RNA–Protein interactions for RNA: ENST00000540205.1

MAP3K4-210, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 4

Gene MAP3K4, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-210ENST00000540205 NISCHQ9Y2I1 1504 aa32.07■■■□□ 2.72
MAP3K4-210ENST00000540205 CCDC180Q9P1Z9 1646 aa28.28■■■□□ 2.12
MAP3K4-210ENST00000540205 ABCC9O60706 1549 aa26.97■■□□□ 1.91
MAP3K4-210ENST00000540205 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
MAP3K4-210ENST00000540205 DCAF1Q9Y4B6 1507 aa26.59■■□□□ 1.85
MAP3K4-210ENST00000540205 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
MAP3K4-210ENST00000540205 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
MAP3K4-210ENST00000540205 NACADO15069 1562 aa26.41■■□□□ 1.82
MAP3K4-210ENST00000540205 RB1CC1Q8TDY2 1594 aa26.28■■□□□ 1.8
MAP3K4-210ENST00000540205 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
MAP3K4-210ENST00000540205 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
MAP3K4-210ENST00000540205 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
MAP3K4-210ENST00000540205 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
MAP3K4-210ENST00000540205 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
MAP3K4-210ENST00000540205 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
MAP3K4-210ENST00000540205 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
MAP3K4-210ENST00000540205 SMARCA4P51532 1647 aa24.76■■□□□ 1.55
MAP3K4-210ENST00000540205 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
MAP3K4-210ENST00000540205 MROH2BQ7Z745 1585 aa24.71■■□□□ 1.55
MAP3K4-210ENST00000540205 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
MAP3K4-210ENST00000540205 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
MAP3K4-210ENST00000540205 WIZO95785 1651 aa24.52■■□□□ 1.52
MAP3K4-210ENST00000540205 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
MAP3K4-210ENST00000540205 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
MAP3K4-210ENST00000540205 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
MAP3K4-210ENST00000540205 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
MAP3K4-210ENST00000540205 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
MAP3K4-210ENST00000540205 BAZ1BQ9UIG0 1483 aaKnown RBP24.29■■□□□ 1.48
MAP3K4-210ENST00000540205 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
MAP3K4-210ENST00000540205 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
MAP3K4-210ENST00000540205 DNAJC5BQ9UF47 199 aa24.12■■□□□ 1.45
MAP3K4-210ENST00000540205 CCDC88BA6NC98 1476 aa23.98■■□□□ 1.43
MAP3K4-210ENST00000540205 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
MAP3K4-210ENST00000540205 CFTRP13569 1480 aa23.65■■□□□ 1.38
MAP3K4-210ENST00000540205 PRDM2Q13029 1718 aa23.64■■□□□ 1.37
MAP3K4-210ENST00000540205 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
MAP3K4-210ENST00000540205 NESP48681 1621 aa23.53■■□□□ 1.36
MAP3K4-210ENST00000540205 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
MAP3K4-210ENST00000540205 FANCD2Q9BXW9 1451 aa23.39■■□□□ 1.34
MAP3K4-210ENST00000540205 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.33
MAP3K4-210ENST00000540205 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
MAP3K4-210ENST00000540205 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
MAP3K4-210ENST00000540205 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
MAP3K4-210ENST00000540205 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
MAP3K4-210ENST00000540205 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
MAP3K4-210ENST00000540205 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
MAP3K4-210ENST00000540205 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
MAP3K4-210ENST00000540205 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
MAP3K4-210ENST00000540205 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
MAP3K4-210ENST00000540205 CUX1P39880 1505 aa23.16■■□□□ 1.3
MAP3K4-210ENST00000540205 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
MAP3K4-210ENST00000540205 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
MAP3K4-210ENST00000540205 URB2Q14146 1524 aaKnown RBP23.1■■□□□ 1.29
MAP3K4-210ENST00000540205 TOPBP1Q92547 1522 aa23.09■■□□□ 1.29
MAP3K4-210ENST00000540205 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
MAP3K4-210ENST00000540205 WDR62O43379 1518 aa23.03■■□□□ 1.28
MAP3K4-210ENST00000540205 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
MAP3K4-210ENST00000540205 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
MAP3K4-210ENST00000540205 SOGA1O94964 1423 aa22.85■■□□□ 1.25
MAP3K4-210ENST00000540205 CUX2O14529 1486 aa22.81■■□□□ 1.24
MAP3K4-210ENST00000540205 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
MAP3K4-210ENST00000540205 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
MAP3K4-210ENST00000540205 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
MAP3K4-210ENST00000540205 ABCA10Q8WWZ4 1543 aa22.79■■□□□ 1.24
MAP3K4-210ENST00000540205 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
MAP3K4-210ENST00000540205 EEA1Q15075 1411 aa22.75■■□□□ 1.23
MAP3K4-210ENST00000540205 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
MAP3K4-210ENST00000540205 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
MAP3K4-210ENST00000540205 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
MAP3K4-210ENST00000540205 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
MAP3K4-210ENST00000540205 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
MAP3K4-210ENST00000540205 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
MAP3K4-210ENST00000540205 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
MAP3K4-210ENST00000540205 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
MAP3K4-210ENST00000540205 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
MAP3K4-210ENST00000540205 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
MAP3K4-210ENST00000540205 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.2
MAP3K4-210ENST00000540205 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
MAP3K4-210ENST00000540205 IGF1RP08069 1367 aa22.52■■□□□ 1.2
MAP3K4-210ENST00000540205 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
MAP3K4-210ENST00000540205 CUL7Q14999 1698 aa22.5■■□□□ 1.19
MAP3K4-210ENST00000540205 KIF21BO75037 1637 aa22.47■■□□□ 1.19
MAP3K4-210ENST00000540205 PRXQ9BXM0 1461 aa22.44■■□□□ 1.18
MAP3K4-210ENST00000540205 CARMIL1Q5VZK9 1371 aa22.42■■□□□ 1.18
MAP3K4-210ENST00000540205 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
MAP3K4-210ENST00000540205 ADAMTS12P58397 1594 aa22.39■■□□□ 1.18
MAP3K4-210ENST00000540205 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
MAP3K4-210ENST00000540205 RAPGEF2Q9Y4G8 1499 aa22.38■■□□□ 1.17
MAP3K4-210ENST00000540205 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
MAP3K4-210ENST00000540205 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
MAP3K4-210ENST00000540205 LOC105371045A0A1W2PR82 267 aa22.32■■□□□ 1.16
MAP3K4-210ENST00000540205 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
MAP3K4-210ENST00000540205 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
MAP3K4-210ENST00000540205 UBTFP17480 764 aaKnown RBP22.25■■□□□ 1.15
MAP3K4-210ENST00000540205 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
MAP3K4-210ENST00000540205 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
MAP3K4-210ENST00000540205 CHD1O14646 1710 aa22.21■■□□□ 1.15
MAP3K4-210ENST00000540205 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
MAP3K4-210ENST00000540205 CTTNBP2Q8WZ74 1663 aa22.19■■□□□ 1.14
MAP3K4-210ENST00000540205 FBLN2P98095 1184 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms