RNA–Protein interactions for RNA: ENST00000540852.1

CADM1-209, Transcript of cell adhesion molecule 1, humanhuman

TSL 2

Gene CADM1, Length 476 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-209ENST00000540852 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
CADM1-209ENST00000540852 CCDC180Q9P1Z9 1646 aa34.36■■■■□ 3.09
CADM1-209ENST00000540852 ABCC9O60706 1549 aa34.11■■■■□ 3.05
CADM1-209ENST00000540852 RB1CC1Q8TDY2 1594 aa32.55■■■□□ 2.8
CADM1-209ENST00000540852 NACADO15069 1562 aa32.4■■■□□ 2.78
CADM1-209ENST00000540852 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
CADM1-209ENST00000540852 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
CADM1-209ENST00000540852 UNC13AQ9UPW8 1703 aa32■■■□□ 2.71
CADM1-209ENST00000540852 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
CADM1-209ENST00000540852 ZCCHC6Q5VYS8 1495 aaKnown RBP31.82■■■□□ 2.68
CADM1-209ENST00000540852 PABPN1Q86U42 306 aaKnown RBP eCLIP31.75■■■□□ 2.67
CADM1-209ENST00000540852 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
CADM1-209ENST00000540852 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.66
CADM1-209ENST00000540852 SCRIBQ14160 1630 aa31.26■■■□□ 2.59
CADM1-209ENST00000540852 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
CADM1-209ENST00000540852 CC2D2AQ9P2K1 1620 aa30.88■■■□□ 2.53
CADM1-209ENST00000540852 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
CADM1-209ENST00000540852 CECR2Q9BXF3 1484 aa30.71■■■□□ 2.51
CADM1-209ENST00000540852 NCAPD3P42695 1498 aa29.92■■■□□ 2.38
CADM1-209ENST00000540852 SMARCA4P51532 1647 aa29.89■■■□□ 2.37
CADM1-209ENST00000540852 ATAD2BQ9ULI0 1458 aa29.85■■■□□ 2.37
CADM1-209ENST00000540852 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
CADM1-209ENST00000540852 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
CADM1-209ENST00000540852 BAZ1AQ9NRL2 1556 aaPredicted RBP29.7■■■□□ 2.35
CADM1-209ENST00000540852 PEG3Q9GZU2 1588 aa29.63■■■□□ 2.33
CADM1-209ENST00000540852 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
CADM1-209ENST00000540852 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
CADM1-209ENST00000540852 NESP48681 1621 aa29.41■■■□□ 2.3
CADM1-209ENST00000540852 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
CADM1-209ENST00000540852 CUX2O14529 1486 aa29.35■■■□□ 2.29
CADM1-209ENST00000540852 WIZO95785 1651 aa29.21■■■□□ 2.27
CADM1-209ENST00000540852 LAMC3Q9Y6N6 1575 aa29.21■■■□□ 2.27
CADM1-209ENST00000540852 DNAJC5Q9H3Z4 198 aa29.14■■■□□ 2.26
CADM1-209ENST00000540852 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
CADM1-209ENST00000540852 KIF21AQ7Z4S6 1674 aa29.08■■■□□ 2.25
CADM1-209ENST00000540852 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
CADM1-209ENST00000540852 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
CADM1-209ENST00000540852 PDS5BQ9NTI5 1447 aa28.95■■■□□ 2.23
CADM1-209ENST00000540852 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
CADM1-209ENST00000540852 MRC2Q9UBG0 1479 aa28.74■■■□□ 2.19
CADM1-209ENST00000540852 WDR62O43379 1518 aa28.72■■■□□ 2.19
CADM1-209ENST00000540852 CFTRP13569 1480 aa28.72■■■□□ 2.19
CADM1-209ENST00000540852 FANCD2Q9BXW9 1451 aa28.65■■■□□ 2.18
CADM1-209ENST00000540852 CEP164Q9UPV0 1460 aa28.64■■■□□ 2.17
CADM1-209ENST00000540852 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
CADM1-209ENST00000540852 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
CADM1-209ENST00000540852 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
CADM1-209ENST00000540852 TOPBP1Q92547 1522 aa28.15■■■□□ 2.1
CADM1-209ENST00000540852 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
CADM1-209ENST00000540852 ZNF608Q9ULD9 1512 aaPredicted RBP28.07■■■□□ 2.08
CADM1-209ENST00000540852 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
CADM1-209ENST00000540852 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
CADM1-209ENST00000540852 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
CADM1-209ENST00000540852 OSCARQ8IYS5 282 aa27.95■■■□□ 2.06
CADM1-209ENST00000540852 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
CADM1-209ENST00000540852 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
CADM1-209ENST00000540852 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
CADM1-209ENST00000540852 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.047e-6■■□□□ 13.1
CADM1-209ENST00000540852 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.04
CADM1-209ENST00000540852 CUX1P39880 1505 aa27.75■■■□□ 2.03
CADM1-209ENST00000540852 CHD1O14646 1710 aa27.72■■■□□ 2.03
CADM1-209ENST00000540852 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.03
CADM1-209ENST00000540852 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.03
CADM1-209ENST00000540852 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.03
CADM1-209ENST00000540852 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.03
CADM1-209ENST00000540852 SOGA1O94964 1423 aa27.69■■■□□ 2.02
CADM1-209ENST00000540852 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
CADM1-209ENST00000540852 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
CADM1-209ENST00000540852 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
CADM1-209ENST00000540852 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
CADM1-209ENST00000540852 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
CADM1-209ENST00000540852 GRIN2BQ13224 1484 aa27.44■■□□□ 1.98
CADM1-209ENST00000540852 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
CADM1-209ENST00000540852 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
CADM1-209ENST00000540852 FBLN2P98095 1184 aa27.43■■□□□ 1.98
CADM1-209ENST00000540852 ABCA10Q8WWZ4 1543 aa27.42■■□□□ 1.98
CADM1-209ENST00000540852 ABCA5Q8WWZ7 1642 aa27.41■■□□□ 1.98
CADM1-209ENST00000540852 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
CADM1-209ENST00000540852 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
CADM1-209ENST00000540852 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
CADM1-209ENST00000540852 ARAP1Q96P48 1450 aa27.37■■□□□ 1.97
CADM1-209ENST00000540852 SYNJ2O15056 1496 aa27.35■■□□□ 1.97
CADM1-209ENST00000540852 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
CADM1-209ENST00000540852 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
CADM1-209ENST00000540852 CHMP7Q8WUX9 453 aaPredicted RBP27.29■■□□□ 1.96
CADM1-209ENST00000540852 CYB5RLQ6IPT4 315 aa27.28■■□□□ 1.96
CADM1-209ENST00000540852 WRNQ14191 1432 aaPredicted RBP eCLIP27.27■■□□□ 1.96
CADM1-209ENST00000540852 ADAMTS12P58397 1594 aa27.17■■□□□ 1.94
CADM1-209ENST00000540852 GRIN2AQ12879 1464 aa27.12■■□□□ 1.93
CADM1-209ENST00000540852 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
CADM1-209ENST00000540852 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
CADM1-209ENST00000540852 NUP160Q12769 1436 aa27.06■■□□□ 1.92
CADM1-209ENST00000540852 FHAD1B1AJZ9 1412 aa27.03■■□□□ 1.92
CADM1-209ENST00000540852 ERCC6L2Q5T890 1561 aa27.01■■□□□ 1.91
CADM1-209ENST00000540852 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
CADM1-209ENST00000540852 TRHP20396 242 aaPredicted RBP26.85■■□□□ 1.89
CADM1-209ENST00000540852 RUSC2Q8N2Y8 1516 aa26.79■■□□□ 1.88
CADM1-209ENST00000540852 IGF1RP08069 1367 aa26.75■■□□□ 1.87
CADM1-209ENST00000540852 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
CADM1-209ENST00000540852 PRG4Q92954 1404 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms