 ABCC9O60706 1549 aa22.8■■□□□ 1.24
SLC3A2-217ENST00000541425 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
SLC3A2-217ENST00000541425 RB1CC1Q8TDY2 1594 aa21.97■■□□□ 1.11
SLC3A2-217ENST00000541425 NACADO15069 1562 aa21.93■■□□□ 1.1
SLC3A2-217ENST00000541425 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
SLC3A2-217ENST00000541425 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
SLC3A2-217ENST00000541425 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
SLC3A2-217ENST00000541425 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
SLC3A2-217ENST00000541425 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
SLC3A2-217ENST00000541425 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
SLC3A2-217ENST00000541425 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
SLC3A2-217ENST00000541425 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
SLC3A2-217ENST00000541425 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
SLC3A2-217ENST00000541425 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
SLC3A2-217ENST00000541425 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
SLC3A2-217ENST00000541425 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
SLC3A2-217ENST00000541425 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
SLC3A2-217ENST00000541425 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
SLC3A2-217ENST00000541425 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
SLC3A2-217ENST00000541425 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
SLC3A2-217ENST00000541425 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
SLC3A2-217ENST00000541425 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
SLC3A2-217ENST00000541425 PEG3Q9GZU2 1588 aa20.16■□□□□ 0.82
SLC3A2-217ENST00000541425 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
SLC3A2-217ENST00000541425 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
SLC3A2-217ENST00000541425 WIZO95785 1651 aa20.11■□□□□ 0.81
SLC3A2-217ENST00000541425 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
SLC3A2-217ENST00000541425 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
SLC3A2-217ENST00000541425 NESP48681 1621 aa19.73■□□□□ 0.75
SLC3A2-217ENST00000541425 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
SLC3A2-217ENST00000541425 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
SLC3A2-217ENST00000541425 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
SLC3A2-217ENST00000541425 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
SLC3A2-217ENST00000541425 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
SLC3A2-217ENST00000541425 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
SLC3A2-217ENST00000541425 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
SLC3A2-217ENST00000541425 CFTRP13569 1480 aa19.52■□□□□ 0.72
SLC3A2-217ENST00000541425 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
SLC3A2-217ENST00000541425 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
SLC3A2-217ENST00000541425 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
SLC3A2-217ENST00000541425 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
SLC3A2-217ENST00000541425 CUX2O14529 1486 aa19.36■□□□□ 0.69
SLC3A2-217ENST00000541425 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
SLC3A2-217ENST00000541425 WDR62O43379 1518 aa19.27■□□□□ 0.68
SLC3A2-217ENST00000541425 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
SLC3A2-217ENST00000541425 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
SLC3A2-217ENST00000541425 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
SLC3A2-217ENST00000541425 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
SLC3A2-217ENST00000541425 CUX1P39880 1505 aa19.01■□□□□ 0.63
SLC3A2-217ENST00000541425 IFT140Q96RY7 1462 aa18.98■□□□□ 0.63
SLC3A2-217ENST00000541425 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
SLC3A2-217ENST00000541425 FGD5Q6ZNL6 1462 aa18.96■□□□□ 0.63
SLC3A2-217ENST00000541425 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
SLC3A2-217ENST00000541425 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
SLC3A2-217ENST00000541425 SOGA1O94964 1423 aa18.91■□□□□ 0.62
SLC3A2-217ENST00000541425 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
SLC3A2-217ENST00000541425 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
SLC3A2-217ENST00000541425 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
SLC3A2-217ENST00000541425 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
SLC3A2-217ENST00000541425 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
SLC3A2-217ENST00000541425 EIF4G3O43432 1585 aaKnown RBP18.86■□□□□ 0.61
SLC3A2-217ENST00000541425 WDR97A6NE52 1622 aa18.81■□□□□ 0.6
SLC3A2-217ENST00000541425 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.67e-11■■■■■ 31.5
SLC3A2-217ENST00000541425 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
SLC3A2-217ENST00000541425 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
SLC3A2-217ENST00000541425 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
SLC3A2-217ENST00000541425 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
SLC3A2-217ENST00000541425 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
SLC3A2-217ENST00000541425 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
SLC3A2-217ENST00000541425 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
SLC3A2-217ENST00000541425 CHD1O14646 1710 aa18.64■□□□□ 0.57
SLC3A2-217ENST00000541425 FBLN2P98095 1184 aa18.64■□□□□ 0.57
SLC3A2-217ENST00000541425 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
SLC3A2-217ENST00000541425 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
SLC3A2-217ENST00000541425 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
SLC3A2-217ENST00000541425 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
SLC3A2-217ENST00000541425 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
SLC3A2-217ENST00000541425 KIF27Q86VH2 1401 aa18.55■□□□□ 0.56
SLC3A2-217ENST00000541425 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
SLC3A2-217ENST00000541425 SYNJ2O15056 1496 aa18.53■□□□□ 0.56
SLC3A2-217ENST00000541425 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
SLC3A2-217ENST00000541425 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
SLC3A2-217ENST00000541425 CUL7Q14999 1698 aa18.44■□□□□ 0.54
SLC3A2-217ENST00000541425 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
SLC3A2-217ENST00000541425 IGF1RP08069 1367 aa18.41■□□□□ 0.54
SLC3A2-217ENST00000541425 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.54
SLC3A2-217ENST00000541425 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
SLC3A2-217ENST00000541425 CLASP1Q7Z460 1538 aa18.36■□□□□ 0.53
SLC3A2-217ENST00000541425 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
SLC3A2-217ENST00000541425 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
SLC3A2-217ENST00000541425 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
SLC3A2-217ENST00000541425 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
SLC3A2-217ENST00000541425 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
SLC3A2-217ENST00000541425 NUP160Q12769 1436 aa18.31■□□□□ 0.52
SLC3A2-217ENST00000541425 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
SLC3A2-217ENST00000541425 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
SLC3A2-217ENST00000541425 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
SLC3A2-217ENST00000541425 EEA1Q15075 1411 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms