RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
TMEM109-203ENST00000540280 ABCC9O60706 1549 aa27.54■■■□□ 2
TMEM109-203ENST00000540280 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
TMEM109-203ENST00000540280 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
TMEM109-203ENST00000540280 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
TMEM109-203ENST00000540280 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
TMEM109-203ENST00000540280 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
TMEM109-203ENST00000540280 UNC13AQ9UPW8 1703 aa25.09■■□□□ 1.61
TMEM109-203ENST00000540280 NACADO15069 1562 aa24.95■■□□□ 1.58
TMEM109-203ENST00000540280 CECR2Q9BXF3 1484 aa24.91■■□□□ 1.58
TMEM109-203ENST00000540280 BICRAQ9NZM4 1560 aa24.91■■□□□ 1.58
TMEM109-203ENST00000540280 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
TMEM109-203ENST00000540280 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
TMEM109-203ENST00000540280 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
TMEM109-203ENST00000540280 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
TMEM109-203ENST00000540280 CUX2O14529 1486 aa24.22■■□□□ 1.47
TMEM109-203ENST00000540280 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
TMEM109-203ENST00000540280 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.45
TMEM109-203ENST00000540280 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
TMEM109-203ENST00000540280 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
TMEM109-203ENST00000540280 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
TMEM109-203ENST00000540280 NESP48681 1621 aa23.27■■□□□ 1.32
TMEM109-203ENST00000540280 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
TMEM109-203ENST00000540280 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
TMEM109-203ENST00000540280 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
TMEM109-203ENST00000540280 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
TMEM109-203ENST00000540280 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
TMEM109-203ENST00000540280 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
TMEM109-203ENST00000540280 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
TMEM109-203ENST00000540280 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
TMEM109-203ENST00000540280 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
TMEM109-203ENST00000540280 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
TMEM109-203ENST00000540280 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
TMEM109-203ENST00000540280 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
TMEM109-203ENST00000540280 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
TMEM109-203ENST00000540280 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
TMEM109-203ENST00000540280 TRHP20396 242 aaPredicted RBP22.68■■□□□ 1.22
TMEM109-203ENST00000540280 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
TMEM109-203ENST00000540280 WDR62O43379 1518 aa22.62■■□□□ 1.21
TMEM109-203ENST00000540280 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
TMEM109-203ENST00000540280 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
TMEM109-203ENST00000540280 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
TMEM109-203ENST00000540280 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
TMEM109-203ENST00000540280 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
TMEM109-203ENST00000540280 ILDR1Q86SU0 546 aaPredicted RBP22.41■■□□□ 1.18
TMEM109-203ENST00000540280 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
TMEM109-203ENST00000540280 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
TMEM109-203ENST00000540280 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
TMEM109-203ENST00000540280 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
TMEM109-203ENST00000540280 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
TMEM109-203ENST00000540280 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
TMEM109-203ENST00000540280 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
TMEM109-203ENST00000540280 CHD1O14646 1710 aa21.98■■□□□ 1.11
TMEM109-203ENST00000540280 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
TMEM109-203ENST00000540280 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
TMEM109-203ENST00000540280 EIF4G3O43432 1585 aaKnown RBP21.83■■□□□ 1.09
TMEM109-203ENST00000540280 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
TMEM109-203ENST00000540280 CFTRP13569 1480 aa21.74■■□□□ 1.07
TMEM109-203ENST00000540280 FBLN2P98095 1184 aa21.7■■□□□ 1.06
TMEM109-203ENST00000540280 CLASP1Q7Z460 1538 aa21.62■■□□□ 1.05
TMEM109-203ENST00000540280 WIZO95785 1651 aa21.6■■□□□ 1.05
TMEM109-203ENST00000540280 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
TMEM109-203ENST00000540280 KDM4FA0A1W2PPD8 638 aa21.59■■□□□ 1.05
TMEM109-203ENST00000540280 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
TMEM109-203ENST00000540280 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
TMEM109-203ENST00000540280 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
TMEM109-203ENST00000540280 GAPVD1Q14C86 1478 aa21.48■■□□□ 1.03
TMEM109-203ENST00000540280 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
TMEM109-203ENST00000540280 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
TMEM109-203ENST00000540280 ERCC6L2Q5T890 1561 aa21.35■■□□□ 1.01
TMEM109-203ENST00000540280 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
TMEM109-203ENST00000540280 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
TMEM109-203ENST00000540280 DNMBPQ6XZF7 1577 aa21.3■■□□□ 1
TMEM109-203ENST00000540280 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
TMEM109-203ENST00000540280 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
TMEM109-203ENST00000540280 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
TMEM109-203ENST00000540280 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
TMEM109-203ENST00000540280 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
TMEM109-203ENST00000540280 LMTK3Q96Q04 1460 aa21.2■□□□□ 0.98
TMEM109-203ENST00000540280 KDM6BO15054 1643 aa21.19■□□□□ 0.98
TMEM109-203ENST00000540280 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
TMEM109-203ENST00000540280 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
TMEM109-203ENST00000540280 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
TMEM109-203ENST00000540280 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
TMEM109-203ENST00000540280 ADGRL1O94910 1474 aa21.11■□□□□ 0.97
TMEM109-203ENST00000540280 FAM69CQ0P6D2 419 aa21.07■□□□□ 0.96
TMEM109-203ENST00000540280 ABCC10Q5T3U5 1492 aa21.04■□□□□ 0.96
TMEM109-203ENST00000540280 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
TMEM109-203ENST00000540280 SOCS7O14512 581 aa21.03■□□□□ 0.96
TMEM109-203ENST00000540280 SOGA1O94964 1423 aa21.03■□□□□ 0.96
TMEM109-203ENST00000540280 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
TMEM109-203ENST00000540280 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
TMEM109-203ENST00000540280 DIP2BQ9P265 1576 aa21.01■□□□□ 0.95
TMEM109-203ENST00000540280 ILDR2Q71H61 639 aa21■□□□□ 0.95
TMEM109-203ENST00000540280 CEP170Q5SW79 1584 aa21■□□□□ 0.95
TMEM109-203ENST00000540280 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
TMEM109-203ENST00000540280 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
TMEM109-203ENST00000540280 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
TMEM109-203ENST00000540280 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
TMEM109-203ENST00000540280 MAPKBP1O60336 1514 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms