RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
CYB561A3-213ENST00000539890 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
CYB561A3-213ENST00000539890 ABCC9O60706 1549 aa26■■□□□ 1.75
CYB561A3-213ENST00000539890 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
CYB561A3-213ENST00000539890 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
CYB561A3-213ENST00000539890 NACADO15069 1562 aa24.96■■□□□ 1.59
CYB561A3-213ENST00000539890 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
CYB561A3-213ENST00000539890 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
CYB561A3-213ENST00000539890 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
CYB561A3-213ENST00000539890 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
CYB561A3-213ENST00000539890 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
CYB561A3-213ENST00000539890 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
CYB561A3-213ENST00000539890 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
CYB561A3-213ENST00000539890 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
CYB561A3-213ENST00000539890 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
CYB561A3-213ENST00000539890 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
CYB561A3-213ENST00000539890 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
CYB561A3-213ENST00000539890 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
CYB561A3-213ENST00000539890 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
CYB561A3-213ENST00000539890 SMARCA4P51532 1647 aa23.14■■□□□ 1.29
CYB561A3-213ENST00000539890 SMARCA2P51531 1590 aa23.05■■□□□ 1.28
CYB561A3-213ENST00000539890 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
CYB561A3-213ENST00000539890 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
CYB561A3-213ENST00000539890 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
CYB561A3-213ENST00000539890 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
CYB561A3-213ENST00000539890 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
CYB561A3-213ENST00000539890 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
CYB561A3-213ENST00000539890 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
CYB561A3-213ENST00000539890 WIZO95785 1651 aa22.75■■□□□ 1.23
CYB561A3-213ENST00000539890 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
CYB561A3-213ENST00000539890 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
CYB561A3-213ENST00000539890 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
CYB561A3-213ENST00000539890 NESP48681 1621 aa22.46■■□□□ 1.19
CYB561A3-213ENST00000539890 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
CYB561A3-213ENST00000539890 LAMC3Q9Y6N6 1575 aa22.41■■□□□ 1.18
CYB561A3-213ENST00000539890 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
CYB561A3-213ENST00000539890 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
CYB561A3-213ENST00000539890 CFTRP13569 1480 aa22.24■■□□□ 1.15
CYB561A3-213ENST00000539890 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
CYB561A3-213ENST00000539890 KIF21AQ7Z4S6 1674 aa22.12■■□□□ 1.13
CYB561A3-213ENST00000539890 CUX2O14529 1486 aa22.12■■□□□ 1.13
CYB561A3-213ENST00000539890 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
CYB561A3-213ENST00000539890 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
CYB561A3-213ENST00000539890 THOC2Q8NI27 1593 aaKnown RBP22■■□□□ 1.11
CYB561A3-213ENST00000539890 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
CYB561A3-213ENST00000539890 WDR62O43379 1518 aa21.9■■□□□ 1.1
CYB561A3-213ENST00000539890 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
CYB561A3-213ENST00000539890 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
CYB561A3-213ENST00000539890 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
CYB561A3-213ENST00000539890 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
CYB561A3-213ENST00000539890 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
CYB561A3-213ENST00000539890 SOGA1O94964 1423 aa21.59■■□□□ 1.05
CYB561A3-213ENST00000539890 CUX1P39880 1505 aa21.58■■□□□ 1.04
CYB561A3-213ENST00000539890 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
CYB561A3-213ENST00000539890 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
CYB561A3-213ENST00000539890 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
CYB561A3-213ENST00000539890 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
CYB561A3-213ENST00000539890 ZNF608Q9ULD9 1512 aaPredicted RBP21.5■■□□□ 1.03
CYB561A3-213ENST00000539890 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
CYB561A3-213ENST00000539890 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
CYB561A3-213ENST00000539890 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.03
CYB561A3-213ENST00000539890 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
CYB561A3-213ENST00000539890 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
CYB561A3-213ENST00000539890 FBLN2P98095 1184 aa21.39■■□□□ 1.01
CYB561A3-213ENST00000539890 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
CYB561A3-213ENST00000539890 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
CYB561A3-213ENST00000539890 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
CYB561A3-213ENST00000539890 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
CYB561A3-213ENST00000539890 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
CYB561A3-213ENST00000539890 WDR97A6NE52 1622 aa21.31■■□□□ 1
CYB561A3-213ENST00000539890 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
CYB561A3-213ENST00000539890 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
CYB561A3-213ENST00000539890 GRIN2BQ13224 1484 aa21.29■■□□□ 1
CYB561A3-213ENST00000539890 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
CYB561A3-213ENST00000539890 SNAPC4Q5SXM2 1469 aa21.23■□□□□ 0.99
CYB561A3-213ENST00000539890 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
CYB561A3-213ENST00000539890 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
CYB561A3-213ENST00000539890 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
CYB561A3-213ENST00000539890 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
CYB561A3-213ENST00000539890 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
CYB561A3-213ENST00000539890 CHD1O14646 1710 aa21.08■□□□□ 0.97
CYB561A3-213ENST00000539890 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
CYB561A3-213ENST00000539890 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
CYB561A3-213ENST00000539890 IGF1RP08069 1367 aa21.01■□□□□ 0.95
CYB561A3-213ENST00000539890 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
CYB561A3-213ENST00000539890 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
CYB561A3-213ENST00000539890 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
CYB561A3-213ENST00000539890 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
CYB561A3-213ENST00000539890 CUL7Q14999 1698 aa20.88■□□□□ 0.93
CYB561A3-213ENST00000539890 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
CYB561A3-213ENST00000539890 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
CYB561A3-213ENST00000539890 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
CYB561A3-213ENST00000539890 NUP160Q12769 1436 aa20.85■□□□□ 0.93
CYB561A3-213ENST00000539890 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
CYB561A3-213ENST00000539890 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.93
CYB561A3-213ENST00000539890 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
CYB561A3-213ENST00000539890 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
CYB561A3-213ENST00000539890 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
CYB561A3-213ENST00000539890 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
CYB561A3-213ENST00000539890 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms