RNA–Protein interactions for RNA: ENST00000540296.5

IST1-217, Transcript of IST1, ESCRT-III associated factor, humanhuman

TSL 4

Gene IST1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IST1-217ENST00000540296 NISCHQ9Y2I1 1504 aa17.48■□□□□ 0.39
IST1-217ENST00000540296 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
IST1-217ENST00000540296 ABCC9O60706 1549 aa15.17■□□□□ 0.02
IST1-217ENST00000540296 NACADO15069 1562 aa14.63□□□□□ -0.07
IST1-217ENST00000540296 RB1CC1Q8TDY2 1594 aa14.63□□□□□ -0.07
IST1-217ENST00000540296 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
IST1-217ENST00000540296 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
IST1-217ENST00000540296 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
IST1-217ENST00000540296 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
IST1-217ENST00000540296 UNC13AQ9UPW8 1703 aa14.32□□□□□ -0.12
IST1-217ENST00000540296 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
IST1-217ENST00000540296 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
IST1-217ENST00000540296 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
IST1-217ENST00000540296 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
IST1-217ENST00000540296 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
IST1-217ENST00000540296 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
IST1-217ENST00000540296 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
IST1-217ENST00000540296 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
IST1-217ENST00000540296 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
IST1-217ENST00000540296 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
IST1-217ENST00000540296 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
IST1-217ENST00000540296 NCAPD3P42695 1498 aa13.5□□□□□ -0.25
IST1-217ENST00000540296 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
IST1-217ENST00000540296 CHIC1Q5VXU3 224 aa13.48□□□□□ -0.25
IST1-217ENST00000540296 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
IST1-217ENST00000540296 MROH2BQ7Z745 1585 aa13.46□□□□□ -0.25
IST1-217ENST00000540296 PEG3Q9GZU2 1588 aa13.46□□□□□ -0.25
IST1-217ENST00000540296 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
IST1-217ENST00000540296 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
IST1-217ENST00000540296 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
IST1-217ENST00000540296 WIZO95785 1651 aa13.31□□□□□ -0.28
IST1-217ENST00000540296 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
IST1-217ENST00000540296 NESP48681 1621 aa13.13□□□□□ -0.31
IST1-217ENST00000540296 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
IST1-217ENST00000540296 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
IST1-217ENST00000540296 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
IST1-217ENST00000540296 PDS5BQ9NTI5 1447 aa13.03□□□□□ -0.32
IST1-217ENST00000540296 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
IST1-217ENST00000540296 CFTRP13569 1480 aa13.02□□□□□ -0.33
IST1-217ENST00000540296 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
IST1-217ENST00000540296 CUX2O14529 1486 aa12.97□□□□□ -0.33
IST1-217ENST00000540296 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
IST1-217ENST00000540296 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
IST1-217ENST00000540296 FANCD2Q9BXW9 1451 aa12.92□□□□□ -0.34
IST1-217ENST00000540296 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
IST1-217ENST00000540296 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
IST1-217ENST00000540296 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
IST1-217ENST00000540296 WDR62O43379 1518 aa12.87□□□□□ -0.35
IST1-217ENST00000540296 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
IST1-217ENST00000540296 ABCC8Q09428 1581 aa12.74□□□□□ -0.37
IST1-217ENST00000540296 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
IST1-217ENST00000540296 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
IST1-217ENST00000540296 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
IST1-217ENST00000540296 CUX1P39880 1505 aa12.63□□□□□ -0.39
IST1-217ENST00000540296 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
IST1-217ENST00000540296 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
IST1-217ENST00000540296 DNAJC5Q9H3Z4 198 aa12.58□□□□□ -0.4
IST1-217ENST00000540296 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
IST1-217ENST00000540296 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
IST1-217ENST00000540296 SOGA1O94964 1423 aa12.55□□□□□ -0.4
IST1-217ENST00000540296 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
IST1-217ENST00000540296 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
IST1-217ENST00000540296 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
IST1-217ENST00000540296 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
IST1-217ENST00000540296 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
IST1-217ENST00000540296 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
IST1-217ENST00000540296 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
IST1-217ENST00000540296 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.414e-7■■■■■ 26.9
IST1-217ENST00000540296 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
IST1-217ENST00000540296 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
IST1-217ENST00000540296 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
IST1-217ENST00000540296 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
IST1-217ENST00000540296 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
IST1-217ENST00000540296 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
IST1-217ENST00000540296 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.43
IST1-217ENST00000540296 PBRM1Q86U86 1689 aa12.39□□□□□ -0.43
IST1-217ENST00000540296 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
IST1-217ENST00000540296 CHD1O14646 1710 aa12.38□□□□□ -0.43
IST1-217ENST00000540296 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
IST1-217ENST00000540296 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
IST1-217ENST00000540296 FBLN2P98095 1184 aa12.31□□□□□ -0.44
IST1-217ENST00000540296 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
IST1-217ENST00000540296 ADAMTS12P58397 1594 aa12.3□□□□□ -0.44
IST1-217ENST00000540296 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
IST1-217ENST00000540296 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
IST1-217ENST00000540296 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
IST1-217ENST00000540296 GRIN2AQ12879 1464 aa12.26□□□□□ -0.45
IST1-217ENST00000540296 IGF1RP08069 1367 aa12.25□□□□□ -0.45
IST1-217ENST00000540296 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
IST1-217ENST00000540296 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
IST1-217ENST00000540296 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
IST1-217ENST00000540296 NUP160Q12769 1436 aa12.22□□□□□ -0.45
IST1-217ENST00000540296 ARHGEF11O15085 1522 aa12.21□□□□□ -0.45
IST1-217ENST00000540296 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
IST1-217ENST00000540296 CUL7Q14999 1698 aa12.21□□□□□ -0.45
IST1-217ENST00000540296 CEP170Q5SW79 1584 aa12.2□□□□□ -0.46
IST1-217ENST00000540296 CARMIL1Q5VZK9 1371 aa12.16□□□□□ -0.46
IST1-217ENST00000540296 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
IST1-217ENST00000540296 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
IST1-217ENST00000540296 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms