RNA–Protein interactions for RNA: ENST00000541041.1

MACROD1-204, Transcript of MACRO domain containing 1, humanhuman

TSL 3

Gene MACROD1, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACROD1-204ENST00000541041 NISCHQ9Y2I1 1504 aa30.14■■■□□ 2.42
MACROD1-204ENST00000541041 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
MACROD1-204ENST00000541041 ABCC9O60706 1549 aa25.41■■□□□ 1.66
MACROD1-204ENST00000541041 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
MACROD1-204ENST00000541041 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
MACROD1-204ENST00000541041 DCAF1Q9Y4B6 1507 aa24.99■■□□□ 1.59
MACROD1-204ENST00000541041 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
MACROD1-204ENST00000541041 NACADO15069 1562 aa24.85■■□□□ 1.57
MACROD1-204ENST00000541041 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
MACROD1-204ENST00000541041 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
MACROD1-204ENST00000541041 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
MACROD1-204ENST00000541041 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
MACROD1-204ENST00000541041 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.41
MACROD1-204ENST00000541041 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
MACROD1-204ENST00000541041 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
MACROD1-204ENST00000541041 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
MACROD1-204ENST00000541041 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
MACROD1-204ENST00000541041 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
MACROD1-204ENST00000541041 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
MACROD1-204ENST00000541041 MROH2BQ7Z745 1585 aa23.19■■□□□ 1.3
MACROD1-204ENST00000541041 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.29
MACROD1-204ENST00000541041 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
MACROD1-204ENST00000541041 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
MACROD1-204ENST00000541041 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
MACROD1-204ENST00000541041 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
MACROD1-204ENST00000541041 WIZO95785 1651 aa22.93■■□□□ 1.26
MACROD1-204ENST00000541041 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
MACROD1-204ENST00000541041 BAZ1BQ9UIG0 1483 aaKnown RBP22.87■■□□□ 1.25
MACROD1-204ENST00000541041 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
MACROD1-204ENST00000541041 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
MACROD1-204ENST00000541041 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
MACROD1-204ENST00000541041 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
MACROD1-204ENST00000541041 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.17
MACROD1-204ENST00000541041 CFTRP13569 1480 aa22.27■■□□□ 1.16
MACROD1-204ENST00000541041 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
MACROD1-204ENST00000541041 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
MACROD1-204ENST00000541041 NESP48681 1621 aa22.1■■□□□ 1.13
MACROD1-204ENST00000541041 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
MACROD1-204ENST00000541041 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
MACROD1-204ENST00000541041 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
MACROD1-204ENST00000541041 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
MACROD1-204ENST00000541041 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
MACROD1-204ENST00000541041 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
MACROD1-204ENST00000541041 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
MACROD1-204ENST00000541041 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
MACROD1-204ENST00000541041 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
MACROD1-204ENST00000541041 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
MACROD1-204ENST00000541041 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
MACROD1-204ENST00000541041 CUX1P39880 1505 aa21.73■■□□□ 1.07
MACROD1-204ENST00000541041 URB2Q14146 1524 aaKnown RBP21.71■■□□□ 1.07
MACROD1-204ENST00000541041 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
MACROD1-204ENST00000541041 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
MACROD1-204ENST00000541041 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
MACROD1-204ENST00000541041 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
MACROD1-204ENST00000541041 WDR62O43379 1518 aa21.65■■□□□ 1.06
MACROD1-204ENST00000541041 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
MACROD1-204ENST00000541041 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
MACROD1-204ENST00000541041 SOGA1O94964 1423 aa21.57■■□□□ 1.04
MACROD1-204ENST00000541041 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
MACROD1-204ENST00000541041 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
MACROD1-204ENST00000541041 CUX2O14529 1486 aa21.46■■□□□ 1.03
MACROD1-204ENST00000541041 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
MACROD1-204ENST00000541041 EEA1Q15075 1411 aa21.45■■□□□ 1.02
MACROD1-204ENST00000541041 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
MACROD1-204ENST00000541041 ABCA10Q8WWZ4 1543 aa21.44■■□□□ 1.02
MACROD1-204ENST00000541041 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
MACROD1-204ENST00000541041 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
MACROD1-204ENST00000541041 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
MACROD1-204ENST00000541041 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
MACROD1-204ENST00000541041 WDR97A6NE52 1622 aa21.33■■□□□ 1
MACROD1-204ENST00000541041 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
MACROD1-204ENST00000541041 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
MACROD1-204ENST00000541041 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.99
MACROD1-204ENST00000541041 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
MACROD1-204ENST00000541041 IGF1RP08069 1367 aa21.24■□□□□ 0.99
MACROD1-204ENST00000541041 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
MACROD1-204ENST00000541041 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
MACROD1-204ENST00000541041 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
MACROD1-204ENST00000541041 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
MACROD1-204ENST00000541041 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
MACROD1-204ENST00000541041 CUL7Q14999 1698 aa21.1■□□□□ 0.97
MACROD1-204ENST00000541041 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
MACROD1-204ENST00000541041 PRXQ9BXM0 1461 aa21.1■□□□□ 0.97
MACROD1-204ENST00000541041 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
MACROD1-204ENST00000541041 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
MACROD1-204ENST00000541041 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
MACROD1-204ENST00000541041 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
MACROD1-204ENST00000541041 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
MACROD1-204ENST00000541041 KIF21BO75037 1637 aa21.04■□□□□ 0.96
MACROD1-204ENST00000541041 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
MACROD1-204ENST00000541041 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
MACROD1-204ENST00000541041 FBLN2P98095 1184 aa21.01■□□□□ 0.95
MACROD1-204ENST00000541041 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
MACROD1-204ENST00000541041 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
MACROD1-204ENST00000541041 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
MACROD1-204ENST00000541041 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
MACROD1-204ENST00000541041 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
MACROD1-204ENST00000541041 TNIKQ9UKE5 1360 aa20.91■□□□□ 0.94
MACROD1-204ENST00000541041 NUP160Q12769 1436 aa20.79■□□□□ 0.92
MACROD1-204ENST00000541041 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms