RNA–Protein interactions for RNA: ENST00000540871.5

PSMA6-202, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2 BASIC

Gene PSMA6, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-202ENST00000540871 NISCHQ9Y2I1 1504 aa19.55■□□□□ 0.72
PSMA6-202ENST00000540871 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
PSMA6-202ENST00000540871 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
PSMA6-202ENST00000540871 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
PSMA6-202ENST00000540871 ABCC9O60706 1549 aa17.21■□□□□ 0.35
PSMA6-202ENST00000540871 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
PSMA6-202ENST00000540871 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
PSMA6-202ENST00000540871 NACADO15069 1562 aa16.42■□□□□ 0.22
PSMA6-202ENST00000540871 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
PSMA6-202ENST00000540871 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
PSMA6-202ENST00000540871 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.184e-6■□□□□ 9.3
PSMA6-202ENST00000540871 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
PSMA6-202ENST00000540871 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
PSMA6-202ENST00000540871 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
PSMA6-202ENST00000540871 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
PSMA6-202ENST00000540871 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
PSMA6-202ENST00000540871 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
PSMA6-202ENST00000540871 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.07
PSMA6-202ENST00000540871 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
PSMA6-202ENST00000540871 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
PSMA6-202ENST00000540871 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
PSMA6-202ENST00000540871 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
PSMA6-202ENST00000540871 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
PSMA6-202ENST00000540871 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
PSMA6-202ENST00000540871 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
PSMA6-202ENST00000540871 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
PSMA6-202ENST00000540871 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
PSMA6-202ENST00000540871 BAZ1BQ9UIG0 1483 aaKnown RBP15.08■□□□□ 0
PSMA6-202ENST00000540871 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
PSMA6-202ENST00000540871 HMGXB3Q12766 1538 aa15.02□□□□□ -0.01
PSMA6-202ENST00000540871 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
PSMA6-202ENST00000540871 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
PSMA6-202ENST00000540871 RSF1Q96T23 1441 aaPredicted RBP14.89□□□□□ -0.03
PSMA6-202ENST00000540871 WIZO95785 1651 aa14.87□□□□□ -0.03
PSMA6-202ENST00000540871 NESP48681 1621 aa14.81□□□□□ -0.04
PSMA6-202ENST00000540871 PDS5BQ9NTI5 1447 aa14.77□□□□□ -0.04
PSMA6-202ENST00000540871 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
PSMA6-202ENST00000540871 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
PSMA6-202ENST00000540871 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
PSMA6-202ENST00000540871 CUX2O14529 1486 aa14.69□□□□□ -0.06
PSMA6-202ENST00000540871 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
PSMA6-202ENST00000540871 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
PSMA6-202ENST00000540871 CFTRP13569 1480 aa14.59□□□□□ -0.07
PSMA6-202ENST00000540871 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.08
PSMA6-202ENST00000540871 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
PSMA6-202ENST00000540871 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
PSMA6-202ENST00000540871 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
PSMA6-202ENST00000540871 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
PSMA6-202ENST00000540871 DNAJC5Q9H3Z4 198 aa14.44□□□□□ -0.1
PSMA6-202ENST00000540871 WDR62O43379 1518 aa14.42□□□□□ -0.1
PSMA6-202ENST00000540871 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
PSMA6-202ENST00000540871 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
PSMA6-202ENST00000540871 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
PSMA6-202ENST00000540871 FOXD1Q16676 465 aa14.33□□□□□ -0.12
PSMA6-202ENST00000540871 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
PSMA6-202ENST00000540871 IFT140Q96RY7 1462 aa14.27□□□□□ -0.12
PSMA6-202ENST00000540871 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
PSMA6-202ENST00000540871 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
PSMA6-202ENST00000540871 SOGA1O94964 1423 aa14.21□□□□□ -0.13
PSMA6-202ENST00000540871 FBLN2P98095 1184 aa14.19□□□□□ -0.14
PSMA6-202ENST00000540871 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
PSMA6-202ENST00000540871 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
PSMA6-202ENST00000540871 PLPPR3Q6T4P5 718 aa14.15□□□□□ -0.14
PSMA6-202ENST00000540871 AQRO60306 1485 aaKnown RBP eCLIP14.14□□□□□ -0.154e-6■■■■□ 25.5
PSMA6-202ENST00000540871 RAD54L2Q9Y4B4 1467 aa14.14□□□□□ -0.15
PSMA6-202ENST00000540871 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
PSMA6-202ENST00000540871 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
PSMA6-202ENST00000540871 CUX1P39880 1505 aa14.12□□□□□ -0.15
PSMA6-202ENST00000540871 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
PSMA6-202ENST00000540871 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
PSMA6-202ENST00000540871 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.16
PSMA6-202ENST00000540871 EIF4G3O43432 1585 aaKnown RBP14.06□□□□□ -0.16
PSMA6-202ENST00000540871 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
PSMA6-202ENST00000540871 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
PSMA6-202ENST00000540871 GAPVD1Q14C86 1478 aa14□□□□□ -0.17
PSMA6-202ENST00000540871 WDR97A6NE52 1622 aa13.98□□□□□ -0.17
PSMA6-202ENST00000540871 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
PSMA6-202ENST00000540871 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
PSMA6-202ENST00000540871 SNAPC4Q5SXM2 1469 aa13.97□□□□□ -0.17
PSMA6-202ENST00000540871 MAGI1Q96QZ7 1491 aaPredicted RBP13.95□□□□□ -0.18
PSMA6-202ENST00000540871 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
PSMA6-202ENST00000540871 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
PSMA6-202ENST00000540871 CHD1O14646 1710 aa13.9□□□□□ -0.18
PSMA6-202ENST00000540871 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
PSMA6-202ENST00000540871 CYB5RLQ6IPT4 315 aa13.89□□□□□ -0.19
PSMA6-202ENST00000540871 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
PSMA6-202ENST00000540871 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
PSMA6-202ENST00000540871 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
PSMA6-202ENST00000540871 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
PSMA6-202ENST00000540871 ARHGEF11O15085 1522 aa13.82□□□□□ -0.2
PSMA6-202ENST00000540871 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
PSMA6-202ENST00000540871 RIMBP3CA6NJZ7 1639 aa13.81□□□□□ -0.2
PSMA6-202ENST00000540871 RIMBP3BA6NNM3 1639 aa13.81□□□□□ -0.2
PSMA6-202ENST00000540871 RIMBP3Q9UFD9 1639 aa13.81□□□□□ -0.2
PSMA6-202ENST00000540871 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
PSMA6-202ENST00000540871 IGF1RP08069 1367 aa13.76□□□□□ -0.21
PSMA6-202ENST00000540871 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
PSMA6-202ENST00000540871 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
PSMA6-202ENST00000540871 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
PSMA6-202ENST00000540871 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms