RNA–Protein interactions for RNA: ENST00000539985.5

ARMC6-212, Transcript of armadillo repeat containing 6, humanhuman

TSL 2

Gene ARMC6, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMC6-212ENST00000539985 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
ARMC6-212ENST00000539985 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
ARMC6-212ENST00000539985 ABCC9O60706 1549 aa27.87■■■□□ 2.05
ARMC6-212ENST00000539985 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
ARMC6-212ENST00000539985 NACADO15069 1562 aa26.3■■□□□ 1.8
ARMC6-212ENST00000539985 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
ARMC6-212ENST00000539985 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
ARMC6-212ENST00000539985 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
ARMC6-212ENST00000539985 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
ARMC6-212ENST00000539985 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
ARMC6-212ENST00000539985 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
ARMC6-212ENST00000539985 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
ARMC6-212ENST00000539985 DCAF1Q9Y4B6 1507 aa25.64■■□□□ 1.7
ARMC6-212ENST00000539985 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
ARMC6-212ENST00000539985 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
ARMC6-212ENST00000539985 CC2D2AQ9P2K1 1620 aa25.18■■□□□ 1.62
ARMC6-212ENST00000539985 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
ARMC6-212ENST00000539985 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
ARMC6-212ENST00000539985 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
ARMC6-212ENST00000539985 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
ARMC6-212ENST00000539985 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
ARMC6-212ENST00000539985 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
ARMC6-212ENST00000539985 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
ARMC6-212ENST00000539985 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
ARMC6-212ENST00000539985 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
ARMC6-212ENST00000539985 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
ARMC6-212ENST00000539985 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
ARMC6-212ENST00000539985 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
ARMC6-212ENST00000539985 NESP48681 1621 aa23.99■■□□□ 1.43
ARMC6-212ENST00000539985 WIZO95785 1651 aa23.87■■□□□ 1.41
ARMC6-212ENST00000539985 CUX2O14529 1486 aa23.83■■□□□ 1.41
ARMC6-212ENST00000539985 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
ARMC6-212ENST00000539985 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
ARMC6-212ENST00000539985 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
ARMC6-212ENST00000539985 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
ARMC6-212ENST00000539985 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
ARMC6-212ENST00000539985 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
ARMC6-212ENST00000539985 CADPSQ9ULU8 1353 aa23.51■■□□□ 1.35
ARMC6-212ENST00000539985 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
ARMC6-212ENST00000539985 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
ARMC6-212ENST00000539985 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
ARMC6-212ENST00000539985 WDR62O43379 1518 aa23.37■■□□□ 1.33
ARMC6-212ENST00000539985 FANCD2Q9BXW9 1451 aa23.34■■□□□ 1.33
ARMC6-212ENST00000539985 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
ARMC6-212ENST00000539985 CFTRP13569 1480 aa23.29■■□□□ 1.32
ARMC6-212ENST00000539985 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
ARMC6-212ENST00000539985 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
ARMC6-212ENST00000539985 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
ARMC6-212ENST00000539985 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
ARMC6-212ENST00000539985 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
ARMC6-212ENST00000539985 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
ARMC6-212ENST00000539985 EIF4G3O43432 1585 aaKnown RBP22.84■■□□□ 1.25
ARMC6-212ENST00000539985 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
ARMC6-212ENST00000539985 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
ARMC6-212ENST00000539985 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
ARMC6-212ENST00000539985 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
ARMC6-212ENST00000539985 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
ARMC6-212ENST00000539985 CHD1O14646 1710 aa22.7■■□□□ 1.22
ARMC6-212ENST00000539985 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
ARMC6-212ENST00000539985 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.224e-6■■■■□ 23.2
ARMC6-212ENST00000539985 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
ARMC6-212ENST00000539985 CUX1P39880 1505 aa22.62■■□□□ 1.21
ARMC6-212ENST00000539985 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
ARMC6-212ENST00000539985 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
ARMC6-212ENST00000539985 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
ARMC6-212ENST00000539985 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
ARMC6-212ENST00000539985 SOGA1O94964 1423 aa22.54■■□□□ 1.2
ARMC6-212ENST00000539985 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
ARMC6-212ENST00000539985 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
ARMC6-212ENST00000539985 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
ARMC6-212ENST00000539985 FBLN2P98095 1184 aa22.49■■□□□ 1.19
ARMC6-212ENST00000539985 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
ARMC6-212ENST00000539985 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
ARMC6-212ENST00000539985 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
ARMC6-212ENST00000539985 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
ARMC6-212ENST00000539985 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
ARMC6-212ENST00000539985 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
ARMC6-212ENST00000539985 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
ARMC6-212ENST00000539985 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
ARMC6-212ENST00000539985 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
ARMC6-212ENST00000539985 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
ARMC6-212ENST00000539985 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
ARMC6-212ENST00000539985 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
ARMC6-212ENST00000539985 CHMP7Q8WUX9 453 aaPredicted RBP22.26■■□□□ 1.15
ARMC6-212ENST00000539985 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
ARMC6-212ENST00000539985 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
ARMC6-212ENST00000539985 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
ARMC6-212ENST00000539985 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
ARMC6-212ENST00000539985 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
ARMC6-212ENST00000539985 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
ARMC6-212ENST00000539985 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
ARMC6-212ENST00000539985 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
ARMC6-212ENST00000539985 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
ARMC6-212ENST00000539985 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
ARMC6-212ENST00000539985 NUP160Q12769 1436 aa21.96■■□□□ 1.11
ARMC6-212ENST00000539985 SHROOM2Q13796 1616 aa21.92■■□□□ 1.1
ARMC6-212ENST00000539985 RUSC2Q8N2Y8 1516 aa21.89■■□□□ 1.09
ARMC6-212ENST00000539985 CUL7Q14999 1698 aa21.82■■□□□ 1.08
ARMC6-212ENST00000539985 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
ARMC6-212ENST00000539985 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms